Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3I2U:C5:B24
Extra
PDB:
ATOM 1 O3' G A 4 28.923 3.780 41.762 1.00 61.82 O
ATOM 2 P G A 5 27.786 4.906 41.912 1.00 64.84 P
ATOM 3 OP1 G A 5 26.595 4.409 41.185 1.00 65.57 O
ATOM 4 OP2 G A 5 28.365 6.218 41.540 1.00 67.20 O
ATOM 5 O5' G A 5 27.459 4.945 43.475 1.00 63.79 O
ATOM 6 C5' G A 5 27.403 3.753 44.272 1.00 64.34 C
ATOM 7 C4' G A 5 27.980 4.050 45.629 1.00 62.08 C
ATOM 8 O4' G A 5 29.265 4.621 45.404 1.00 66.13 O
ATOM 9 C3' G A 5 27.164 5.028 46.470 1.00 63.30 C
ATOM 10 O3' G A 5 26.967 4.301 47.686 1.00 64.21 O
ATOM 11 C2' G A 5 28.109 6.192 46.797 1.00 64.74 C
ATOM 12 O2' G A 5 28.228 6.479 48.171 1.00 78.46 O
ATOM 13 C1' G A 5 29.454 5.683 46.283 1.00 62.32 C
ATOM 14 N9 G A 5 30.396 6.605 45.679 1.00 57.41 N
ATOM 15 C8 G A 5 30.327 7.207 44.448 1.00 55.91 C
ATOM 16 N7 G A 5 31.381 7.930 44.182 1.00 55.46 N
ATOM 17 C5 G A 5 32.174 7.809 45.318 1.00 53.37 C
ATOM 18 C6 G A 5 33.431 8.375 45.627 1.00 52.90 C
ATOM 19 O6 G A 5 34.122 9.140 44.940 1.00 53.97 O
ATOM 20 N1 G A 5 33.878 7.973 46.883 1.00 52.20 N
ATOM 21 C2 G A 5 33.200 7.138 47.734 1.00 52.70 C
ATOM 22 N2 G A 5 33.806 6.843 48.899 1.00 51.54 N
ATOM 23 N3 G A 5 32.019 6.622 47.463 1.00 52.17 N
ATOM 24 C4 G A 5 31.572 6.997 46.248 1.00 54.44 C
ATOM 25 P U A 6 25.580 4.357 48.481 1.00 65.79 P
ATOM 26 OP1 U A 6 25.704 3.392 49.604 1.00 60.59 O
ATOM 27 OP2 U A 6 24.533 4.170 47.443 1.00 68.20 O
ATOM 28 O5' U A 6 25.498 5.817 49.115 1.00 65.74 O
TER
ATOM 1 O3' C B 23 42.922 15.108 47.432 1.00 54.15 O
ATOM 2 P A B 24 43.416 13.582 47.543 1.00 54.11 P
ATOM 3 OP1 A B 24 44.804 13.617 48.079 1.00 52.52 O
ATOM 4 OP2 A B 24 43.138 12.875 46.263 1.00 57.70 O
ATOM 5 O5' A B 24 42.475 12.949 48.658 1.00 51.62 O
ATOM 6 C5' A B 24 42.665 13.267 50.020 1.00 48.36 C
ATOM 7 C4' A B 24 41.630 12.569 50.852 1.00 53.89 C
ATOM 8 O4' A B 24 40.318 12.983 50.392 1.00 53.05 O
ATOM 9 C3' A B 24 41.594 11.063 50.693 1.00 56.98 C
ATOM 10 O3' A B 24 42.571 10.405 51.483 1.00 61.44 O
ATOM 11 C2' A B 24 40.170 10.733 51.116 1.00 56.11 C
ATOM 12 O2' A B 24 39.991 10.773 52.516 1.00 56.34 O
ATOM 13 C1' A B 24 39.412 11.899 50.495 1.00 52.48 C
ATOM 14 N9 A B 24 38.927 11.585 49.158 1.00 52.96 N
ATOM 15 C8 A B 24 39.445 11.996 47.958 1.00 51.98 C
ATOM 16 N7 A B 24 38.760 11.581 46.922 1.00 52.85 N
ATOM 17 C5 A B 24 37.728 10.838 47.480 1.00 52.39 C
ATOM 18 C6 A B 24 36.646 10.148 46.910 1.00 53.42 C
ATOM 19 N6 A B 24 36.426 10.080 45.595 1.00 51.71 N
ATOM 20 N1 A B 24 35.788 9.525 47.748 1.00 54.34 N
ATOM 21 C2 A B 24 36.018 9.596 49.066 1.00 54.09 C
ATOM 22 N3 A B 24 37.002 10.211 49.716 1.00 52.67 N
ATOM 23 C4 A B 24 37.828 10.823 48.854 1.00 51.47 C
