Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A110:A313
Extra
PDB:
ATOM 1 O3' G A 109 -14.034 35.916 108.097 1.00 12.59 O
ATOM 2 P G A 110 -14.430 37.297 107.421 1.00 14.00 P
ATOM 3 OP1 G A 110 -14.934 36.985 106.070 1.00 14.00 O
ATOM 4 OP2 G A 110 -13.265 38.197 107.570 1.00 14.00 O
ATOM 5 O5' G A 110 -15.632 37.795 108.330 1.00 14.00 O
ATOM 6 C5' G A 110 -16.932 37.269 108.138 1.00 14.00 C
ATOM 7 C4' G A 110 -17.826 37.534 109.323 1.00 14.00 C
ATOM 8 O4' G A 110 -17.119 37.244 110.559 1.00 14.00 O
ATOM 9 C3' G A 110 -18.296 38.964 109.521 1.00 14.00 C
ATOM 10 O3' G A 110 -19.325 39.364 108.616 1.00 14.00 O
ATOM 11 C2' G A 110 -18.728 38.921 110.975 1.00 14.00 C
ATOM 12 O2' G A 110 -19.929 38.176 111.117 1.00 14.00 O
ATOM 13 C1' G A 110 -17.579 38.109 111.576 1.00 14.00 C
ATOM 14 N9 G A 110 -16.455 38.976 111.992 1.00 14.00 N
ATOM 15 C8 G A 110 -15.128 38.900 111.616 1.00 14.00 C
ATOM 16 N7 G A 110 -14.373 39.840 112.142 1.00 14.00 N
ATOM 17 C5 G A 110 -15.258 40.587 112.908 1.00 14.00 C
ATOM 18 C6 G A 110 -15.057 41.741 113.714 1.00 14.00 C
ATOM 19 O6 G A 110 -14.015 42.366 113.939 1.00 14.00 O
ATOM 20 N1 G A 110 -16.229 42.189 114.316 1.00 14.00 N
ATOM 21 C2 G A 110 -17.459 41.599 114.170 1.00 14.00 C
ATOM 22 N2 G A 110 -18.485 42.162 114.828 1.00 14.00 N
ATOM 23 N3 G A 110 -17.664 40.523 113.432 1.00 14.00 N
ATOM 24 C4 G A 110 -16.536 40.072 112.827 1.00 14.00 C
ATOM 25 P G A 111 -19.304 40.853 107.986 1.00 15.85 P
ATOM 26 OP1 G A 111 -20.375 40.931 106.950 1.00 15.85 O
ATOM 27 OP2 G A 111 -17.904 41.129 107.582 1.00 15.85 O
ATOM 28 O5' G A 111 -19.695 41.750 109.244 1.00 15.85 O
TER
ATOM 1 O3' C B 312 -12.594 52.685 118.812 1.00 7.07 O
ATOM 2 P A B 313 -12.337 51.633 120.017 1.00 13.87 P
ATOM 3 OP1 A B 313 -12.246 52.424 121.270 1.00 13.87 O
ATOM 4 OP2 A B 313 -11.190 50.775 119.639 1.00 13.87 O
ATOM 5 O5' A B 313 -13.672 50.786 120.007 1.00 13.87 O
ATOM 6 C5' A B 313 -14.935 51.423 120.148 1.00 13.87 C
ATOM 7 C4' A B 313 -16.026 50.404 120.282 1.00 13.87 C
ATOM 8 O4' A B 313 -15.931 49.489 119.159 1.00 13.87 O
ATOM 9 C3' A B 313 -15.924 49.524 121.518 1.00 13.87 C
ATOM 10 O3' A B 313 -17.222 48.978 121.792 1.00 13.87 O
ATOM 11 C2' A B 313 -14.976 48.427 121.022 1.00 13.87 C
ATOM 12 O2' A B 313 -14.951 47.246 121.805 1.00 13.87 O
ATOM 13 C1' A B 313 -15.548 48.198 119.624 1.00 13.87 C
ATOM 14 N9 A B 313 -14.616 47.624 118.648 1.00 14.02 N
ATOM 15 C8 A B 313 -13.280 47.889 118.462 1.00 14.02 C
ATOM 16 N7 A B 313 -12.759 47.206 117.451 1.00 14.02 N
ATOM 17 C5 A B 313 -13.825 46.457 116.923 1.00 14.02 C
ATOM 18 C6 A B 313 -13.928 45.547 115.843 1.00 14.02 C
ATOM 19 N6 A B 313 -12.886 45.217 115.073 1.00 14.02 N
ATOM 20 N1 A B 313 -15.134 44.984 115.571 1.00 14.02 N
ATOM 21 C2 A B 313 -16.166 45.320 116.359 1.00 14.02 C
ATOM 22 N3 A B 313 -16.200 46.155 117.402 1.00 14.02 N
ATOM 23 C4 A B 313 -14.981 46.710 117.647 1.00 14.02 C
