Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DUL:B20:B31
Extra
PDB:
ATOM 1 O3' G A 19 20.635 15.459 7.568 1.00 29.36 O
ATOM 2 P G A 20 19.902 14.224 6.845 1.00 30.41 P
ATOM 3 OP1 G A 20 18.647 14.745 6.239 1.00 30.21 O
ATOM 4 OP2 G A 20 19.848 13.073 7.772 1.00 28.39 O
ATOM 5 O5' G A 20 20.894 13.840 5.661 1.00 28.83 O
ATOM 6 C5' G A 20 21.037 14.700 4.538 1.00 27.27 C
ATOM 7 C4' G A 20 22.299 14.372 3.779 1.00 25.17 C
ATOM 8 O4' G A 20 23.456 14.530 4.647 1.00 25.99 O
ATOM 9 C3' G A 20 22.429 12.946 3.282 1.00 26.50 C
ATOM 10 O3' G A 20 21.717 12.767 2.067 1.00 28.08 O
ATOM 11 C2' G A 20 23.931 12.865 3.052 1.00 25.59 C
ATOM 12 O2' G A 20 24.304 13.617 1.917 1.00 23.04 O
ATOM 13 C1' G A 20 24.444 13.558 4.314 1.00 24.35 C
ATOM 14 N9 G A 20 24.515 12.598 5.409 1.00 23.35 N
ATOM 15 C8 G A 20 23.620 12.467 6.442 1.00 24.31 C
ATOM 16 N7 G A 20 23.890 11.460 7.226 1.00 22.62 N
ATOM 17 C5 G A 20 25.050 10.910 6.694 1.00 23.04 C
ATOM 18 C6 G A 20 25.822 9.788 7.119 1.00 22.94 C
ATOM 19 O6 G A 20 25.628 9.038 8.084 1.00 24.39 O
ATOM 20 N1 G A 20 26.921 9.580 6.291 1.00 22.33 N
ATOM 21 C2 G A 20 27.246 10.355 5.207 1.00 21.39 C
ATOM 22 N2 G A 20 28.353 10.003 4.541 1.00 19.56 N
ATOM 23 N3 G A 20 26.542 11.396 4.808 1.00 22.60 N
ATOM 24 C4 G A 20 25.461 11.612 5.588 1.00 22.44 C
ATOM 25 P U A 21 21.114 11.322 1.707 1.00 29.91 P
ATOM 26 OP1 U A 21 20.443 11.443 0.379 1.00 29.10 O
ATOM 27 OP2 U A 21 20.343 10.858 2.884 1.00 28.83 O
ATOM 28 O5' U A 21 22.390 10.383 1.558 1.00 27.30 O
TER
ATOM 1 O3' A B 30 30.365 -1.245 9.768 1.00 28.53 O
ATOM 2 P A B 31 31.306 -0.217 10.570 1.00 30.82 P
ATOM 3 OP1 A B 31 32.460 -0.997 11.075 1.00 30.22 O
ATOM 4 OP2 A B 31 30.467 0.555 11.518 1.00 29.99 O
ATOM 5 O5' A B 31 31.824 0.788 9.443 1.00 28.40 O
ATOM 6 C5' A B 31 32.662 0.331 8.391 1.00 26.56 C
ATOM 7 C4' A B 31 32.655 1.323 7.248 1.00 24.53 C
ATOM 8 O4' A B 31 31.289 1.523 6.781 1.00 25.90 O
ATOM 9 C3' A B 31 33.097 2.730 7.604 1.00 24.34 C
ATOM 10 O3' A B 31 34.512 2.824 7.656 1.00 25.29 O
ATOM 11 C2' A B 31 32.512 3.527 6.453 1.00 23.48 C
ATOM 12 O2' A B 31 33.240 3.334 5.259 1.00 23.20 O
ATOM 13 C1' A B 31 31.136 2.871 6.322 1.00 24.24 C
ATOM 14 N9 A B 31 30.179 3.561 7.187 1.00 24.02 N
ATOM 15 C8 A B 31 29.729 3.209 8.434 1.00 23.47 C
ATOM 16 N7 A B 31 28.877 4.064 8.947 1.00 20.93 N
ATOM 17 C5 A B 31 28.755 5.042 7.970 1.00 21.98 C
ATOM 18 C6 A B 31 27.992 6.225 7.896 1.00 22.84 C
ATOM 19 N6 A B 31 27.146 6.635 8.851 1.00 21.81 N
ATOM 20 N1 A B 31 28.120 6.986 6.785 1.00 21.19 N
ATOM 21 C2 A B 31 28.942 6.573 5.817 1.00 22.80 C
ATOM 22 N3 A B 31 29.696 5.477 5.763 1.00 23.34 N
ATOM 23 C4 A B 31 29.554 4.748 6.885 1.00 23.64 C
