Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11606:11731
Extra
PDB:
ATOM 1 O3' G A1605 -2.390 36.843 115.011 1.00 62.98 O
ATOM 2 P G A1606 -1.551 38.182 115.307 1.00 60.89 P
ATOM 3 OP1 G A1606 -1.407 38.924 114.021 1.00 60.73 O
ATOM 4 OP2 G A1606 -0.316 37.781 116.031 1.00 60.76 O
ATOM 5 O5' G A1606 -2.533 38.973 116.287 1.00 61.63 O
ATOM 6 C5' G A1606 -3.745 39.505 115.805 1.00 61.89 C
ATOM 7 C4' G A1606 -4.755 39.618 116.900 1.00 62.45 C
ATOM 8 O4' G A1606 -4.855 38.359 117.610 1.00 62.27 O
ATOM 9 C3' G A1606 -4.444 40.611 117.990 1.00 63.07 C
ATOM 10 O3' G A1606 -4.726 41.941 117.624 1.00 63.47 O
ATOM 11 C2' G A1606 -5.308 40.099 119.125 1.00 63.42 C
ATOM 12 O2' G A1606 -6.670 40.397 118.875 1.00 63.72 O
ATOM 13 C1' G A1606 -5.122 38.598 118.968 1.00 62.83 C
ATOM 14 N9 G A1606 -3.984 38.094 119.758 1.00 62.70 N
ATOM 15 C8 G A1606 -2.694 37.907 119.335 1.00 62.26 C
ATOM 16 N7 G A1606 -1.918 37.416 120.271 1.00 62.27 N
ATOM 17 C5 G A1606 -2.744 37.273 121.372 1.00 62.73 C
ATOM 18 C6 G A1606 -2.479 36.794 122.678 1.00 62.98 C
ATOM 19 O6 G A1606 -1.438 36.376 123.186 1.00 62.83 O
ATOM 20 N1 G A1606 -3.628 36.831 123.449 1.00 63.46 N
ATOM 21 C2 G A1606 -4.869 37.242 123.038 1.00 63.69 C
ATOM 22 N2 G A1606 -5.862 37.178 123.941 1.00 64.17 N
ATOM 23 N3 G A1606 -5.114 37.689 121.830 1.00 63.47 N
ATOM 24 C4 G A1606 -4.017 37.681 121.062 1.00 63.00 C
ATOM 25 P C A1607 -3.809 43.117 118.206 1.00 52.12 P
ATOM 26 OP1 C A1607 -4.211 44.367 117.539 1.00 52.44 O
ATOM 27 OP2 C A1607 -2.413 42.683 118.073 1.00 51.66 O
ATOM 28 O5' C A1607 -4.216 43.155 119.742 1.00 52.70 O
TER
ATOM 1 O3' G B1730 0.749 36.184 133.726 1.00 71.26 O
ATOM 2 P A B1731 0.120 34.716 133.854 1.00 66.85 P
ATOM 3 OP1 A B1731 0.301 34.301 135.260 1.00 67.28 O
ATOM 4 OP2 A B1731 0.706 33.861 132.778 1.00 66.05 O
ATOM 5 O5' A B1731 -1.410 35.002 133.568 1.00 67.07 O
ATOM 6 C5' A B1731 -2.091 36.023 134.274 1.00 67.80 C
ATOM 7 C4' A B1731 -3.240 36.581 133.478 1.00 67.84 C
ATOM 8 O4' A B1731 -2.753 37.410 132.390 1.00 67.58 O
ATOM 9 C3' A B1731 -4.126 35.566 132.786 1.00 67.39 C
ATOM 10 O3' A B1731 -5.015 34.944 133.676 1.00 67.72 O
ATOM 11 C2' A B1731 -4.806 36.411 131.710 1.00 67.35 C
ATOM 12 O2' A B1731 -5.854 37.212 132.258 1.00 68.03 O
ATOM 13 C1' A B1731 -3.649 37.328 131.294 1.00 67.28 C
ATOM 14 N9 A B1731 -2.908 36.782 130.144 1.00 66.51 N
ATOM 15 C8 A B1731 -1.795 36.020 130.288 1.00 66.13 C
ATOM 16 N7 A B1731 -1.326 35.661 129.133 1.00 65.49 N
ATOM 17 C5 A B1731 -2.165 36.210 128.182 1.00 65.44 C
ATOM 18 C6 A B1731 -2.141 36.154 126.793 1.00 64.90 C
ATOM 19 N6 A B1731 -1.197 35.505 126.094 1.00 64.27 N
ATOM 20 N1 A B1731 -3.113 36.810 126.149 1.00 65.05 N
ATOM 21 C2 A B1731 -4.019 37.466 126.866 1.00 65.69 C
ATOM 22 N3 A B1731 -4.132 37.582 128.173 1.00 66.24 N
ATOM 23 C4 A B1731 -3.156 36.915 128.788 1.00 66.08 C