ATOM 24 P C B 25 43.125 8.969 51.013 1.00 63.44 P
ATOM 25 OP1 C B 25 44.064 8.511 52.072 1.00 62.00 O
ATOM 26 OP2 C B 25 43.597 9.092 49.602 1.00 59.92 O
ATOM 27 O5' C B 25 41.829 8.034 51.025 1.00 58.56 O
TER
ATOM 2 P G A 5 27.786 4.906 41.912 1.00 64.84 P
ATOM 3 OP1 G A 5 26.595 4.409 41.185 1.00 65.57 O
ATOM 4 OP2 G A 5 28.365 6.218 41.540 1.00 67.20 O
ATOM 5 O5' G A 5 27.459 4.945 43.475 1.00 63.79 O
ATOM 6 C5' G A 5 27.403 3.753 44.272 1.00 64.34 C
ATOM 7 C4' G A 5 27.980 4.050 45.629 1.00 62.08 C
ATOM 8 O4' G A 5 29.265 4.621 45.404 1.00 66.13 O
ATOM 9 C3' G A 5 27.164 5.028 46.470 1.00 63.30 C
ATOM 10 O3' G A 5 26.967 4.301 47.686 1.00 64.21 O
ATOM 11 C2' G A 5 28.109 6.192 46.797 1.00 64.74 C
ATOM 12 O2' G A 5 28.228 6.479 48.171 1.00 78.46 O
ATOM 13 C1' G A 5 29.454 5.683 46.283 1.00 62.32 C
ATOM 14 N9 G A 5 30.396 6.605 45.679 1.00 57.41 N
ATOM 15 C8 G A 5 30.327 7.207 44.448 1.00 55.91 C
ATOM 16 N7 G A 5 31.381 7.930 44.182 1.00 55.46 N
ATOM 17 C5 G A 5 32.174 7.809 45.318 1.00 53.37 C
ATOM 18 C6 G A 5 33.431 8.375 45.627 1.00 52.90 C
ATOM 19 O6 G A 5 34.122 9.140 44.940 1.00 53.97 O
ATOM 20 N1 G A 5 33.878 7.973 46.883 1.00 52.20 N
ATOM 21 C2 G A 5 33.200 7.138 47.734 1.00 52.70 C
ATOM 22 N2 G A 5 33.806 6.843 48.899 1.00 51.54 N
ATOM 23 N3 G A 5 32.019 6.622 47.463 1.00 52.17 N
ATOM 24 C4 G A 5 31.572 6.997 46.248 1.00 54.44 C
ATOM 25 P U A 6 25.580 4.357 48.481 1.00 65.79 P
ATOM 26 OP1 U A 6 25.704 3.392 49.604 1.00 60.59 O
ATOM 27 OP2 U A 6 24.533 4.170 47.443 1.00 68.20 O
ATOM 28 O5' U A 6 25.498 5.817 49.115 1.00 65.74 O
TER
ATOM 1 O3' C B 23 42.922 15.108 47.432 1.00 54.15 O
ATOM 2 P A B 24 43.416 13.582 47.543 1.00 54.11 P
ATOM 3 OP1 A B 24 44.804 13.617 48.079 1.00 52.52 O
ATOM 4 OP2 A B 24 43.138 12.875 46.263 1.00 57.70 O
ATOM 5 O5' A B 24 42.475 12.949 48.658 1.00 51.62 O
ATOM 6 C5' A B 24 42.665 13.267 50.020 1.00 48.36 C
ATOM 7 C4' A B 24 41.630 12.569 50.852 1.00 53.89 C
ATOM 8 O4' A B 24 40.318 12.983 50.392 1.00 53.05 O
ATOM 9 C3' A B 24 41.594 11.063 50.693 1.00 56.98 C
ATOM 10 O3' A B 24 42.571 10.405 51.483 1.00 61.44 O
ATOM 11 C2' A B 24 40.170 10.733 51.116 1.00 56.11 C
ATOM 12 O2' A B 24 39.991 10.773 52.516 1.00 56.34 O
ATOM 13 C1' A B 24 39.412 11.899 50.495 1.00 52.48 C
ATOM 14 N9 A B 24 38.927 11.585 49.158 1.00 52.96 N
ATOM 15 C8 A B 24 39.445 11.996 47.958 1.00 51.98 C
ATOM 16 N7 A B 24 38.760 11.581 46.922 1.00 52.85 N
ATOM 17 C5 A B 24 37.728 10.838 47.480 1.00 52.39 C
ATOM 18 C6 A B 24 36.646 10.148 46.910 1.00 53.42 C
ATOM 19 N6 A B 24 36.426 10.080 45.595 1.00 51.71 N
ATOM 20 N1 A B 24 35.788 9.525 47.748 1.00 54.34 N
ATOM 21 C2 A B 24 36.018 9.596 49.066 1.00 54.09 C
ATOM 22 N3 A B 24 37.002 10.211 49.716 1.00 52.67 N
