Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2612:A2640
Extra
PDB:
ATOM 1 O3' G A2611 39.199 128.109 153.649 1.00 66.38 O
ATOM 2 P G A2612 39.878 126.780 154.246 1.00 62.42 P
ATOM 3 OP1 G A2612 38.854 126.093 155.067 1.00 62.51 O
ATOM 4 OP2 G A2612 41.164 127.174 154.855 1.00 61.95 O
ATOM 5 O5' G A2612 40.186 125.913 152.950 1.00 60.46 O
ATOM 6 C5' G A2612 39.154 125.689 151.978 1.00 56.59 C
ATOM 7 C4' G A2612 39.724 125.113 150.703 1.00 55.15 C
ATOM 8 O4' G A2612 40.499 126.094 149.971 1.00 55.44 O
ATOM 9 C3' G A2612 40.675 123.948 150.841 1.00 53.20 C
ATOM 10 O3' G A2612 39.943 122.762 151.093 1.00 51.79 O
ATOM 11 C2' G A2612 41.334 123.932 149.467 1.00 52.89 C
ATOM 12 O2' G A2612 40.478 123.388 148.483 1.00 52.85 O
ATOM 13 C1' G A2612 41.486 125.430 149.194 1.00 54.01 C
ATOM 14 N9 G A2612 42.790 125.913 149.621 1.00 54.06 N
ATOM 15 C8 G A2612 43.075 126.518 150.820 1.00 55.04 C
ATOM 16 N7 G A2612 44.336 126.811 150.960 1.00 55.49 N
ATOM 17 C5 G A2612 44.921 126.392 149.774 1.00 54.13 C
ATOM 18 C6 G A2612 46.262 126.455 149.362 1.00 53.64 C
ATOM 19 O6 G A2612 47.224 126.909 149.981 1.00 53.32 O
ATOM 20 N1 G A2612 46.436 125.913 148.095 1.00 53.40 N
ATOM 21 C2 G A2612 45.440 125.370 147.327 1.00 52.21 C
ATOM 22 N2 G A2612 45.821 124.883 146.143 1.00 51.79 N
ATOM 23 N3 G A2612 44.168 125.307 147.699 1.00 52.27 N
ATOM 24 C4 G A2612 43.982 125.836 148.930 1.00 53.83 C
ATOM 25 P U A2613 40.717 121.460 151.597 1.00 51.07 P
ATOM 26 OP1 U A2613 39.717 120.389 151.795 1.00 50.45 O
ATOM 27 OP2 U A2613 41.596 121.872 152.721 1.00 50.33 O
ATOM 28 O5' U A2613 41.628 121.076 150.349 1.00 50.31 O
TER
ATOM 1 O3' A B2639 54.267 131.805 144.191 1.00 47.79 O
ATOM 2 P A B2640 52.760 131.344 143.886 1.00 50.52 P
ATOM 3 OP1 A B2640 52.283 132.236 142.811 1.00 51.68 O
ATOM 4 OP2 A B2640 52.002 131.253 145.158 1.00 48.77 O
ATOM 5 O5' A B2640 52.904 129.865 143.307 1.00 50.61 O
ATOM 6 C5' A B2640 53.443 129.620 141.997 1.00 51.46 C
ATOM 7 C4' A B2640 52.973 128.277 141.494 1.00 52.77 C
ATOM 8 O4' A B2640 53.421 127.250 142.417 1.00 52.59 O
ATOM 9 C3' A B2640 51.464 128.125 141.419 1.00 53.85 C
ATOM 10 O3' A B2640 51.007 128.519 140.130 1.00 52.50 O
ATOM 11 C2' A B2640 51.251 126.641 141.715 1.00 54.70 C
ATOM 12 O2' A B2640 51.504 125.808 140.597 1.00 57.17 O
ATOM 13 C1' A B2640 52.345 126.391 142.755 1.00 54.21 C
ATOM 14 N9 A B2640 51.965 126.678 144.142 1.00 54.39 N
ATOM 15 C8 A B2640 52.703 127.417 145.032 1.00 54.92 C
ATOM 16 N7 A B2640 52.139 127.560 146.203 1.00 55.26 N
ATOM 17 C5 A B2640 50.950 126.862 146.084 1.00 54.28 C
ATOM 18 C6 A B2640 49.899 126.650 146.981 1.00 54.24 C
ATOM 19 N6 A B2640 49.879 127.153 148.214 1.00 53.13 N
ATOM 20 N1 A B2640 48.854 125.903 146.563 1.00 54.02 N
ATOM 21 C2 A B2640 48.877 125.416 145.317 1.00 53.84 C
ATOM 22 N3 A B2640 49.807 125.557 144.375 1.00 54.09 N
ATOM 23 C4 A B2640 50.831 126.301 144.825 1.00 53.96 C