ATOM 24 P C B1732 -5.690 33.545 133.304 1.00 71.60 P
ATOM 25 OP1 C B1732 -6.666 33.249 134.431 1.00 72.16 O
ATOM 26 OP2 C B1732 -4.591 32.567 133.017 1.00 70.99 O
ATOM 27 O5' C B1732 -6.468 33.904 131.946 1.00 71.31 O
TER
ATOM 2 P G A1606 -1.551 38.182 115.307 1.00 60.89 P
ATOM 3 OP1 G A1606 -1.407 38.924 114.021 1.00 60.73 O
ATOM 4 OP2 G A1606 -0.316 37.781 116.031 1.00 60.76 O
ATOM 5 O5' G A1606 -2.533 38.973 116.287 1.00 61.63 O
ATOM 6 C5' G A1606 -3.745 39.505 115.805 1.00 61.89 C
ATOM 7 C4' G A1606 -4.755 39.618 116.900 1.00 62.45 C
ATOM 8 O4' G A1606 -4.855 38.359 117.610 1.00 62.27 O
ATOM 9 C3' G A1606 -4.444 40.611 117.990 1.00 63.07 C
ATOM 10 O3' G A1606 -4.726 41.941 117.624 1.00 63.47 O
ATOM 11 C2' G A1606 -5.308 40.099 119.125 1.00 63.42 C
ATOM 12 O2' G A1606 -6.670 40.397 118.875 1.00 63.72 O
ATOM 13 C1' G A1606 -5.122 38.598 118.968 1.00 62.83 C
ATOM 14 N9 G A1606 -3.984 38.094 119.758 1.00 62.70 N
ATOM 15 C8 G A1606 -2.694 37.907 119.335 1.00 62.26 C
ATOM 16 N7 G A1606 -1.918 37.416 120.271 1.00 62.27 N
ATOM 17 C5 G A1606 -2.744 37.273 121.372 1.00 62.73 C
ATOM 18 C6 G A1606 -2.479 36.794 122.678 1.00 62.98 C
ATOM 19 O6 G A1606 -1.438 36.376 123.186 1.00 62.83 O
ATOM 20 N1 G A1606 -3.628 36.831 123.449 1.00 63.46 N
ATOM 21 C2 G A1606 -4.869 37.242 123.038 1.00 63.69 C
ATOM 22 N2 G A1606 -5.862 37.178 123.941 1.00 64.17 N
ATOM 23 N3 G A1606 -5.114 37.689 121.830 1.00 63.47 N
ATOM 24 C4 G A1606 -4.017 37.681 121.062 1.00 63.00 C
ATOM 25 P C A1607 -3.809 43.117 118.206 1.00 52.12 P
ATOM 26 OP1 C A1607 -4.211 44.367 117.539 1.00 52.44 O
ATOM 27 OP2 C A1607 -2.413 42.683 118.073 1.00 51.66 O
ATOM 28 O5' C A1607 -4.216 43.155 119.742 1.00 52.70 O
TER
ATOM 1 O3' G B1730 0.749 36.184 133.726 1.00 71.26 O
ATOM 2 P A B1731 0.120 34.716 133.854 1.00 66.85 P
ATOM 3 OP1 A B1731 0.301 34.301 135.260 1.00 67.28 O
ATOM 4 OP2 A B1731 0.706 33.861 132.778 1.00 66.05 O
ATOM 5 O5' A B1731 -1.410 35.002 133.568 1.00 67.07 O
ATOM 6 C5' A B1731 -2.091 36.023 134.274 1.00 67.80 C
ATOM 7 C4' A B1731 -3.240 36.581 133.478 1.00 67.84 C
ATOM 8 O4' A B1731 -2.753 37.410 132.390 1.00 67.58 O
ATOM 9 C3' A B1731 -4.126 35.566 132.786 1.00 67.39 C
ATOM 10 O3' A B1731 -5.015 34.944 133.676 1.00 67.72 O
ATOM 11 C2' A B1731 -4.806 36.411 131.710 1.00 67.35 C
ATOM 12 O2' A B1731 -5.854 37.212 132.258 1.00 68.03 O
ATOM 13 C1' A B1731 -3.649 37.328 131.294 1.00 67.28 C
ATOM 14 N9 A B1731 -2.908 36.782 130.144 1.00 66.51 N
ATOM 15 C8 A B1731 -1.795 36.020 130.288 1.00 66.13 C
ATOM 16 N7 A B1731 -1.326 35.661 129.133 1.00 65.49 N
ATOM 17 C5 A B1731 -2.165 36.210 128.182 1.00 65.44 C
ATOM 18 C6 A B1731 -2.141 36.154 126.793 1.00 64.90 C
ATOM 19 N6 A B1731 -1.197 35.505 126.094 1.00 64.27 N
ATOM 20 N1 A B1731 -3.113 36.810 126.149 1.00 65.05 N
ATOM 21 C2 A B1731 -4.019 37.466 126.866 1.00 65.69 C
