Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SD3:A83:A4
Extra
PDB:
ATOM 1 O3' C A 82 14.989 -41.565 30.590 1.00 41.08 O
ATOM 2 P G A 83 15.105 -42.246 29.139 1.00 47.54 P
ATOM 3 OP1 G A 83 15.054 -43.714 29.341 1.00 50.12 O
ATOM 4 OP2 G A 83 16.295 -41.660 28.477 1.00 46.16 O
ATOM 5 O5' G A 83 13.780 -41.753 28.406 1.00 38.29 O
ATOM 6 C5' G A 83 12.498 -42.147 28.872 1.00 41.80 C
ATOM 7 C4' G A 83 11.396 -41.417 28.144 1.00 42.99 C
ATOM 8 O4' G A 83 11.624 -39.987 28.219 1.00 43.12 O
ATOM 9 C3' G A 83 11.282 -41.695 26.653 1.00 44.48 C
ATOM 10 O3' G A 83 10.583 -42.893 26.368 1.00 47.06 O
ATOM 11 C2' G A 83 10.583 -40.446 26.129 1.00 45.11 C
ATOM 12 O2' G A 83 9.183 -40.522 26.352 1.00 45.83 O
ATOM 13 C1' G A 83 11.158 -39.362 27.043 1.00 43.23 C
ATOM 14 N9 G A 83 12.279 -38.640 26.413 1.00 41.10 N
ATOM 15 C8 G A 83 13.601 -38.638 26.786 1.00 39.69 C
ATOM 16 N7 G A 83 14.344 -37.880 26.025 1.00 39.47 N
ATOM 17 C5 G A 83 13.457 -37.344 25.099 1.00 40.81 C
ATOM 18 C6 G A 83 13.676 -36.449 24.019 1.00 39.69 C
ATOM 19 O6 G A 83 14.738 -35.929 23.653 1.00 39.99 O
ATOM 20 N1 G A 83 12.493 -36.174 23.337 1.00 37.80 N
ATOM 21 C2 G A 83 11.259 -36.689 23.653 1.00 38.23 C
ATOM 22 N2 G A 83 10.234 -36.308 22.879 1.00 37.05 N
ATOM 23 N3 G A 83 11.044 -37.520 24.656 1.00 39.04 N
ATOM 24 C4 G A 83 12.179 -37.801 25.329 1.00 41.64 C
ATOM 25 P C A 84 10.958 -43.762 25.069 1.00 53.17 P
ATOM 26 OP1 C A 84 10.117 -44.984 25.103 1.00 54.41 O
ATOM 27 OP2 C A 84 12.434 -43.912 25.054 1.00 52.74 O
ATOM 28 O5' C A 84 10.502 -42.825 23.873 1.00 47.09 O
TER
ATOM 1 O3' G B 3 17.376 -32.711 13.012 1.00 44.64 O
ATOM 2 P A B 4 16.785 -31.395 13.713 1.00 43.86 P
ATOM 3 OP1 A B 4 16.775 -30.323 12.691 1.00 45.07 O
ATOM 4 OP2 A B 4 17.557 -31.183 14.962 1.00 39.80 O
ATOM 5 O5' A B 4 15.293 -31.822 14.066 1.00 37.98 O
ATOM 6 C5' A B 4 14.378 -32.209 13.051 1.00 37.27 C
ATOM 7 C4' A B 4 13.056 -32.619 13.645 1.00 38.82 C
ATOM 8 O4' A B 4 13.248 -33.782 14.490 1.00 42.74 O
ATOM 9 C3' A B 4 12.394 -31.585 14.549 1.00 37.78 C
ATOM 10 O3' A B 4 11.609 -30.651 13.821 1.00 37.35 O
ATOM 11 C2' A B 4 11.581 -32.432 15.524 1.00 37.76 C
ATOM 12 O2' A B 4 10.320 -32.770 14.966 1.00 35.99 O
ATOM 13 C1' A B 4 12.424 -33.706 15.628 1.00 40.98 C
ATOM 14 N9 A B 4 13.286 -33.727 16.828 1.00 43.08 N
ATOM 15 C8 A B 4 14.578 -33.269 16.947 1.00 43.63 C
ATOM 16 N7 A B 4 15.106 -33.450 18.136 1.00 43.40 N
ATOM 17 C5 A B 4 14.097 -34.086 18.846 1.00 43.67 C
ATOM 18 C6 A B 4 14.023 -34.555 20.173 1.00 40.77 C
ATOM 19 N6 A B 4 15.019 -34.449 21.058 1.00 36.51 N
ATOM 20 N1 A B 4 12.872 -35.143 20.569 1.00 39.83 N
ATOM 21 C2 A B 4 11.871 -35.252 19.685 1.00 40.56 C
ATOM 22 N3 A B 4 11.818 -34.855 18.415 1.00 44.35 N
ATOM 23 C4 A B 4 12.976 -34.273 18.051 1.00 44.42 C