ATOM 24 P C B 314 -17.604 48.438 123.258 1.00 15.70 P
ATOM 25 OP1 C B 314 -16.403 48.583 124.114 1.00 15.70 O
ATOM 26 OP2 C B 314 -18.194 47.087 123.078 1.00 15.70 O
ATOM 27 O5' C B 314 -18.725 49.461 123.730 1.00 15.70 O
TER
ATOM 2 P G A 110 -14.430 37.297 107.421 1.00 14.00 P
ATOM 3 OP1 G A 110 -14.934 36.985 106.070 1.00 14.00 O
ATOM 4 OP2 G A 110 -13.265 38.197 107.570 1.00 14.00 O
ATOM 5 O5' G A 110 -15.632 37.795 108.330 1.00 14.00 O
ATOM 6 C5' G A 110 -16.932 37.269 108.138 1.00 14.00 C
ATOM 7 C4' G A 110 -17.826 37.534 109.323 1.00 14.00 C
ATOM 8 O4' G A 110 -17.119 37.244 110.559 1.00 14.00 O
ATOM 9 C3' G A 110 -18.296 38.964 109.521 1.00 14.00 C
ATOM 10 O3' G A 110 -19.325 39.364 108.616 1.00 14.00 O
ATOM 11 C2' G A 110 -18.728 38.921 110.975 1.00 14.00 C
ATOM 12 O2' G A 110 -19.929 38.176 111.117 1.00 14.00 O
ATOM 13 C1' G A 110 -17.579 38.109 111.576 1.00 14.00 C
ATOM 14 N9 G A 110 -16.455 38.976 111.992 1.00 14.00 N
ATOM 15 C8 G A 110 -15.128 38.900 111.616 1.00 14.00 C
ATOM 16 N7 G A 110 -14.373 39.840 112.142 1.00 14.00 N
ATOM 17 C5 G A 110 -15.258 40.587 112.908 1.00 14.00 C
ATOM 18 C6 G A 110 -15.057 41.741 113.714 1.00 14.00 C
ATOM 19 O6 G A 110 -14.015 42.366 113.939 1.00 14.00 O
ATOM 20 N1 G A 110 -16.229 42.189 114.316 1.00 14.00 N
ATOM 21 C2 G A 110 -17.459 41.599 114.170 1.00 14.00 C
ATOM 22 N2 G A 110 -18.485 42.162 114.828 1.00 14.00 N
ATOM 23 N3 G A 110 -17.664 40.523 113.432 1.00 14.00 N
ATOM 24 C4 G A 110 -16.536 40.072 112.827 1.00 14.00 C
ATOM 25 P G A 111 -19.304 40.853 107.986 1.00 15.85 P
ATOM 26 OP1 G A 111 -20.375 40.931 106.950 1.00 15.85 O
ATOM 27 OP2 G A 111 -17.904 41.129 107.582 1.00 15.85 O
ATOM 28 O5' G A 111 -19.695 41.750 109.244 1.00 15.85 O
TER
ATOM 1 O3' C B 312 -12.594 52.685 118.812 1.00 7.07 O
ATOM 2 P A B 313 -12.337 51.633 120.017 1.00 13.87 P
ATOM 3 OP1 A B 313 -12.246 52.424 121.270 1.00 13.87 O
ATOM 4 OP2 A B 313 -11.190 50.775 119.639 1.00 13.87 O
ATOM 5 O5' A B 313 -13.672 50.786 120.007 1.00 13.87 O
ATOM 6 C5' A B 313 -14.935 51.423 120.148 1.00 13.87 C
ATOM 7 C4' A B 313 -16.026 50.404 120.282 1.00 13.87 C
ATOM 8 O4' A B 313 -15.931 49.489 119.159 1.00 13.87 O
ATOM 9 C3' A B 313 -15.924 49.524 121.518 1.00 13.87 C
ATOM 10 O3' A B 313 -17.222 48.978 121.792 1.00 13.87 O
ATOM 11 C2' A B 313 -14.976 48.427 121.022 1.00 13.87 C
ATOM 12 O2' A B 313 -14.951 47.246 121.805 1.00 13.87 O
ATOM 13 C1' A B 313 -15.548 48.198 119.624 1.00 13.87 C
ATOM 14 N9 A B 313 -14.616 47.624 118.648 1.00 14.02 N
ATOM 15 C8 A B 313 -13.280 47.889 118.462 1.00 14.02 C
ATOM 16 N7 A B 313 -12.759 47.206 117.451 1.00 14.02 N
ATOM 17 C5 A B 313 -13.825 46.457 116.923 1.00 14.02 C
ATOM 18 C6 A B 313 -13.928 45.547 115.843 1.00 14.02 C
ATOM 19 N6 A B 313 -12.886 45.217 115.073 1.00 14.02 N
ATOM 20 N1 A B 313 -15.134 44.984 115.571 1.00 14.02 N
ATOM 21 C2 A B 313 -16.166 45.320 116.359 1.00 14.02 C
ATOM 22 N3 A B 313 -16.200 46.155 117.402 1.00 14.02 N