ATOM 23 C4 A B 24 37.828 10.823 48.854 1.00 51.47 C
ATOM 24 P C B 25 43.125 8.969 51.013 1.00 63.44 P
ATOM 25 OP1 C B 25 44.064 8.511 52.072 1.00 62.00 O
ATOM 26 OP2 C B 25 43.597 9.092 49.602 1.00 59.92 O
ATOM 27 O5' C B 25 41.829 8.034 51.025 1.00 58.56 O
TER
Atoms:
OP1: (26.595,4.409,41.185)
OP2: (28.365,6.218,41.540)
C3': (27.164,5.028,46.470)
C1': (29.454,5.683,46.283)
C5': (27.403,3.753,44.272)
O6: (34.122,9.140,44.940)
O4': (29.265,4.621,45.404)
C8: (30.327,7.207,44.448)
C2: (33.200,7.138,47.734)
C6: (33.431,8.375,45.627)
C5: (32.174,7.809,45.318)
C4: (31.572,6.997,46.248)
P: (27.786,4.906,41.912)
C4': (27.980,4.050,45.629)
C2': (28.109,6.192,46.797)
O2': (28.228,6.479,48.171)
N1: (33.878,7.973,46.883)
N2: (33.806,6.843,48.899)
N3: (32.019,6.622,47.463)
N7: (31.381,7.930,44.182)
N9: (30.396,6.605,45.679)
O5': (27.459,4.945,43.475)
O3': (26.967,4.301,47.686)
OP2: (28.365,6.218,41.540)
C3': (27.164,5.028,46.470)
C1': (29.454,5.683,46.283)
C5': (27.403,3.753,44.272)
O6: (34.122,9.140,44.940)
O4': (29.265,4.621,45.404)
C8: (30.327,7.207,44.448)
C2: (33.200,7.138,47.734)
C6: (33.431,8.375,45.627)
C5: (32.174,7.809,45.318)
C4: (31.572,6.997,46.248)
P: (27.786,4.906,41.912)
C4': (27.980,4.050,45.629)
C2': (28.109,6.192,46.797)
O2': (28.228,6.479,48.171)
N1: (33.878,7.973,46.883)
N2: (33.806,6.843,48.899)
N3: (32.019,6.622,47.463)
N7: (31.381,7.930,44.182)
N9: (30.396,6.605,45.679)
O5': (27.459,4.945,43.475)
O3': (26.967,4.301,47.686)
OP1: (44.804,13.617,48.079)
OP2: (43.138,12.875,46.263)
C3': (41.594,11.063,50.693)
C1': (39.412,11.899,50.495)
C5': (42.665,13.267,50.020)
O4': (40.318,12.983,50.392)
C8: (39.445,11.996,47.958)
O2': (39.991,10.773,52.516)
C6: (36.646,10.148,46.910)
C5: (37.728,10.838,47.480)
C4: (37.828,10.823,48.854)
P: (43.416,13.582,47.543)
C4': (41.630,12.569,50.852)
C2': (40.170,10.733,51.116)
C2: (36.018,9.596,49.066)
N1: (35.788,9.525,47.748)
N3: (37.002,10.211,49.716)
N6: (36.426,10.080,45.595)
N7: (38.760,11.581,46.922)
N9: (38.927,11.585,49.158)
O5': (42.475,12.949,48.658)
O3': (42.571,10.405,51.483)
OP2: (43.138,12.875,46.263)
C3': (41.594,11.063,50.693)
C1': (39.412,11.899,50.495)
C5': (42.665,13.267,50.020)
O4': (40.318,12.983,50.392)
C8: (39.445,11.996,47.958)
O2': (39.991,10.773,52.516)
C6: (36.646,10.148,46.910)
C5: (37.728,10.838,47.480)
C4: (37.828,10.823,48.854)
P: (43.416,13.582,47.543)
C4': (41.630,12.569,50.852)
C2': (40.170,10.733,51.116)
C2: (36.018,9.596,49.066)
N1: (35.788,9.525,47.748)
N3: (37.002,10.211,49.716)
N6: (36.426,10.080,45.595)
N7: (38.760,11.581,46.922)
N9: (38.927,11.585,49.158)
O5': (42.475,12.949,48.658)
O3': (42.571,10.405,51.483)
Image (generated by PyMOL):