ATOM 24 P G B 5 11.749 -29.072 14.094 1.00 39.28 P
ATOM 25 OP1 G B 5 11.006 -28.375 13.015 1.00 38.00 O
ATOM 26 OP2 G B 5 13.193 -28.781 14.267 1.00 42.19 O
ATOM 27 O5' G B 5 10.992 -28.884 15.478 1.00 41.15 O
TER
ATOM 2 P G A 83 15.105 -42.246 29.139 1.00 47.54 P
ATOM 3 OP1 G A 83 15.054 -43.714 29.341 1.00 50.12 O
ATOM 4 OP2 G A 83 16.295 -41.660 28.477 1.00 46.16 O
ATOM 5 O5' G A 83 13.780 -41.753 28.406 1.00 38.29 O
ATOM 6 C5' G A 83 12.498 -42.147 28.872 1.00 41.80 C
ATOM 7 C4' G A 83 11.396 -41.417 28.144 1.00 42.99 C
ATOM 8 O4' G A 83 11.624 -39.987 28.219 1.00 43.12 O
ATOM 9 C3' G A 83 11.282 -41.695 26.653 1.00 44.48 C
ATOM 10 O3' G A 83 10.583 -42.893 26.368 1.00 47.06 O
ATOM 11 C2' G A 83 10.583 -40.446 26.129 1.00 45.11 C
ATOM 12 O2' G A 83 9.183 -40.522 26.352 1.00 45.83 O
ATOM 13 C1' G A 83 11.158 -39.362 27.043 1.00 43.23 C
ATOM 14 N9 G A 83 12.279 -38.640 26.413 1.00 41.10 N
ATOM 15 C8 G A 83 13.601 -38.638 26.786 1.00 39.69 C
ATOM 16 N7 G A 83 14.344 -37.880 26.025 1.00 39.47 N
ATOM 17 C5 G A 83 13.457 -37.344 25.099 1.00 40.81 C
ATOM 18 C6 G A 83 13.676 -36.449 24.019 1.00 39.69 C
ATOM 19 O6 G A 83 14.738 -35.929 23.653 1.00 39.99 O
ATOM 20 N1 G A 83 12.493 -36.174 23.337 1.00 37.80 N
ATOM 21 C2 G A 83 11.259 -36.689 23.653 1.00 38.23 C
ATOM 22 N2 G A 83 10.234 -36.308 22.879 1.00 37.05 N
ATOM 23 N3 G A 83 11.044 -37.520 24.656 1.00 39.04 N
ATOM 24 C4 G A 83 12.179 -37.801 25.329 1.00 41.64 C
ATOM 25 P C A 84 10.958 -43.762 25.069 1.00 53.17 P
ATOM 26 OP1 C A 84 10.117 -44.984 25.103 1.00 54.41 O
ATOM 27 OP2 C A 84 12.434 -43.912 25.054 1.00 52.74 O
ATOM 28 O5' C A 84 10.502 -42.825 23.873 1.00 47.09 O
TER
ATOM 1 O3' G B 3 17.376 -32.711 13.012 1.00 44.64 O
ATOM 2 P A B 4 16.785 -31.395 13.713 1.00 43.86 P
ATOM 3 OP1 A B 4 16.775 -30.323 12.691 1.00 45.07 O
ATOM 4 OP2 A B 4 17.557 -31.183 14.962 1.00 39.80 O
ATOM 5 O5' A B 4 15.293 -31.822 14.066 1.00 37.98 O
ATOM 6 C5' A B 4 14.378 -32.209 13.051 1.00 37.27 C
ATOM 7 C4' A B 4 13.056 -32.619 13.645 1.00 38.82 C
ATOM 8 O4' A B 4 13.248 -33.782 14.490 1.00 42.74 O
ATOM 9 C3' A B 4 12.394 -31.585 14.549 1.00 37.78 C
ATOM 10 O3' A B 4 11.609 -30.651 13.821 1.00 37.35 O
ATOM 11 C2' A B 4 11.581 -32.432 15.524 1.00 37.76 C
ATOM 12 O2' A B 4 10.320 -32.770 14.966 1.00 35.99 O
ATOM 13 C1' A B 4 12.424 -33.706 15.628 1.00 40.98 C
ATOM 14 N9 A B 4 13.286 -33.727 16.828 1.00 43.08 N
ATOM 15 C8 A B 4 14.578 -33.269 16.947 1.00 43.63 C
ATOM 16 N7 A B 4 15.106 -33.450 18.136 1.00 43.40 N
ATOM 17 C5 A B 4 14.097 -34.086 18.846 1.00 43.67 C
ATOM 18 C6 A B 4 14.023 -34.555 20.173 1.00 40.77 C
ATOM 19 N6 A B 4 15.019 -34.449 21.058 1.00 36.51 N
ATOM 20 N1 A B 4 12.872 -35.143 20.569 1.00 39.83 N
ATOM 21 C2 A B 4 11.871 -35.252 19.685 1.00 40.56 C
ATOM 22 N3 A B 4 11.818 -34.855 18.415 1.00 44.35 N
