Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A917:A1207
Extra
PDB:
ATOM 1 O3' G A 916 231.635 111.151 -10.823 1.00 43.41 O
ATOM 2 P G A 917 232.956 110.882 -9.947 1.00 47.78 P
ATOM 3 OP1 G A 917 232.615 109.911 -8.871 1.00 52.48 O
ATOM 4 OP2 G A 917 233.545 112.193 -9.592 1.00 52.48 O
ATOM 5 O5' G A 917 233.936 110.092 -10.920 1.00 47.78 O
ATOM 6 C5' G A 917 234.321 110.654 -12.167 1.00 47.78 C
ATOM 7 C4' G A 917 235.617 110.055 -12.646 1.00 47.78 C
ATOM 8 O4' G A 917 236.005 110.882 -13.764 1.00 47.78 O
ATOM 9 C3' G A 917 236.769 110.128 -11.651 1.00 47.78 C
ATOM 10 O3' G A 917 237.009 108.854 -11.054 1.00 47.78 O
ATOM 11 C2' G A 917 237.953 110.540 -12.505 1.00 47.78 C
ATOM 12 O2' G A 917 238.528 109.432 -13.168 1.00 47.78 O
ATOM 13 C1' G A 917 237.278 111.431 -13.544 1.00 47.78 C
ATOM 14 N9 G A 917 237.081 112.830 -13.172 1.00 52.48 N
ATOM 15 C8 G A 917 235.926 113.559 -13.317 1.00 52.48 C
ATOM 16 N7 G A 917 236.045 114.795 -12.921 1.00 52.48 N
ATOM 17 C5 G A 917 237.355 114.890 -12.487 1.00 52.48 C
ATOM 18 C6 G A 917 238.054 115.985 -11.963 1.00 52.48 C
ATOM 19 O6 G A 917 237.651 117.137 -11.798 1.00 52.48 O
ATOM 20 N1 G A 917 239.362 115.644 -11.621 1.00 52.48 N
ATOM 21 C2 G A 917 239.923 114.400 -11.779 1.00 52.48 C
ATOM 22 N2 G A 917 241.183 114.250 -11.360 1.00 52.48 N
ATOM 23 N3 G A 917 239.283 113.372 -12.298 1.00 52.48 N
ATOM 24 C4 G A 917 238.008 113.684 -12.624 1.00 52.48 C
ATOM 25 P A A 918 237.550 108.779 -9.539 1.00 51.65 P
ATOM 26 OP1 A A 918 238.036 107.402 -9.247 1.00 49.65 O
ATOM 27 OP2 A A 918 236.477 109.369 -8.692 1.00 49.65 O
ATOM 28 O5' A A 918 238.797 109.778 -9.535 1.00 51.65 O
TER
ATOM 1 O3' U B1206 243.849 124.629 -2.977 1.00 56.02 O
ATOM 2 P A B1207 244.263 125.309 -4.375 1.00 51.70 P
ATOM 3 OP1 A B1207 245.346 126.269 -4.044 1.00 53.08 O
ATOM 4 OP2 A B1207 243.050 125.796 -5.084 1.00 53.08 O
ATOM 5 O5' A B1207 244.905 124.089 -5.177 1.00 51.70 O
ATOM 6 C5' A B1207 244.906 124.023 -6.618 1.00 51.70 C
ATOM 7 C4' A B1207 245.323 122.634 -7.044 1.00 51.70 C
ATOM 8 O4' A B1207 244.306 121.690 -6.603 1.00 51.70 O
ATOM 9 C3' A B1207 245.500 122.340 -8.528 1.00 51.70 C
ATOM 10 O3' A B1207 246.798 122.712 -9.009 1.00 51.70 O
ATOM 11 C2' A B1207 245.326 120.826 -8.566 1.00 51.70 C
ATOM 12 O2' A B1207 246.504 120.188 -8.129 1.00 51.70 O
ATOM 13 C1' A B1207 244.240 120.598 -7.507 1.00 51.70 C
ATOM 14 N9 A B1207 242.887 120.528 -8.083 1.00 53.08 N
ATOM 15 C8 A B1207 241.953 121.534 -8.164 1.00 53.08 C
ATOM 16 N7 A B1207 240.861 121.193 -8.806 1.00 53.08 N
ATOM 17 C5 A B1207 241.081 119.870 -9.160 1.00 53.08 C
ATOM 18 C6 A B1207 240.307 118.944 -9.878 1.00 53.08 C
ATOM 19 N6 A B1207 239.127 119.229 -10.421 1.00 53.08 N
ATOM 20 N1 A B1207 240.799 117.705 -10.034 1.00 53.08 N
ATOM 21 C2 A B1207 241.998 117.425 -9.525 1.00 53.08 C
ATOM 22 N3 A B1207 242.835 118.211 -8.852 1.00 53.08 N
ATOM 23 C4 A B1207 242.312 119.438 -8.699 1.00 53.08 C
ATOM 24 P C B1208 246.935 123.641 -10.324 1.00 58.53 P
