ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DJ0:A140:A161

Extra

PDB:
ATOM 1 O3' U A 139 43.324 18.248 22.999 1.00 24.87 O
ATOM 2 P G A 140 44.169 16.916 22.724 1.00 22.89 P
ATOM 3 OP1 G A 140 44.956 16.657 23.949 1.00 24.03 O
ATOM 4 OP2 G A 140 44.869 16.987 21.423 1.00 23.45 O
ATOM 5 O5' G A 140 43.014 15.829 22.585 1.00 22.52 O
ATOM 6 C5' G A 140 42.084 15.621 23.638 1.00 21.93 C
ATOM 7 C4' G A 140 40.813 15.010 23.094 1.00 22.57 C
ATOM 8 O4' G A 140 40.178 15.942 22.180 1.00 23.02 O
ATOM 9 C3' G A 140 41.022 13.780 22.230 1.00 22.31 C
ATOM 10 O3' G A 140 41.306 12.617 23.008 1.00 22.62 O
ATOM 11 C2' G A 140 39.699 13.732 21.472 1.00 22.71 C
ATOM 12 O2' G A 140 38.615 13.195 22.206 1.00 23.09 O
ATOM 13 C1' G A 140 39.469 15.215 21.197 1.00 22.76 C
ATOM 14 N9 G A 140 39.929 15.576 19.857 1.00 22.99 N
ATOM 15 C8 G A 140 41.098 16.204 19.501 1.00 22.84 C
ATOM 16 N7 G A 140 41.209 16.371 18.210 1.00 23.00 N
ATOM 17 C5 G A 140 40.050 15.819 17.680 1.00 22.09 C
ATOM 18 C6 G A 140 39.612 15.700 16.339 1.00 21.96 C
ATOM 19 O6 G A 140 40.188 16.083 15.322 1.00 22.42 O
ATOM 20 N1 G A 140 38.376 15.072 16.227 1.00 22.04 N
ATOM 21 C2 G A 140 37.650 14.607 17.301 1.00 22.13 C
ATOM 22 N2 G A 140 36.474 14.015 17.038 1.00 22.31 N
ATOM 23 N3 G A 140 38.053 14.712 18.562 1.00 21.81 N
ATOM 24 C4 G A 140 39.256 15.322 18.680 1.00 22.06 C
ATOM 25 P U A 141 42.285 11.498 22.405 1.00 22.62 P
ATOM 26 OP1 U A 141 42.552 10.463 23.423 1.00 21.70 O
ATOM 27 OP2 U A 141 43.425 12.202 21.761 1.00 23.02 O
ATOM 28 O5' U A 141 41.402 10.874 21.231 1.00 22.96 O
TER

ATOM 1 O3' G B 160 36.157 13.242 5.448 1.00 30.87 O
ATOM 2 P A B 161 35.105 14.408 5.757 1.00 31.81 P
ATOM 3 OP1 A B 161 34.243 14.574 4.555 1.00 32.33 O
ATOM 4 OP2 A B 161 35.832 15.577 6.314 1.00 31.18 O
ATOM 5 O5' A B 161 34.215 13.783 6.928 1.00 31.44 O
ATOM 6 C5' A B 161 33.646 12.483 6.768 1.00 31.38 C
ATOM 7 C4' A B 161 33.395 11.834 8.121 1.00 31.15 C
ATOM 8 O4' A B 161 34.513 12.035 9.034 1.00 30.54 O
ATOM 9 C3' A B 161 32.178 12.364 8.860 1.00 30.51 C
ATOM 10 O3' A B 161 31.683 11.318 9.661 1.00 30.33 O
ATOM 11 C2' A B 161 32.801 13.460 9.709 1.00 30.21 C
ATOM 12 O2' A B 161 31.961 13.827 10.778 1.00 31.11 O
ATOM 13 C1' A B 161 34.080 12.757 10.168 1.00 30.43 C
ATOM 14 N9 A B 161 35.161 13.653 10.575 1.00 30.75 N
ATOM 15 C8 A B 161 35.723 14.651 9.823 1.00 31.19 C
ATOM 16 N7 A B 161 36.680 15.307 10.436 1.00 30.69 N
ATOM 17 C5 A B 161 36.755 14.695 11.671 1.00 30.24 C
ATOM 18 C6 A B 161 37.571 14.933 12.791 1.00 30.56 C
ATOM 19 N6 A B 161 38.503 15.887 12.813 1.00 30.32 N
ATOM 20 N1 A B 161 37.403 14.145 13.881 1.00 30.72 N
ATOM 21 C2 A B 161 36.469 13.185 13.846 1.00 30.31 C
ATOM 22 N3 A B 161 35.640 12.875 12.845 1.00 30.97 N
ATOM 23 C4 A B 161 35.833 13.672 11.776 1.00 30.35 C
ATOM 24 P G B 162 30.128 10.976 9.762 1.00 29.50 P
ATOM 25 OP1 G B 162 29.845 9.853 8.843 1.00 29.76 O
ATOM 26 OP2 G B 162 29.362 12.239 9.674 1.00 29.31 O
ATOM 27 O5' G B 162 30.012 10.392 11.246 1.00 28.72 O
TER

Atoms:
OP1: (44.956,16.657,23.949)
OP2: (44.869,16.987,21.423)
C3': (41.022,13.780,22.230)
C1': (39.469,15.215,21.197)
C5': (42.084,15.621,23.638)
O6: (40.188,16.083,15.322)
O4': (40.178,15.942,22.180)
C8: (41.098,16.204,19.501)
C2: (37.650,14.607,17.301)
C6: (39.612,15.700,16.339)
C5: (40.050,15.819,17.680)
C4: (39.256,15.322,18.680)
P: (44.169,16.916,22.724)
C4': (40.813,15.010,23.094)
C2': (39.699,13.732,21.472)
O2': (38.615,13.195,22.206)
N1: (38.376,15.072,16.227)
N2: (36.474,14.015,17.038)
N3: (38.053,14.712,18.562)
N7: (41.209,16.371,18.210)
N9: (39.929,15.576,19.857)
O5': (43.014,15.829,22.585)
O3': (41.306,12.617,23.008)
OP1: (34.243,14.574,4.555)
OP2: (35.832,15.577,6.314)
C3': (32.178,12.364,8.860)
C1': (34.080,12.757,10.168)
C5': (33.646,12.483,6.768)
O4': (34.513,12.035,9.034)
C8: (35.723,14.651,9.823)
O2': (31.961,13.827,10.778)
C6: (37.571,14.933,12.791)
C5: (36.755,14.695,11.671)
C4: (35.833,13.672,11.776)
P: (35.105,14.408,5.757)
C4': (33.395,11.834,8.121)
C2': (32.801,13.460,9.709)
C2: (36.469,13.185,13.846)
N1: (37.403,14.145,13.881)
N3: (35.640,12.875,12.845)
N6: (38.503,15.887,12.813)
N7: (36.680,15.307,10.436)
N9: (35.161,13.653,10.575)
O5': (34.215,13.783,6.928)
O3': (31.683,11.318,9.661)
Image (generated by PyMOL):
PyMOL image
show in jmol