ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A652:A694

Extra

PDB:
ATOM 1 O3' G A 651 -7.017 148.574 78.732 1.00 3.67 O
ATOM 2 P G A 652 -8.134 149.365 79.556 1.00 44.12 P
ATOM 3 OP1 G A 652 -8.053 150.779 79.115 1.00 69.07 O
ATOM 4 OP2 G A 652 -7.978 149.044 80.990 1.00 66.27 O
ATOM 5 O5' G A 652 -9.498 148.732 79.029 1.00 1.55 O
ATOM 6 C5' G A 652 -9.929 148.974 77.682 1.00 1.55 C
ATOM 7 C4' G A 652 -11.060 148.056 77.307 1.00 1.55 C
ATOM 8 O4' G A 652 -10.595 146.692 77.390 1.00 1.55 O
ATOM 9 C3' G A 652 -12.296 148.098 78.187 1.00 1.55 C
ATOM 10 O3' G A 652 -13.197 149.106 77.775 1.00 1.82 O
ATOM 11 C2' G A 652 -12.902 146.716 77.973 1.00 1.55 C
ATOM 12 O2' G A 652 -13.665 146.627 76.787 1.00 2.30 O
ATOM 13 C1' G A 652 -11.657 145.847 77.813 1.00 1.55 C
ATOM 14 N9 G A 652 -11.257 145.141 79.035 1.00 24.31 N
ATOM 15 C8 G A 652 -10.323 145.533 79.961 1.00 23.14 C
ATOM 16 N7 G A 652 -10.164 144.674 80.927 1.00 22.85 N
ATOM 17 C5 G A 652 -11.055 143.657 80.629 1.00 23.33 C
ATOM 18 C6 G A 652 -11.324 142.444 81.309 1.00 23.96 C
ATOM 19 O6 G A 652 -10.809 142.005 82.344 1.00 23.08 O
ATOM 20 N1 G A 652 -12.295 141.703 80.660 1.00 23.37 N
ATOM 21 C2 G A 652 -12.924 142.074 79.509 1.00 22.93 C
ATOM 22 N2 G A 652 -13.840 141.224 79.037 1.00 24.30 N
ATOM 23 N3 G A 652 -12.680 143.195 78.863 1.00 22.42 N
ATOM 24 C4 G A 652 -11.741 143.933 79.473 1.00 23.04 C
ATOM 25 P A A 653 -14.423 149.506 78.729 1.00 37.13 P
ATOM 26 OP1 A A 653 -15.088 150.705 78.172 1.00 38.18 O
ATOM 27 OP2 A A 653 -13.894 149.534 80.111 1.00 36.34 O
ATOM 28 O5' A A 653 -15.456 148.308 78.586 1.00 5.04 O
TER

ATOM 1 O3' A B 693 -13.162 133.348 88.708 1.00 10.18 O
ATOM 2 P A B 694 -12.247 132.788 87.519 1.00 9.74 P
ATOM 3 OP1 A B 694 -12.205 131.321 87.668 1.00 14.68 O
ATOM 4 OP2 A B 694 -10.981 133.552 87.469 1.00 13.79 O
ATOM 5 O5' A B 694 -13.134 133.108 86.239 1.00 28.72 O
ATOM 6 C5' A B 694 -14.429 132.495 86.096 1.00 29.50 C
ATOM 7 C4' A B 694 -15.134 132.994 84.852 1.00 29.90 C
ATOM 8 O4' A B 694 -15.600 134.359 85.036 1.00 31.44 O
ATOM 9 C3' A B 694 -14.340 133.028 83.555 1.00 30.76 C
ATOM 10 O3' A B 694 -14.264 131.766 82.915 1.00 30.13 O
ATOM 11 C2' A B 694 -15.136 134.039 82.743 1.00 30.94 C
ATOM 12 O2' A B 694 -16.327 133.458 82.231 1.00 31.37 O
ATOM 13 C1' A B 694 -15.483 135.070 83.816 1.00 30.03 C
ATOM 14 N9 A B 694 -14.386 136.028 83.975 1.00 24.15 N
ATOM 15 C8 A B 694 -13.311 135.911 84.824 1.00 24.63 C
ATOM 16 N7 A B 694 -12.464 136.905 84.747 1.00 25.80 N
ATOM 17 C5 A B 694 -13.018 137.739 83.787 1.00 24.66 C
ATOM 18 C6 A B 694 -12.596 138.964 83.248 1.00 24.75 C
ATOM 19 N6 A B 694 -11.489 139.601 83.628 1.00 25.92 N
ATOM 20 N1 A B 694 -13.363 139.523 82.297 1.00 23.47 N
ATOM 21 C2 A B 694 -14.486 138.895 81.928 1.00 23.79 C
ATOM 22 N3 A B 694 -14.995 137.750 82.366 1.00 24.06 N
ATOM 23 C4 A B 694 -14.203 137.212 83.304 1.00 23.80 C
ATOM 24 P C B 695 -13.357 131.606 81.601 1.00 10.43 P
ATOM 25 OP1 C B 695 -13.670 130.272 81.034 1.00 8.29 O
ATOM 26 OP2 C B 695 -11.932 131.980 81.887 1.00 6.12 O
ATOM 27 O5' C B 695 -14.020 132.657 80.611 1.00 26.88 O
TER

Atoms:
OP1: (-8.053,150.779,79.115)
OP2: (-7.978,149.044,80.990)
C3': (-12.296,148.098,78.187)
C1': (-11.657,145.847,77.813)
C5': (-9.929,148.974,77.682)
O6: (-10.809,142.005,82.344)
O4': (-10.595,146.692,77.390)
C8: (-10.323,145.533,79.961)
C2: (-12.924,142.074,79.509)
C6: (-11.324,142.444,81.309)
C5: (-11.055,143.657,80.629)
C4: (-11.741,143.933,79.473)
P: (-8.134,149.365,79.556)
C4': (-11.060,148.056,77.307)
C2': (-12.902,146.716,77.973)
O2': (-13.665,146.627,76.787)
N1: (-12.295,141.703,80.660)
N2: (-13.840,141.224,79.037)
N3: (-12.680,143.195,78.863)
N7: (-10.164,144.674,80.927)
N9: (-11.257,145.141,79.035)
O5': (-9.498,148.732,79.029)
O3': (-13.197,149.106,77.775)
OP1: (-12.205,131.321,87.668)
OP2: (-10.981,133.552,87.469)
C3': (-14.340,133.028,83.555)
C1': (-15.483,135.070,83.816)
C5': (-14.429,132.495,86.096)
O4': (-15.600,134.359,85.036)
C8: (-13.311,135.911,84.824)
O2': (-16.327,133.458,82.231)
C6: (-12.596,138.964,83.248)
C5: (-13.018,137.739,83.787)
C4: (-14.203,137.212,83.304)
P: (-12.247,132.788,87.519)
C4': (-15.134,132.994,84.852)
C2': (-15.136,134.039,82.743)
C2: (-14.486,138.895,81.928)
N1: (-13.363,139.523,82.297)
N3: (-14.995,137.750,82.366)
N6: (-11.489,139.601,83.628)
N7: (-12.464,136.905,84.747)
N9: (-14.386,136.028,83.975)
O5': (-13.134,133.108,86.239)
O3': (-14.264,131.766,82.915)
Image (generated by PyMOL):
PyMOL image
show in jmol