ATOM 22 N3 A B1731 -4.132 37.582 128.173 1.00 66.24 N
ATOM 23 C4 A B1731 -3.156 36.915 128.788 1.00 66.08 C
ATOM 24 P C B1732 -5.690 33.545 133.304 1.00 71.60 P
ATOM 25 OP1 C B1732 -6.666 33.249 134.431 1.00 72.16 O
ATOM 26 OP2 C B1732 -4.591 32.567 133.017 1.00 70.99 O
ATOM 27 O5' C B1732 -6.468 33.904 131.946 1.00 71.31 O
TER
Atoms:
OP1: (-1.407,38.924,114.021)
OP2: (-0.316,37.781,116.031)
C3': (-4.444,40.611,117.990)
C1': (-5.122,38.598,118.968)
C5': (-3.745,39.505,115.805)
O6: (-1.438,36.376,123.186)
O4': (-4.855,38.359,117.610)
C8: (-2.694,37.907,119.335)
C2: (-4.869,37.242,123.038)
C6: (-2.479,36.794,122.678)
C5: (-2.744,37.273,121.372)
C4: (-4.017,37.681,121.062)
P: (-1.551,38.182,115.307)
C4': (-4.755,39.618,116.900)
C2': (-5.308,40.099,119.125)
O2': (-6.670,40.397,118.875)
N1: (-3.628,36.831,123.449)
N2: (-5.862,37.178,123.941)
N3: (-5.114,37.689,121.830)
N7: (-1.918,37.416,120.271)
N9: (-3.984,38.094,119.758)
O5': (-2.533,38.973,116.287)
O3': (-4.726,41.941,117.624)
OP2: (-0.316,37.781,116.031)
C3': (-4.444,40.611,117.990)
C1': (-5.122,38.598,118.968)
C5': (-3.745,39.505,115.805)
O6: (-1.438,36.376,123.186)
O4': (-4.855,38.359,117.610)
C8: (-2.694,37.907,119.335)
C2: (-4.869,37.242,123.038)
C6: (-2.479,36.794,122.678)
C5: (-2.744,37.273,121.372)
C4: (-4.017,37.681,121.062)
P: (-1.551,38.182,115.307)
C4': (-4.755,39.618,116.900)
C2': (-5.308,40.099,119.125)
O2': (-6.670,40.397,118.875)
N1: (-3.628,36.831,123.449)
N2: (-5.862,37.178,123.941)
N3: (-5.114,37.689,121.830)
N7: (-1.918,37.416,120.271)
N9: (-3.984,38.094,119.758)
O5': (-2.533,38.973,116.287)
O3': (-4.726,41.941,117.624)
OP1: (0.301,34.301,135.260)
OP2: (0.706,33.861,132.778)
C3': (-4.126,35.566,132.786)
C1': (-3.649,37.328,131.294)
C5': (-2.091,36.023,134.274)
O4': (-2.753,37.410,132.390)
C8: (-1.795,36.020,130.288)
O2': (-5.854,37.212,132.258)
C6: (-2.141,36.154,126.793)
C5: (-2.165,36.210,128.182)
C4: (-3.156,36.915,128.788)
P: (0.120,34.716,133.854)
C4': (-3.240,36.581,133.478)
C2': (-4.806,36.411,131.710)
C2: (-4.019,37.466,126.866)
N1: (-3.113,36.810,126.149)
N3: (-4.132,37.582,128.173)
N6: (-1.197,35.505,126.094)
N7: (-1.326,35.661,129.133)
N9: (-2.908,36.782,130.144)
O5': (-1.410,35.002,133.568)
O3': (-5.015,34.944,133.676)
OP2: (0.706,33.861,132.778)
C3': (-4.126,35.566,132.786)
C1': (-3.649,37.328,131.294)
C5': (-2.091,36.023,134.274)
O4': (-2.753,37.410,132.390)
C8: (-1.795,36.020,130.288)
O2': (-5.854,37.212,132.258)
C6: (-2.141,36.154,126.793)
C5: (-2.165,36.210,128.182)
C4: (-3.156,36.915,128.788)
P: (0.120,34.716,133.854)
C4': (-3.240,36.581,133.478)
C2': (-4.806,36.411,131.710)
C2: (-4.019,37.466,126.866)
N1: (-3.113,36.810,126.149)
N3: (-4.132,37.582,128.173)
N6: (-1.197,35.505,126.094)
N7: (-1.326,35.661,129.133)
N9: (-2.908,36.782,130.144)
O5': (-1.410,35.002,133.568)
O3': (-5.015,34.944,133.676)
Image (generated by PyMOL):