ATOM 24 P C B2641 49.818 129.587 139.997 1.00 53.57 P
ATOM 25 OP1 C B2641 49.563 129.777 138.546 1.00 53.74 O
ATOM 26 OP2 C B2641 50.124 130.773 140.847 1.00 52.94 O
ATOM 27 O5' C B2641 48.551 128.824 140.595 1.00 51.68 O
TER
ATOM 2 P G A2612 39.878 126.780 154.246 1.00 62.42 P
ATOM 3 OP1 G A2612 38.854 126.093 155.067 1.00 62.51 O
ATOM 4 OP2 G A2612 41.164 127.174 154.855 1.00 61.95 O
ATOM 5 O5' G A2612 40.186 125.913 152.950 1.00 60.46 O
ATOM 6 C5' G A2612 39.154 125.689 151.978 1.00 56.59 C
ATOM 7 C4' G A2612 39.724 125.113 150.703 1.00 55.15 C
ATOM 8 O4' G A2612 40.499 126.094 149.971 1.00 55.44 O
ATOM 9 C3' G A2612 40.675 123.948 150.841 1.00 53.20 C
ATOM 10 O3' G A2612 39.943 122.762 151.093 1.00 51.79 O
ATOM 11 C2' G A2612 41.334 123.932 149.467 1.00 52.89 C
ATOM 12 O2' G A2612 40.478 123.388 148.483 1.00 52.85 O
ATOM 13 C1' G A2612 41.486 125.430 149.194 1.00 54.01 C
ATOM 14 N9 G A2612 42.790 125.913 149.621 1.00 54.06 N
ATOM 15 C8 G A2612 43.075 126.518 150.820 1.00 55.04 C
ATOM 16 N7 G A2612 44.336 126.811 150.960 1.00 55.49 N
ATOM 17 C5 G A2612 44.921 126.392 149.774 1.00 54.13 C
ATOM 18 C6 G A2612 46.262 126.455 149.362 1.00 53.64 C
ATOM 19 O6 G A2612 47.224 126.909 149.981 1.00 53.32 O
ATOM 20 N1 G A2612 46.436 125.913 148.095 1.00 53.40 N
ATOM 21 C2 G A2612 45.440 125.370 147.327 1.00 52.21 C
ATOM 22 N2 G A2612 45.821 124.883 146.143 1.00 51.79 N
ATOM 23 N3 G A2612 44.168 125.307 147.699 1.00 52.27 N
ATOM 24 C4 G A2612 43.982 125.836 148.930 1.00 53.83 C
ATOM 25 P U A2613 40.717 121.460 151.597 1.00 51.07 P
ATOM 26 OP1 U A2613 39.717 120.389 151.795 1.00 50.45 O
ATOM 27 OP2 U A2613 41.596 121.872 152.721 1.00 50.33 O
ATOM 28 O5' U A2613 41.628 121.076 150.349 1.00 50.31 O
TER
ATOM 1 O3' A B2639 54.267 131.805 144.191 1.00 47.79 O
ATOM 2 P A B2640 52.760 131.344 143.886 1.00 50.52 P
ATOM 3 OP1 A B2640 52.283 132.236 142.811 1.00 51.68 O
ATOM 4 OP2 A B2640 52.002 131.253 145.158 1.00 48.77 O
ATOM 5 O5' A B2640 52.904 129.865 143.307 1.00 50.61 O
ATOM 6 C5' A B2640 53.443 129.620 141.997 1.00 51.46 C
ATOM 7 C4' A B2640 52.973 128.277 141.494 1.00 52.77 C
ATOM 8 O4' A B2640 53.421 127.250 142.417 1.00 52.59 O
ATOM 9 C3' A B2640 51.464 128.125 141.419 1.00 53.85 C
ATOM 10 O3' A B2640 51.007 128.519 140.130 1.00 52.50 O
ATOM 11 C2' A B2640 51.251 126.641 141.715 1.00 54.70 C
ATOM 12 O2' A B2640 51.504 125.808 140.597 1.00 57.17 O
ATOM 13 C1' A B2640 52.345 126.391 142.755 1.00 54.21 C
ATOM 14 N9 A B2640 51.965 126.678 144.142 1.00 54.39 N
ATOM 15 C8 A B2640 52.703 127.417 145.032 1.00 54.92 C
ATOM 16 N7 A B2640 52.139 127.560 146.203 1.00 55.26 N
ATOM 17 C5 A B2640 50.950 126.862 146.084 1.00 54.28 C
ATOM 18 C6 A B2640 49.899 126.650 146.981 1.00 54.24 C
ATOM 19 N6 A B2640 49.879 127.153 148.214 1.00 53.13 N
ATOM 20 N1 A B2640 48.854 125.903 146.563 1.00 54.02 N
ATOM 21 C2 A B2640 48.877 125.416 145.317 1.00 53.84 C
ATOM 22 N3 A B2640 49.807 125.557 144.375 1.00 54.09 N