ATOM 24 P G B 32 35.201 3.725 8.794 1.00 26.11 P
ATOM 25 OP1 G B 32 36.664 3.621 8.596 1.00 28.04 O
ATOM 26 OP2 G B 32 34.609 3.417 10.111 1.00 24.82 O
ATOM 27 O5' G B 32 34.719 5.208 8.443 1.00 26.44 O
TER
ATOM 2 P G A 20 19.902 14.224 6.845 1.00 30.41 P
ATOM 3 OP1 G A 20 18.647 14.745 6.239 1.00 30.21 O
ATOM 4 OP2 G A 20 19.848 13.073 7.772 1.00 28.39 O
ATOM 5 O5' G A 20 20.894 13.840 5.661 1.00 28.83 O
ATOM 6 C5' G A 20 21.037 14.700 4.538 1.00 27.27 C
ATOM 7 C4' G A 20 22.299 14.372 3.779 1.00 25.17 C
ATOM 8 O4' G A 20 23.456 14.530 4.647 1.00 25.99 O
ATOM 9 C3' G A 20 22.429 12.946 3.282 1.00 26.50 C
ATOM 10 O3' G A 20 21.717 12.767 2.067 1.00 28.08 O
ATOM 11 C2' G A 20 23.931 12.865 3.052 1.00 25.59 C
ATOM 12 O2' G A 20 24.304 13.617 1.917 1.00 23.04 O
ATOM 13 C1' G A 20 24.444 13.558 4.314 1.00 24.35 C
ATOM 14 N9 G A 20 24.515 12.598 5.409 1.00 23.35 N
ATOM 15 C8 G A 20 23.620 12.467 6.442 1.00 24.31 C
ATOM 16 N7 G A 20 23.890 11.460 7.226 1.00 22.62 N
ATOM 17 C5 G A 20 25.050 10.910 6.694 1.00 23.04 C
ATOM 18 C6 G A 20 25.822 9.788 7.119 1.00 22.94 C
ATOM 19 O6 G A 20 25.628 9.038 8.084 1.00 24.39 O
ATOM 20 N1 G A 20 26.921 9.580 6.291 1.00 22.33 N
ATOM 21 C2 G A 20 27.246 10.355 5.207 1.00 21.39 C
ATOM 22 N2 G A 20 28.353 10.003 4.541 1.00 19.56 N
ATOM 23 N3 G A 20 26.542 11.396 4.808 1.00 22.60 N
ATOM 24 C4 G A 20 25.461 11.612 5.588 1.00 22.44 C
ATOM 25 P U A 21 21.114 11.322 1.707 1.00 29.91 P
ATOM 26 OP1 U A 21 20.443 11.443 0.379 1.00 29.10 O
ATOM 27 OP2 U A 21 20.343 10.858 2.884 1.00 28.83 O
ATOM 28 O5' U A 21 22.390 10.383 1.558 1.00 27.30 O
TER
ATOM 1 O3' A B 30 30.365 -1.245 9.768 1.00 28.53 O
ATOM 2 P A B 31 31.306 -0.217 10.570 1.00 30.82 P
ATOM 3 OP1 A B 31 32.460 -0.997 11.075 1.00 30.22 O
ATOM 4 OP2 A B 31 30.467 0.555 11.518 1.00 29.99 O
ATOM 5 O5' A B 31 31.824 0.788 9.443 1.00 28.40 O
ATOM 6 C5' A B 31 32.662 0.331 8.391 1.00 26.56 C
ATOM 7 C4' A B 31 32.655 1.323 7.248 1.00 24.53 C
ATOM 8 O4' A B 31 31.289 1.523 6.781 1.00 25.90 O
ATOM 9 C3' A B 31 33.097 2.730 7.604 1.00 24.34 C
ATOM 10 O3' A B 31 34.512 2.824 7.656 1.00 25.29 O
ATOM 11 C2' A B 31 32.512 3.527 6.453 1.00 23.48 C
ATOM 12 O2' A B 31 33.240 3.334 5.259 1.00 23.20 O
ATOM 13 C1' A B 31 31.136 2.871 6.322 1.00 24.24 C
ATOM 14 N9 A B 31 30.179 3.561 7.187 1.00 24.02 N
ATOM 15 C8 A B 31 29.729 3.209 8.434 1.00 23.47 C
ATOM 16 N7 A B 31 28.877 4.064 8.947 1.00 20.93 N
ATOM 17 C5 A B 31 28.755 5.042 7.970 1.00 21.98 C
ATOM 18 C6 A B 31 27.992 6.225 7.896 1.00 22.84 C
ATOM 19 N6 A B 31 27.146 6.635 8.851 1.00 21.81 N
ATOM 20 N1 A B 31 28.120 6.986 6.785 1.00 21.19 N
ATOM 21 C2 A B 31 28.942 6.573 5.817 1.00 22.80 C