ATOM 23 C4 A B 313 -14.981 46.710 117.647 1.00 14.02 C
ATOM 24 P C B 314 -17.604 48.438 123.258 1.00 15.70 P
ATOM 25 OP1 C B 314 -16.403 48.583 124.114 1.00 15.70 O
ATOM 26 OP2 C B 314 -18.194 47.087 123.078 1.00 15.70 O
ATOM 27 O5' C B 314 -18.725 49.461 123.730 1.00 15.70 O
TER
Atoms:
OP1: (-14.934,36.985,106.070)
OP2: (-13.265,38.197,107.570)
C3': (-18.296,38.964,109.521)
C1': (-17.579,38.109,111.576)
C5': (-16.932,37.269,108.138)
O6: (-14.015,42.366,113.939)
O4': (-17.119,37.244,110.559)
C8: (-15.128,38.900,111.616)
C2: (-17.459,41.599,114.170)
C6: (-15.057,41.741,113.714)
C5: (-15.258,40.587,112.908)
C4: (-16.536,40.072,112.827)
P: (-14.430,37.297,107.421)
C4': (-17.826,37.534,109.323)
C2': (-18.728,38.921,110.975)
O2': (-19.929,38.176,111.117)
N1: (-16.229,42.189,114.316)
N2: (-18.485,42.162,114.828)
N3: (-17.664,40.523,113.432)
N7: (-14.373,39.840,112.142)
N9: (-16.455,38.976,111.992)
O5': (-15.632,37.795,108.330)
O3': (-19.325,39.364,108.616)
OP2: (-13.265,38.197,107.570)
C3': (-18.296,38.964,109.521)
C1': (-17.579,38.109,111.576)
C5': (-16.932,37.269,108.138)
O6: (-14.015,42.366,113.939)
O4': (-17.119,37.244,110.559)
C8: (-15.128,38.900,111.616)
C2: (-17.459,41.599,114.170)
C6: (-15.057,41.741,113.714)
C5: (-15.258,40.587,112.908)
C4: (-16.536,40.072,112.827)
P: (-14.430,37.297,107.421)
C4': (-17.826,37.534,109.323)
C2': (-18.728,38.921,110.975)
O2': (-19.929,38.176,111.117)
N1: (-16.229,42.189,114.316)
N2: (-18.485,42.162,114.828)
N3: (-17.664,40.523,113.432)
N7: (-14.373,39.840,112.142)
N9: (-16.455,38.976,111.992)
O5': (-15.632,37.795,108.330)
O3': (-19.325,39.364,108.616)
OP1: (-12.246,52.424,121.270)
OP2: (-11.190,50.775,119.639)
C3': (-15.924,49.524,121.518)
C1': (-15.548,48.198,119.624)
C5': (-14.935,51.423,120.148)
O4': (-15.931,49.489,119.159)
C8: (-13.280,47.889,118.462)
O2': (-14.951,47.246,121.805)
C6: (-13.928,45.547,115.843)
C5: (-13.825,46.457,116.923)
C4: (-14.981,46.710,117.647)
P: (-12.337,51.633,120.017)
C4': (-16.026,50.404,120.282)
C2': (-14.976,48.427,121.022)
C2: (-16.166,45.320,116.359)
N1: (-15.134,44.984,115.571)
N3: (-16.200,46.155,117.402)
N6: (-12.886,45.217,115.073)
N7: (-12.759,47.206,117.451)
N9: (-14.616,47.624,118.648)
O5': (-13.672,50.786,120.007)
O3': (-17.222,48.978,121.792)
OP2: (-11.190,50.775,119.639)
C3': (-15.924,49.524,121.518)
C1': (-15.548,48.198,119.624)
C5': (-14.935,51.423,120.148)
O4': (-15.931,49.489,119.159)
C8: (-13.280,47.889,118.462)
O2': (-14.951,47.246,121.805)
C6: (-13.928,45.547,115.843)
C5: (-13.825,46.457,116.923)
C4: (-14.981,46.710,117.647)
P: (-12.337,51.633,120.017)
C4': (-16.026,50.404,120.282)
C2': (-14.976,48.427,121.022)
C2: (-16.166,45.320,116.359)
N1: (-15.134,44.984,115.571)
N3: (-16.200,46.155,117.402)
N6: (-12.886,45.217,115.073)
N7: (-12.759,47.206,117.451)
N9: (-14.616,47.624,118.648)
O5': (-13.672,50.786,120.007)
O3': (-17.222,48.978,121.792)
Image (generated by PyMOL):