ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:295:2386

Extra

PDB:
ATOM 1 O3' G A 94 -59.257 65.765 55.777 1.00 74.37 O
ATOM 2 P G A 95 -59.535 64.275 56.259 1.00 73.95 P
ATOM 3 OP1 G A 95 -60.916 63.926 55.839 1.00 74.72 O
ATOM 4 OP2 G A 95 -59.194 64.217 57.692 1.00 73.22 O
ATOM 5 O5' G A 95 -58.485 63.434 55.415 1.00 73.42 O
ATOM 6 C5' G A 95 -58.772 63.018 54.086 1.00 73.94 C
ATOM 7 C4' G A 95 -57.520 62.589 53.349 1.00 73.46 C
ATOM 8 O4' G A 95 -56.469 63.575 53.552 1.00 73.21 O
ATOM 9 C3' G A 95 -56.875 61.281 53.790 1.00 72.49 C
ATOM 10 O3' G A 95 -57.518 60.127 53.264 1.00 72.64 O
ATOM 11 C2' G A 95 -55.453 61.459 53.284 1.00 72.07 C
ATOM 12 O2' G A 95 -55.411 61.294 51.874 1.00 72.60 O
ATOM 13 C1' G A 95 -55.211 62.935 53.605 1.00 72.35 C
ATOM 14 N9 G A 95 -54.654 63.113 54.965 1.00 71.61 N
ATOM 15 C8 G A 95 -55.229 63.727 56.052 1.00 71.69 C
ATOM 16 N7 G A 95 -54.492 63.710 57.128 1.00 70.94 N
ATOM 17 C5 G A 95 -53.349 63.021 56.724 1.00 70.32 C
ATOM 18 C6 G A 95 -52.163 62.656 57.442 1.00 69.42 C
ATOM 19 O6 G A 95 -51.912 62.892 58.647 1.00 68.99 O
ATOM 20 N1 G A 95 -51.246 61.955 56.637 1.00 69.08 N
ATOM 21 C2 G A 95 -51.460 61.652 55.313 1.00 69.55 C
ATOM 22 N2 G A 95 -50.542 60.967 54.629 1.00 69.20 N
ATOM 23 N3 G A 95 -52.545 61.999 54.662 1.00 70.39 N
ATOM 24 C4 G A 95 -53.445 62.657 55.408 1.00 70.73 C
ATOM 25 P C A 96 -57.920 58.883 54.229 1.00 63.99 P
ATOM 26 OP1 C A 96 -59.125 58.259 53.626 1.00 64.65 O
ATOM 27 OP2 C A 96 -58.002 59.390 55.628 1.00 63.64 O
ATOM 28 O5' C A 96 -56.674 57.899 54.100 1.00 63.12 O
TER

ATOM 1 O3' G B 385 -42.541 59.212 63.050 1.00 58.63 O
ATOM 2 P A B 386 -41.999 60.531 62.331 1.00 58.69 P
ATOM 3 OP1 A B 386 -40.617 60.790 62.857 1.00 58.25 O
ATOM 4 OP2 A B 386 -43.006 61.555 62.502 1.00 59.27 O
ATOM 5 O5' A B 386 -41.930 60.103 60.810 1.00 58.95 O
ATOM 6 C5' A B 386 -41.404 58.846 60.427 1.00 58.53 C
ATOM 7 C4' A B 386 -41.950 58.421 59.094 1.00 58.96 C
ATOM 8 O4' A B 386 -43.395 58.496 59.131 1.00 59.40 O
ATOM 9 C3' A B 386 -41.527 59.280 57.914 1.00 59.47 C
ATOM 10 O3' A B 386 -41.553 58.489 56.742 1.00 59.63 O
ATOM 11 C2' A B 386 -42.644 60.280 57.809 1.00 60.14 C
ATOM 12 O2' A B 386 -42.769 60.838 56.524 1.00 60.80 O
ATOM 13 C1' A B 386 -43.850 59.414 58.156 1.00 60.13 C
ATOM 14 N9 A B 386 -44.970 60.177 58.707 1.00 60.55 N
ATOM 15 C8 A B 386 -44.903 61.097 59.727 1.00 60.51 C
ATOM 16 N7 A B 386 -46.053 61.670 60.008 1.00 61.00 N
ATOM 17 C5 A B 386 -46.955 61.092 59.078 1.00 61.41 C
ATOM 18 C6 A B 386 -48.349 61.250 58.801 1.00 62.06 C
ATOM 19 N6 A B 386 -49.162 62.076 59.434 1.00 62.44 N
ATOM 20 N1 A B 386 -48.915 60.510 57.842 1.00 62.35 N
ATOM 21 C2 A B 386 -48.142 59.676 57.170 1.00 62.02 C
ATOM 22 N3 A B 386 -46.845 59.437 57.316 1.00 61.43 N
ATOM 23 C4 A B 386 -46.285 60.167 58.291 1.00 61.13 C
ATOM 24 P G B 387 -40.318 58.479 55.743 1.00 63.46 P
ATOM 25 OP1 G B 387 -39.442 59.607 56.107 1.00 63.43 O
ATOM 26 OP2 G B 387 -40.880 58.428 54.381 1.00 64.09 O
ATOM 27 O5' G B 387 -39.622 57.097 56.105 1.00 62.75 O
TER

Atoms:
OP1: (-60.916,63.926,55.839)
OP2: (-59.194,64.217,57.692)
C3': (-56.875,61.281,53.790)
C1': (-55.211,62.935,53.605)
C5': (-58.772,63.018,54.086)
O6: (-51.912,62.892,58.647)
O4': (-56.469,63.575,53.552)
C8: (-55.229,63.727,56.052)
C2: (-51.460,61.652,55.313)
C6: (-52.163,62.656,57.442)
C5: (-53.349,63.021,56.724)
C4: (-53.445,62.657,55.408)
P: (-59.535,64.275,56.259)
C4': (-57.520,62.589,53.349)
C2': (-55.453,61.459,53.284)
O2': (-55.411,61.294,51.874)
N1: (-51.246,61.955,56.637)
N2: (-50.542,60.967,54.629)
N3: (-52.545,61.999,54.662)
N7: (-54.492,63.710,57.128)
N9: (-54.654,63.113,54.965)
O5': (-58.485,63.434,55.415)
O3': (-57.518,60.127,53.264)
OP1: (-40.617,60.790,62.857)
OP2: (-43.006,61.555,62.502)
C3': (-41.527,59.280,57.914)
C1': (-43.850,59.414,58.156)
C5': (-41.404,58.846,60.427)
O4': (-43.395,58.496,59.131)
C8: (-44.903,61.097,59.727)
O2': (-42.769,60.838,56.524)
C6: (-48.349,61.250,58.801)
C5: (-46.955,61.092,59.078)
C4: (-46.285,60.167,58.291)
P: (-41.999,60.531,62.331)
C4': (-41.950,58.421,59.094)
C2': (-42.644,60.280,57.809)
C2: (-48.142,59.676,57.170)
N1: (-48.915,60.510,57.842)
N3: (-46.845,59.437,57.316)
N6: (-49.162,62.076,59.434)
N7: (-46.053,61.670,60.008)
N9: (-44.970,60.177,58.707)
O5': (-41.930,60.103,60.810)
O3': (-41.553,58.489,56.742)
Image (generated by PyMOL):
PyMOL image
show in jmol