ATOM 23 C4 A B 4 12.976 -34.273 18.051 1.00 44.42 C
ATOM 24 P G B 5 11.749 -29.072 14.094 1.00 39.28 P
ATOM 25 OP1 G B 5 11.006 -28.375 13.015 1.00 38.00 O
ATOM 26 OP2 G B 5 13.193 -28.781 14.267 1.00 42.19 O
ATOM 27 O5' G B 5 10.992 -28.884 15.478 1.00 41.15 O
TER
Atoms:
OP1: (15.054,-43.714,29.341)
OP2: (16.295,-41.660,28.477)
C3': (11.282,-41.695,26.653)
C1': (11.158,-39.362,27.043)
C5': (12.498,-42.147,28.872)
O6: (14.738,-35.929,23.653)
O4': (11.624,-39.987,28.219)
C8: (13.601,-38.638,26.786)
C2: (11.259,-36.689,23.653)
C6: (13.676,-36.449,24.019)
C5: (13.457,-37.344,25.099)
C4: (12.179,-37.801,25.329)
P: (15.105,-42.246,29.139)
C4': (11.396,-41.417,28.144)
C2': (10.583,-40.446,26.129)
O2': (9.183,-40.522,26.352)
N1: (12.493,-36.174,23.337)
N2: (10.234,-36.308,22.879)
N3: (11.044,-37.520,24.656)
N7: (14.344,-37.880,26.025)
N9: (12.279,-38.640,26.413)
O5': (13.780,-41.753,28.406)
O3': (10.583,-42.893,26.368)
OP2: (16.295,-41.660,28.477)
C3': (11.282,-41.695,26.653)
C1': (11.158,-39.362,27.043)
C5': (12.498,-42.147,28.872)
O6: (14.738,-35.929,23.653)
O4': (11.624,-39.987,28.219)
C8: (13.601,-38.638,26.786)
C2: (11.259,-36.689,23.653)
C6: (13.676,-36.449,24.019)
C5: (13.457,-37.344,25.099)
C4: (12.179,-37.801,25.329)
P: (15.105,-42.246,29.139)
C4': (11.396,-41.417,28.144)
C2': (10.583,-40.446,26.129)
O2': (9.183,-40.522,26.352)
N1: (12.493,-36.174,23.337)
N2: (10.234,-36.308,22.879)
N3: (11.044,-37.520,24.656)
N7: (14.344,-37.880,26.025)
N9: (12.279,-38.640,26.413)
O5': (13.780,-41.753,28.406)
O3': (10.583,-42.893,26.368)
OP1: (16.775,-30.323,12.691)
OP2: (17.557,-31.183,14.962)
C3': (12.394,-31.585,14.549)
C1': (12.424,-33.706,15.628)
C5': (14.378,-32.209,13.051)
O4': (13.248,-33.782,14.490)
C8: (14.578,-33.269,16.947)
O2': (10.320,-32.770,14.966)
C6: (14.023,-34.555,20.173)
C5: (14.097,-34.086,18.846)
C4: (12.976,-34.273,18.051)
P: (16.785,-31.395,13.713)
C4': (13.056,-32.619,13.645)
C2': (11.581,-32.432,15.524)
C2: (11.871,-35.252,19.685)
N1: (12.872,-35.143,20.569)
N3: (11.818,-34.855,18.415)
N6: (15.019,-34.449,21.058)
N7: (15.106,-33.450,18.136)
N9: (13.286,-33.727,16.828)
O5': (15.293,-31.822,14.066)
O3': (11.609,-30.651,13.821)
OP2: (17.557,-31.183,14.962)
C3': (12.394,-31.585,14.549)
C1': (12.424,-33.706,15.628)
C5': (14.378,-32.209,13.051)
O4': (13.248,-33.782,14.490)
C8: (14.578,-33.269,16.947)
O2': (10.320,-32.770,14.966)
C6: (14.023,-34.555,20.173)
C5: (14.097,-34.086,18.846)
C4: (12.976,-34.273,18.051)
P: (16.785,-31.395,13.713)
C4': (13.056,-32.619,13.645)
C2': (11.581,-32.432,15.524)
C2: (11.871,-35.252,19.685)
N1: (12.872,-35.143,20.569)
N3: (11.818,-34.855,18.415)
N6: (15.019,-34.449,21.058)
N7: (15.106,-33.450,18.136)
N9: (13.286,-33.727,16.828)
O5': (15.293,-31.822,14.066)
O3': (11.609,-30.651,13.821)
Image (generated by PyMOL):