ATOM 25 OP1 C B1208 248.128 124.479 -10.116 1.00 52.09 O
ATOM 26 OP2 C B1208 245.641 124.294 -10.674 1.00 52.09 O
ATOM 27 O5' C B1208 247.262 122.617 -11.493 1.00 58.53 O
TER
ATOM 2 P G A 917 232.956 110.882 -9.947 1.00 47.78 P
ATOM 3 OP1 G A 917 232.615 109.911 -8.871 1.00 52.48 O
ATOM 4 OP2 G A 917 233.545 112.193 -9.592 1.00 52.48 O
ATOM 5 O5' G A 917 233.936 110.092 -10.920 1.00 47.78 O
ATOM 6 C5' G A 917 234.321 110.654 -12.167 1.00 47.78 C
ATOM 7 C4' G A 917 235.617 110.055 -12.646 1.00 47.78 C
ATOM 8 O4' G A 917 236.005 110.882 -13.764 1.00 47.78 O
ATOM 9 C3' G A 917 236.769 110.128 -11.651 1.00 47.78 C
ATOM 10 O3' G A 917 237.009 108.854 -11.054 1.00 47.78 O
ATOM 11 C2' G A 917 237.953 110.540 -12.505 1.00 47.78 C
ATOM 12 O2' G A 917 238.528 109.432 -13.168 1.00 47.78 O
ATOM 13 C1' G A 917 237.278 111.431 -13.544 1.00 47.78 C
ATOM 14 N9 G A 917 237.081 112.830 -13.172 1.00 52.48 N
ATOM 15 C8 G A 917 235.926 113.559 -13.317 1.00 52.48 C
ATOM 16 N7 G A 917 236.045 114.795 -12.921 1.00 52.48 N
ATOM 17 C5 G A 917 237.355 114.890 -12.487 1.00 52.48 C
ATOM 18 C6 G A 917 238.054 115.985 -11.963 1.00 52.48 C
ATOM 19 O6 G A 917 237.651 117.137 -11.798 1.00 52.48 O
ATOM 20 N1 G A 917 239.362 115.644 -11.621 1.00 52.48 N
ATOM 21 C2 G A 917 239.923 114.400 -11.779 1.00 52.48 C
ATOM 22 N2 G A 917 241.183 114.250 -11.360 1.00 52.48 N
ATOM 23 N3 G A 917 239.283 113.372 -12.298 1.00 52.48 N
ATOM 24 C4 G A 917 238.008 113.684 -12.624 1.00 52.48 C
ATOM 25 P A A 918 237.550 108.779 -9.539 1.00 51.65 P
ATOM 26 OP1 A A 918 238.036 107.402 -9.247 1.00 49.65 O
ATOM 27 OP2 A A 918 236.477 109.369 -8.692 1.00 49.65 O
ATOM 28 O5' A A 918 238.797 109.778 -9.535 1.00 51.65 O
TER
ATOM 1 O3' U B1206 243.849 124.629 -2.977 1.00 56.02 O
ATOM 2 P A B1207 244.263 125.309 -4.375 1.00 51.70 P
ATOM 3 OP1 A B1207 245.346 126.269 -4.044 1.00 53.08 O
ATOM 4 OP2 A B1207 243.050 125.796 -5.084 1.00 53.08 O
ATOM 5 O5' A B1207 244.905 124.089 -5.177 1.00 51.70 O
ATOM 6 C5' A B1207 244.906 124.023 -6.618 1.00 51.70 C
ATOM 7 C4' A B1207 245.323 122.634 -7.044 1.00 51.70 C
ATOM 8 O4' A B1207 244.306 121.690 -6.603 1.00 51.70 O
ATOM 9 C3' A B1207 245.500 122.340 -8.528 1.00 51.70 C
ATOM 10 O3' A B1207 246.798 122.712 -9.009 1.00 51.70 O
ATOM 11 C2' A B1207 245.326 120.826 -8.566 1.00 51.70 C
ATOM 12 O2' A B1207 246.504 120.188 -8.129 1.00 51.70 O
ATOM 13 C1' A B1207 244.240 120.598 -7.507 1.00 51.70 C
ATOM 14 N9 A B1207 242.887 120.528 -8.083 1.00 53.08 N
ATOM 15 C8 A B1207 241.953 121.534 -8.164 1.00 53.08 C
ATOM 16 N7 A B1207 240.861 121.193 -8.806 1.00 53.08 N
ATOM 17 C5 A B1207 241.081 119.870 -9.160 1.00 53.08 C
ATOM 18 C6 A B1207 240.307 118.944 -9.878 1.00 53.08 C
ATOM 19 N6 A B1207 239.127 119.229 -10.421 1.00 53.08 N
ATOM 20 N1 A B1207 240.799 117.705 -10.034 1.00 53.08 N
ATOM 21 C2 A B1207 241.998 117.425 -9.525 1.00 53.08 C
ATOM 22 N3 A B1207 242.835 118.211 -8.852 1.00 53.08 N
