Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2D2K:D5:C11
Extra
PDB:
ATOM 1 O3' G A 4 28.611 3.180 39.568 1.00 50.21 O
ATOM 2 P G A 5 27.494 4.325 39.702 1.00 53.80 P
ATOM 3 OP1 G A 5 26.264 3.809 39.044 1.00 49.96 O
ATOM 4 OP2 G A 5 28.094 5.600 39.240 1.00 52.29 O
ATOM 5 O5' G A 5 27.265 4.460 41.271 1.00 47.63 O
ATOM 6 C5' G A 5 27.267 3.310 42.090 1.00 49.07 C
ATOM 7 C4' G A 5 27.650 3.667 43.502 1.00 52.38 C
ATOM 8 O4' G A 5 28.986 4.213 43.525 1.00 51.36 O
ATOM 9 C3' G A 5 26.746 4.752 44.064 1.00 52.83 C
ATOM 10 O3' G A 5 26.414 4.435 45.399 1.00 53.09 O
ATOM 11 C2' G A 5 27.499 6.062 43.893 1.00 51.81 C
ATOM 12 O2' G A 5 27.351 6.880 45.027 1.00 59.14 O
ATOM 13 C1' G A 5 28.939 5.564 43.891 1.00 45.23 C
ATOM 14 N9 G A 5 29.964 6.291 43.171 1.00 40.81 N
ATOM 15 C8 G A 5 29.968 6.692 41.859 1.00 42.60 C
ATOM 16 N7 G A 5 31.054 7.340 41.528 1.00 40.06 N
ATOM 17 C5 G A 5 31.805 7.364 42.698 1.00 41.73 C
ATOM 18 C6 G A 5 33.080 7.936 42.967 1.00 44.06 C
ATOM 19 O6 G A 5 33.821 8.574 42.196 1.00 49.10 O
ATOM 20 N1 G A 5 33.471 7.710 44.287 1.00 43.92 N
ATOM 21 C2 G A 5 32.731 7.027 45.223 1.00 43.96 C
ATOM 22 N2 G A 5 33.284 6.899 46.442 1.00 46.01 N
ATOM 23 N3 G A 5 31.541 6.505 44.985 1.00 42.13 N
ATOM 24 C4 G A 5 31.145 6.711 43.715 1.00 40.53 C
ATOM 25 P U A 6 24.889 4.477 45.875 0.50 57.07 P
ATOM 26 OP1 U A 6 24.720 3.499 46.979 0.50 56.63 O
ATOM 27 OP2 U A 6 24.045 4.373 44.653 0.50 55.21 O
ATOM 28 O5' U A 6 24.712 5.939 46.486 0.50 58.78 O
TER
ATOM 1 O3' C B 10 42.587 14.723 45.034 1.00 42.62 O
ATOM 2 P A B 11 43.003 13.197 45.225 1.00 41.89 P
ATOM 3 OP1 A B 11 44.377 13.177 45.787 1.00 43.71 O
ATOM 4 OP2 A B 11 42.708 12.496 43.954 1.00 51.44 O
ATOM 5 O5' A B 11 42.006 12.655 46.332 1.00 45.49 O
ATOM 6 C5' A B 11 42.233 12.954 47.702 1.00 38.84 C
ATOM 7 C4' A B 11 41.200 12.268 48.541 1.00 36.97 C
ATOM 8 O4' A B 11 39.903 12.719 48.108 1.00 29.77 O
ATOM 9 C3' A B 11 41.129 10.766 48.362 1.00 37.74 C
ATOM 10 O3' A B 11 42.063 10.110 49.184 1.00 43.10 O
ATOM 11 C2' A B 11 39.700 10.452 48.770 1.00 36.32 C
ATOM 12 O2' A B 11 39.454 10.402 50.161 1.00 34.69 O
ATOM 13 C1' A B 11 38.982 11.650 48.180 1.00 29.63 C
ATOM 14 N9 A B 11 38.578 11.345 46.828 1.00 26.63 N
ATOM 15 C8 A B 11 39.140 11.785 45.655 1.00 27.86 C
ATOM 16 N7 A B 11 38.497 11.383 44.588 1.00 30.41 N
ATOM 17 C5 A B 11 37.457 10.613 45.096 1.00 28.79 C
ATOM 18 C6 A B 11 36.412 9.924 44.480 1.00 31.29 C
ATOM 19 N6 A B 11 36.236 9.901 43.161 1.00 34.80 N
ATOM 20 N1 A B 11 35.538 9.258 45.272 1.00 32.96 N
ATOM 21 C2 A B 11 35.725 9.297 46.608 1.00 29.37 C
ATOM 22 N3 A B 11 36.675 9.917 47.304 1.00 28.17 N
ATOM 23 C4 A B 11 37.512 10.566 46.476 1.00 26.63 C