ATOM 23 C4 A B2640 50.831 126.301 144.825 1.00 53.96 C
ATOM 24 P C B2641 49.818 129.587 139.997 1.00 53.57 P
ATOM 25 OP1 C B2641 49.563 129.777 138.546 1.00 53.74 O
ATOM 26 OP2 C B2641 50.124 130.773 140.847 1.00 52.94 O
ATOM 27 O5' C B2641 48.551 128.824 140.595 1.00 51.68 O
TER
Atoms:
OP1: (38.854,126.093,155.067)
OP2: (41.164,127.174,154.855)
C3': (40.675,123.948,150.841)
C1': (41.486,125.430,149.194)
C5': (39.154,125.689,151.978)
O6: (47.224,126.909,149.981)
O4': (40.499,126.094,149.971)
C8: (43.075,126.518,150.820)
C2: (45.440,125.370,147.327)
C6: (46.262,126.455,149.362)
C5: (44.921,126.392,149.774)
C4: (43.982,125.836,148.930)
P: (39.878,126.780,154.246)
C4': (39.724,125.113,150.703)
C2': (41.334,123.932,149.467)
O2': (40.478,123.388,148.483)
N1: (46.436,125.913,148.095)
N2: (45.821,124.883,146.143)
N3: (44.168,125.307,147.699)
N7: (44.336,126.811,150.960)
N9: (42.790,125.913,149.621)
O5': (40.186,125.913,152.950)
O3': (39.943,122.762,151.093)
OP2: (41.164,127.174,154.855)
C3': (40.675,123.948,150.841)
C1': (41.486,125.430,149.194)
C5': (39.154,125.689,151.978)
O6: (47.224,126.909,149.981)
O4': (40.499,126.094,149.971)
C8: (43.075,126.518,150.820)
C2: (45.440,125.370,147.327)
C6: (46.262,126.455,149.362)
C5: (44.921,126.392,149.774)
C4: (43.982,125.836,148.930)
P: (39.878,126.780,154.246)
C4': (39.724,125.113,150.703)
C2': (41.334,123.932,149.467)
O2': (40.478,123.388,148.483)
N1: (46.436,125.913,148.095)
N2: (45.821,124.883,146.143)
N3: (44.168,125.307,147.699)
N7: (44.336,126.811,150.960)
N9: (42.790,125.913,149.621)
O5': (40.186,125.913,152.950)
O3': (39.943,122.762,151.093)
OP1: (52.283,132.236,142.811)
OP2: (52.002,131.253,145.158)
C3': (51.464,128.125,141.419)
C1': (52.345,126.391,142.755)
C5': (53.443,129.620,141.997)
O4': (53.421,127.250,142.417)
C8: (52.703,127.417,145.032)
O2': (51.504,125.808,140.597)
C6: (49.899,126.650,146.981)
C5: (50.950,126.862,146.084)
C4: (50.831,126.301,144.825)
P: (52.760,131.344,143.886)
C4': (52.973,128.277,141.494)
C2': (51.251,126.641,141.715)
C2: (48.877,125.416,145.317)
N1: (48.854,125.903,146.563)
N3: (49.807,125.557,144.375)
N6: (49.879,127.153,148.214)
N7: (52.139,127.560,146.203)
N9: (51.965,126.678,144.142)
O5': (52.904,129.865,143.307)
O3': (51.007,128.519,140.130)
OP2: (52.002,131.253,145.158)
C3': (51.464,128.125,141.419)
C1': (52.345,126.391,142.755)
C5': (53.443,129.620,141.997)
O4': (53.421,127.250,142.417)
C8: (52.703,127.417,145.032)
O2': (51.504,125.808,140.597)
C6: (49.899,126.650,146.981)
C5: (50.950,126.862,146.084)
C4: (50.831,126.301,144.825)
P: (52.760,131.344,143.886)
C4': (52.973,128.277,141.494)
C2': (51.251,126.641,141.715)
C2: (48.877,125.416,145.317)
N1: (48.854,125.903,146.563)
N3: (49.807,125.557,144.375)
N6: (49.879,127.153,148.214)
N7: (52.139,127.560,146.203)
N9: (51.965,126.678,144.142)
O5': (52.904,129.865,143.307)
O3': (51.007,128.519,140.130)
Image (generated by PyMOL):