ATOM 22 N3 A B 31 29.696 5.477 5.763 1.00 23.34 N
ATOM 23 C4 A B 31 29.554 4.748 6.885 1.00 23.64 C
ATOM 24 P G B 32 35.201 3.725 8.794 1.00 26.11 P
ATOM 25 OP1 G B 32 36.664 3.621 8.596 1.00 28.04 O
ATOM 26 OP2 G B 32 34.609 3.417 10.111 1.00 24.82 O
ATOM 27 O5' G B 32 34.719 5.208 8.443 1.00 26.44 O
TER
Atoms:
OP1: (18.647,14.745,6.239)
OP2: (19.848,13.073,7.772)
C3': (22.429,12.946,3.282)
C1': (24.444,13.558,4.314)
C5': (21.037,14.700,4.538)
O6: (25.628,9.038,8.084)
O4': (23.456,14.530,4.647)
C8: (23.620,12.467,6.442)
C2: (27.246,10.355,5.207)
C6: (25.822,9.788,7.119)
C5: (25.050,10.910,6.694)
C4: (25.461,11.612,5.588)
P: (19.902,14.224,6.845)
C4': (22.299,14.372,3.779)
C2': (23.931,12.865,3.052)
O2': (24.304,13.617,1.917)
N1: (26.921,9.580,6.291)
N2: (28.353,10.003,4.541)
N3: (26.542,11.396,4.808)
N7: (23.890,11.460,7.226)
N9: (24.515,12.598,5.409)
O5': (20.894,13.840,5.661)
O3': (21.717,12.767,2.067)
OP2: (19.848,13.073,7.772)
C3': (22.429,12.946,3.282)
C1': (24.444,13.558,4.314)
C5': (21.037,14.700,4.538)
O6: (25.628,9.038,8.084)
O4': (23.456,14.530,4.647)
C8: (23.620,12.467,6.442)
C2: (27.246,10.355,5.207)
C6: (25.822,9.788,7.119)
C5: (25.050,10.910,6.694)
C4: (25.461,11.612,5.588)
P: (19.902,14.224,6.845)
C4': (22.299,14.372,3.779)
C2': (23.931,12.865,3.052)
O2': (24.304,13.617,1.917)
N1: (26.921,9.580,6.291)
N2: (28.353,10.003,4.541)
N3: (26.542,11.396,4.808)
N7: (23.890,11.460,7.226)
N9: (24.515,12.598,5.409)
O5': (20.894,13.840,5.661)
O3': (21.717,12.767,2.067)
OP1: (32.460,-0.997,11.075)
OP2: (30.467,0.555,11.518)
C3': (33.097,2.730,7.604)
C1': (31.136,2.871,6.322)
C5': (32.662,0.331,8.391)
O4': (31.289,1.523,6.781)
C8: (29.729,3.209,8.434)
O2': (33.240,3.334,5.259)
C6: (27.992,6.225,7.896)
C5: (28.755,5.042,7.970)
C4: (29.554,4.748,6.885)
P: (31.306,-0.217,10.570)
C4': (32.655,1.323,7.248)
C2': (32.512,3.527,6.453)
C2: (28.942,6.573,5.817)
N1: (28.120,6.986,6.785)
N3: (29.696,5.477,5.763)
N6: (27.146,6.635,8.851)
N7: (28.877,4.064,8.947)
N9: (30.179,3.561,7.187)
O5': (31.824,0.788,9.443)
O3': (34.512,2.824,7.656)
OP2: (30.467,0.555,11.518)
C3': (33.097,2.730,7.604)
C1': (31.136,2.871,6.322)
C5': (32.662,0.331,8.391)
O4': (31.289,1.523,6.781)
C8: (29.729,3.209,8.434)
O2': (33.240,3.334,5.259)
C6: (27.992,6.225,7.896)
C5: (28.755,5.042,7.970)
C4: (29.554,4.748,6.885)
P: (31.306,-0.217,10.570)
C4': (32.655,1.323,7.248)
C2': (32.512,3.527,6.453)
C2: (28.942,6.573,5.817)
N1: (28.120,6.986,6.785)
N3: (29.696,5.477,5.763)
N6: (27.146,6.635,8.851)
N7: (28.877,4.064,8.947)
N9: (30.179,3.561,7.187)
O5': (31.824,0.788,9.443)
O3': (34.512,2.824,7.656)
Image (generated by PyMOL):