ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VC6:B61:B42

Extra

PDB:
ATOM 1 O3' G A 60 34.743 72.978 67.070 1.00 67.40 O
ATOM 2 P G A 61 35.334 74.451 67.333 1.00 67.75 P
ATOM 3 OP1 G A 61 34.931 75.292 66.169 1.00 67.36 O
ATOM 4 OP2 G A 61 36.775 74.301 67.672 1.00 65.88 O
ATOM 5 O5' G A 61 34.518 74.976 68.599 1.00 67.28 O
ATOM 6 C5' G A 61 33.175 75.446 68.448 1.00 67.30 C
ATOM 7 C4' G A 61 32.556 75.673 69.799 1.00 67.07 C
ATOM 8 O4' G A 61 32.763 74.473 70.567 1.00 67.81 O
ATOM 9 C3' G A 61 33.173 76.783 70.629 1.00 67.71 C
ATOM 10 O3' G A 61 32.571 78.039 70.347 1.00 67.88 O
ATOM 11 C2' G A 61 33.012 76.313 72.064 1.00 69.95 C
ATOM 12 O2' G A 61 31.804 76.667 72.713 1.00 74.90 O
ATOM 13 C1' G A 61 33.070 74.797 71.899 1.00 67.46 C
ATOM 14 N9 G A 61 34.370 74.226 72.191 1.00 65.24 N
ATOM 15 C8 G A 61 35.464 74.178 71.372 1.00 64.06 C
ATOM 16 N7 G A 61 36.464 73.535 71.902 1.00 63.42 N
ATOM 17 C5 G A 61 35.999 73.154 73.149 1.00 62.94 C
ATOM 18 C6 G A 61 36.631 72.434 74.173 1.00 63.70 C
ATOM 19 O6 G A 61 37.773 71.961 74.190 1.00 65.67 O
ATOM 20 N1 G A 61 35.797 72.281 75.271 1.00 63.48 N
ATOM 21 C2 G A 61 34.517 72.765 75.362 1.00 62.83 C
ATOM 22 N2 G A 61 33.865 72.523 76.497 1.00 63.67 N
ATOM 23 N3 G A 61 33.921 73.436 74.411 1.00 62.07 N
ATOM 24 C4 G A 61 34.715 73.591 73.342 1.00 63.18 C
ATOM 25 P U A 62 30.968 78.255 70.498 1.00 68.10 P
ATOM 26 OP1 U A 62 30.407 77.974 71.839 1.00 67.39 O
ATOM 27 OP2 U A 62 30.302 77.690 69.299 1.00 68.41 O
ATOM 28 O5' U A 62 30.864 79.831 70.360 1.00 69.92 O
TER

ATOM 1 O3' A B 41 40.912 66.693 83.795 1.00 75.81 O
ATOM 2 P A B 42 39.639 65.861 83.266 1.00 76.54 P
ATOM 3 OP1 A B 42 39.324 64.774 84.224 1.00 76.29 O
ATOM 4 OP2 A B 42 39.854 65.540 81.831 1.00 76.18 O
ATOM 5 O5' A B 42 38.450 66.909 83.338 1.00 76.65 O
ATOM 6 C5' A B 42 38.133 67.568 84.554 1.00 74.11 C
ATOM 7 C4' A B 42 37.095 68.618 84.292 1.00 73.20 C
ATOM 8 O4' A B 42 37.687 69.723 83.572 1.00 73.91 O
ATOM 9 C3' A B 42 35.969 68.136 83.401 1.00 72.73 C
ATOM 10 O3' A B 42 34.973 67.470 84.150 1.00 72.11 O
ATOM 11 C2' A B 42 35.474 69.417 82.748 1.00 72.81 C
ATOM 12 O2' A B 42 34.555 70.125 83.550 1.00 71.64 O
ATOM 13 C1' A B 42 36.773 70.210 82.608 1.00 74.20 C
ATOM 14 N9 A B 42 37.382 70.040 81.293 1.00 76.46 N
ATOM 15 C8 A B 42 38.428 69.220 80.936 1.00 76.25 C
ATOM 16 N7 A B 42 38.739 69.286 79.666 1.00 77.11 N
ATOM 17 C5 A B 42 37.841 70.213 79.152 1.00 77.88 C
ATOM 18 C6 A B 42 37.649 70.724 77.864 1.00 78.39 C
ATOM 19 N6 A B 42 38.380 70.367 76.810 1.00 79.10 N
ATOM 20 N1 A B 42 36.664 71.629 77.690 1.00 78.76 N
ATOM 21 C2 A B 42 35.933 71.990 78.746 1.00 78.04 C
ATOM 22 N3 A B 42 36.016 71.582 80.004 1.00 77.60 N
ATOM 23 C4 A B 42 37.002 70.681 80.143 1.00 77.28 C
ATOM 24 P C B 43 34.212 66.224 83.502 1.00 71.31 P
ATOM 25 OP1 C B 43 33.333 65.649 84.552 1.00 72.16 O
ATOM 26 OP2 C B 43 35.245 65.375 82.837 1.00 71.99 O
ATOM 27 O5' C B 43 33.272 66.878 82.401 1.00 68.38 O
TER

Atoms:
OP1: (34.931,75.292,66.169)
OP2: (36.775,74.301,67.672)
C3': (33.173,76.783,70.629)
C1': (33.070,74.797,71.899)
C5': (33.175,75.446,68.448)
O6: (37.773,71.961,74.190)
O4': (32.763,74.473,70.567)
C8: (35.464,74.178,71.372)
C2: (34.517,72.765,75.362)
C6: (36.631,72.434,74.173)
C5: (35.999,73.154,73.149)
C4: (34.715,73.591,73.342)
P: (35.334,74.451,67.333)
C4': (32.556,75.673,69.799)
C2': (33.012,76.313,72.064)
O2': (31.804,76.667,72.713)
N1: (35.797,72.281,75.271)
N2: (33.865,72.523,76.497)
N3: (33.921,73.436,74.411)
N7: (36.464,73.535,71.902)
N9: (34.370,74.226,72.191)
O5': (34.518,74.976,68.599)
O3': (32.571,78.039,70.347)
OP1: (39.324,64.774,84.224)
OP2: (39.854,65.540,81.831)
C3': (35.969,68.136,83.401)
C1': (36.773,70.210,82.608)
C5': (38.133,67.568,84.554)
O4': (37.687,69.723,83.572)
C8: (38.428,69.220,80.936)
O2': (34.555,70.125,83.550)
C6: (37.649,70.724,77.864)
C5: (37.841,70.213,79.152)
C4: (37.002,70.681,80.143)
P: (39.639,65.861,83.266)
C4': (37.095,68.618,84.292)
C2': (35.474,69.417,82.748)
C2: (35.933,71.990,78.746)
N1: (36.664,71.629,77.690)
N3: (36.016,71.582,80.004)
N6: (38.380,70.367,76.810)
N7: (38.739,69.286,79.666)
N9: (37.382,70.040,81.293)
O5': (38.450,66.909,83.338)
O3': (34.973,67.470,84.150)
Image (generated by PyMOL):
PyMOL image
show in jmol