ATOM 23 C4 A B1207 242.312 119.438 -8.699 1.00 53.08 C
ATOM 24 P C B1208 246.935 123.641 -10.324 1.00 58.53 P
ATOM 25 OP1 C B1208 248.128 124.479 -10.116 1.00 52.09 O
ATOM 26 OP2 C B1208 245.641 124.294 -10.674 1.00 52.09 O
ATOM 27 O5' C B1208 247.262 122.617 -11.493 1.00 58.53 O
TER
Atoms:
OP1: (232.615,109.911,-8.871)
OP2: (233.545,112.193,-9.592)
C3': (236.769,110.128,-11.651)
C1': (237.278,111.431,-13.544)
C5': (234.321,110.654,-12.167)
O6: (237.651,117.137,-11.798)
O4': (236.005,110.882,-13.764)
C8: (235.926,113.559,-13.317)
C2: (239.923,114.400,-11.779)
C6: (238.054,115.985,-11.963)
C5: (237.355,114.890,-12.487)
C4: (238.008,113.684,-12.624)
P: (232.956,110.882,-9.947)
C4': (235.617,110.055,-12.646)
C2': (237.953,110.540,-12.505)
O2': (238.528,109.432,-13.168)
N1: (239.362,115.644,-11.621)
N2: (241.183,114.250,-11.360)
N3: (239.283,113.372,-12.298)
N7: (236.045,114.795,-12.921)
N9: (237.081,112.830,-13.172)
O5': (233.936,110.092,-10.920)
O3': (237.009,108.854,-11.054)
OP2: (233.545,112.193,-9.592)
C3': (236.769,110.128,-11.651)
C1': (237.278,111.431,-13.544)
C5': (234.321,110.654,-12.167)
O6: (237.651,117.137,-11.798)
O4': (236.005,110.882,-13.764)
C8: (235.926,113.559,-13.317)
C2: (239.923,114.400,-11.779)
C6: (238.054,115.985,-11.963)
C5: (237.355,114.890,-12.487)
C4: (238.008,113.684,-12.624)
P: (232.956,110.882,-9.947)
C4': (235.617,110.055,-12.646)
C2': (237.953,110.540,-12.505)
O2': (238.528,109.432,-13.168)
N1: (239.362,115.644,-11.621)
N2: (241.183,114.250,-11.360)
N3: (239.283,113.372,-12.298)
N7: (236.045,114.795,-12.921)
N9: (237.081,112.830,-13.172)
O5': (233.936,110.092,-10.920)
O3': (237.009,108.854,-11.054)
OP1: (245.346,126.269,-4.044)
OP2: (243.050,125.796,-5.084)
C3': (245.500,122.340,-8.528)
C1': (244.240,120.598,-7.507)
C5': (244.906,124.023,-6.618)
O4': (244.306,121.690,-6.603)
C8: (241.953,121.534,-8.164)
O2': (246.504,120.188,-8.129)
C6: (240.307,118.944,-9.878)
C5: (241.081,119.870,-9.160)
C4: (242.312,119.438,-8.699)
P: (244.263,125.309,-4.375)
C4': (245.323,122.634,-7.044)
C2': (245.326,120.826,-8.566)
C2: (241.998,117.425,-9.525)
N1: (240.799,117.705,-10.034)
N3: (242.835,118.211,-8.852)
N6: (239.127,119.229,-10.421)
N7: (240.861,121.193,-8.806)
N9: (242.887,120.528,-8.083)
O5': (244.905,124.089,-5.177)
O3': (246.798,122.712,-9.009)
OP2: (243.050,125.796,-5.084)
C3': (245.500,122.340,-8.528)
C1': (244.240,120.598,-7.507)
C5': (244.906,124.023,-6.618)
O4': (244.306,121.690,-6.603)
C8: (241.953,121.534,-8.164)
O2': (246.504,120.188,-8.129)
C6: (240.307,118.944,-9.878)
C5: (241.081,119.870,-9.160)
C4: (242.312,119.438,-8.699)
P: (244.263,125.309,-4.375)
C4': (245.323,122.634,-7.044)
C2': (245.326,120.826,-8.566)
C2: (241.998,117.425,-9.525)
N1: (240.799,117.705,-10.034)
N3: (242.835,118.211,-8.852)
N6: (239.127,119.229,-10.421)
N7: (240.861,121.193,-8.806)
N9: (242.887,120.528,-8.083)
O5': (244.905,124.089,-5.177)
O3': (246.798,122.712,-9.009)
Image (generated by PyMOL):