ATOM 24 P C B 12 42.605 8.682 48.742 1.00 49.76 P
ATOM 25 OP1 C B 12 43.603 8.346 49.784 1.00 39.99 O
ATOM 26 OP2 C B 12 43.013 8.779 47.311 1.00 40.89 O
ATOM 27 O5' C B 12 41.330 7.729 48.861 1.00 38.81 O
TER
ATOM 2 P G A 5 27.494 4.325 39.702 1.00 53.80 P
ATOM 3 OP1 G A 5 26.264 3.809 39.044 1.00 49.96 O
ATOM 4 OP2 G A 5 28.094 5.600 39.240 1.00 52.29 O
ATOM 5 O5' G A 5 27.265 4.460 41.271 1.00 47.63 O
ATOM 6 C5' G A 5 27.267 3.310 42.090 1.00 49.07 C
ATOM 7 C4' G A 5 27.650 3.667 43.502 1.00 52.38 C
ATOM 8 O4' G A 5 28.986 4.213 43.525 1.00 51.36 O
ATOM 9 C3' G A 5 26.746 4.752 44.064 1.00 52.83 C
ATOM 10 O3' G A 5 26.414 4.435 45.399 1.00 53.09 O
ATOM 11 C2' G A 5 27.499 6.062 43.893 1.00 51.81 C
ATOM 12 O2' G A 5 27.351 6.880 45.027 1.00 59.14 O
ATOM 13 C1' G A 5 28.939 5.564 43.891 1.00 45.23 C
ATOM 14 N9 G A 5 29.964 6.291 43.171 1.00 40.81 N
ATOM 15 C8 G A 5 29.968 6.692 41.859 1.00 42.60 C
ATOM 16 N7 G A 5 31.054 7.340 41.528 1.00 40.06 N
ATOM 17 C5 G A 5 31.805 7.364 42.698 1.00 41.73 C
ATOM 18 C6 G A 5 33.080 7.936 42.967 1.00 44.06 C
ATOM 19 O6 G A 5 33.821 8.574 42.196 1.00 49.10 O
ATOM 20 N1 G A 5 33.471 7.710 44.287 1.00 43.92 N
ATOM 21 C2 G A 5 32.731 7.027 45.223 1.00 43.96 C
ATOM 22 N2 G A 5 33.284 6.899 46.442 1.00 46.01 N
ATOM 23 N3 G A 5 31.541 6.505 44.985 1.00 42.13 N
ATOM 24 C4 G A 5 31.145 6.711 43.715 1.00 40.53 C
ATOM 25 P U A 6 24.889 4.477 45.875 0.50 57.07 P
ATOM 26 OP1 U A 6 24.720 3.499 46.979 0.50 56.63 O
ATOM 27 OP2 U A 6 24.045 4.373 44.653 0.50 55.21 O
ATOM 28 O5' U A 6 24.712 5.939 46.486 0.50 58.78 O
TER
ATOM 1 O3' C B 10 42.587 14.723 45.034 1.00 42.62 O
ATOM 2 P A B 11 43.003 13.197 45.225 1.00 41.89 P
ATOM 3 OP1 A B 11 44.377 13.177 45.787 1.00 43.71 O
ATOM 4 OP2 A B 11 42.708 12.496 43.954 1.00 51.44 O
ATOM 5 O5' A B 11 42.006 12.655 46.332 1.00 45.49 O
ATOM 6 C5' A B 11 42.233 12.954 47.702 1.00 38.84 C
ATOM 7 C4' A B 11 41.200 12.268 48.541 1.00 36.97 C
ATOM 8 O4' A B 11 39.903 12.719 48.108 1.00 29.77 O
ATOM 9 C3' A B 11 41.129 10.766 48.362 1.00 37.74 C
ATOM 10 O3' A B 11 42.063 10.110 49.184 1.00 43.10 O
ATOM 11 C2' A B 11 39.700 10.452 48.770 1.00 36.32 C
ATOM 12 O2' A B 11 39.454 10.402 50.161 1.00 34.69 O
ATOM 13 C1' A B 11 38.982 11.650 48.180 1.00 29.63 C
ATOM 14 N9 A B 11 38.578 11.345 46.828 1.00 26.63 N
ATOM 15 C8 A B 11 39.140 11.785 45.655 1.00 27.86 C
ATOM 16 N7 A B 11 38.497 11.383 44.588 1.00 30.41 N
ATOM 17 C5 A B 11 37.457 10.613 45.096 1.00 28.79 C
ATOM 18 C6 A B 11 36.412 9.924 44.480 1.00 31.29 C
ATOM 19 N6 A B 11 36.236 9.901 43.161 1.00 34.80 N
ATOM 20 N1 A B 11 35.538 9.258 45.272 1.00 32.96 N
ATOM 21 C2 A B 11 35.725 9.297 46.608 1.00 29.37 C
ATOM 22 N3 A B 11 36.675 9.917 47.304 1.00 28.17 N
ATOM 23 C4 A B 11 37.512 10.566 46.476 1.00 26.63 C
ATOM 24 P C B 12 42.605 8.682 48.742 1.00 49.76 P
ATOM 25 OP1 C B 12 43.603 8.346 49.784 1.00 39.99 O
ATOM 26 OP2 C B 12 43.013 8.779 47.311 1.00 40.89 O
ATOM 27 O5' C B 12 41.330 7.729 48.861 1.00 38.81 O
TER
Atoms:
OP1: (26.264,3.809,39.044)
OP2: (28.094,5.600,39.240)
C3': (26.746,4.752,44.064)
C1': (28.939,5.564,43.891)
C5': (27.267,3.310,42.090)
O6: (33.821,8.574,42.196)
O4': (28.986,4.213,43.525)
C8: (29.968,6.692,41.859)
C2: (32.731,7.027,45.223)
C6: (33.080,7.936,42.967)
C5: (31.805,7.364,42.698)
C4: (31.145,6.711,43.715)
P: (27.494,4.325,39.702)
C4': (27.650,3.667,43.502)
C2': (27.499,6.062,43.893)
O2': (27.351,6.880,45.027)
N1: (33.471,7.710,44.287)
N2: (33.284,6.899,46.442)
N3: (31.541,6.505,44.985)
N7: (31.054,7.340,41.528)
N9: (29.964,6.291,43.171)
O5': (27.265,4.460,41.271)
O3': (26.414,4.435,45.399)
OP2: (28.094,5.600,39.240)
C3': (26.746,4.752,44.064)
C1': (28.939,5.564,43.891)
C5': (27.267,3.310,42.090)
O6: (33.821,8.574,42.196)
O4': (28.986,4.213,43.525)
C8: (29.968,6.692,41.859)
C2: (32.731,7.027,45.223)
C6: (33.080,7.936,42.967)
C5: (31.805,7.364,42.698)
C4: (31.145,6.711,43.715)
P: (27.494,4.325,39.702)
C4': (27.650,3.667,43.502)
C2': (27.499,6.062,43.893)
O2': (27.351,6.880,45.027)
N1: (33.471,7.710,44.287)
N2: (33.284,6.899,46.442)
N3: (31.541,6.505,44.985)
N7: (31.054,7.340,41.528)
N9: (29.964,6.291,43.171)
O5': (27.265,4.460,41.271)
O3': (26.414,4.435,45.399)
OP1: (44.377,13.177,45.787)
OP2: (42.708,12.496,43.954)
C3': (41.129,10.766,48.362)
C1': (38.982,11.650,48.180)
C5': (42.233,12.954,47.702)
O4': (39.903,12.719,48.108)
C8: (39.140,11.785,45.655)
O2': (39.454,10.402,50.161)
C6: (36.412,9.924,44.480)
C5: (37.457,10.613,45.096)
C4: (37.512,10.566,46.476)
P: (43.003,13.197,45.225)
C4': (41.200,12.268,48.541)
C2': (39.700,10.452,48.770)
C2: (35.725,9.297,46.608)
N1: (35.538,9.258,45.272)
N3: (36.675,9.917,47.304)
N6: (36.236,9.901,43.161)
N7: (38.497,11.383,44.588)
N9: (38.578,11.345,46.828)
O5': (42.006,12.655,46.332)
O3': (42.063,10.110,49.184)
OP2: (42.708,12.496,43.954)
C3': (41.129,10.766,48.362)
C1': (38.982,11.650,48.180)
C5': (42.233,12.954,47.702)
O4': (39.903,12.719,48.108)
C8: (39.140,11.785,45.655)
O2': (39.454,10.402,50.161)
C6: (36.412,9.924,44.480)
C5: (37.457,10.613,45.096)
C4: (37.512,10.566,46.476)
P: (43.003,13.197,45.225)
C4': (41.200,12.268,48.541)
C2': (39.700,10.452,48.770)
C2: (35.725,9.297,46.608)
N1: (35.538,9.258,45.272)
N3: (36.675,9.917,47.304)
N6: (36.236,9.901,43.161)
N7: (38.497,11.383,44.588)
N9: (38.578,11.345,46.828)
O5': (42.006,12.655,46.332)
O3': (42.063,10.110,49.184)
Image (generated by PyMOL):