ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A908:A1203

Extra

PDB:
ATOM 1 O3' G A 907 136.473 23.137 -7.739 1.00 70.13 O
ATOM 2 P G A 908 137.980 22.667 -7.914 1.00 70.54 P
ATOM 3 OP1 G A 908 138.168 21.436 -7.081 1.00 69.81 O
ATOM 4 OP2 G A 908 138.798 23.876 -7.652 1.00 73.91 O
ATOM 5 O5' G A 908 138.070 22.335 -9.472 1.00 65.64 O
ATOM 6 C5' G A 908 137.341 21.247 -10.031 1.00 66.34 C
ATOM 7 C4' G A 908 137.988 20.791 -11.318 1.00 65.77 C
ATOM 8 O4' G A 908 137.700 21.755 -12.358 1.00 69.28 O
ATOM 9 C3' G A 908 139.506 20.698 -11.272 1.00 70.00 C
ATOM 10 O3' G A 908 139.988 19.470 -10.722 1.00 71.32 O
ATOM 11 C2' G A 908 139.906 20.928 -12.724 1.00 70.48 C
ATOM 12 O2' G A 908 139.910 19.779 -13.532 1.00 64.61 O
ATOM 13 C1' G A 908 138.827 21.903 -13.197 1.00 72.28 C
ATOM 14 N9 G A 908 139.279 23.282 -13.088 1.00 76.94 N
ATOM 15 C8 G A 908 138.702 24.289 -12.361 1.00 74.51 C
ATOM 16 N7 G A 908 139.357 25.413 -12.439 1.00 77.59 N
ATOM 17 C5 G A 908 140.426 25.130 -13.272 1.00 80.31 C
ATOM 18 C6 G A 908 141.481 25.958 -13.726 1.00 82.34 C
ATOM 19 O6 G A 908 141.682 27.155 -13.487 1.00 84.17 O
ATOM 20 N1 G A 908 142.356 25.261 -14.550 1.00 82.75 N
ATOM 21 C2 G A 908 142.227 23.944 -14.898 1.00 83.50 C
ATOM 22 N2 G A 908 143.173 23.456 -15.699 1.00 83.06 N
ATOM 23 N3 G A 908 141.246 23.164 -14.491 1.00 82.80 N
ATOM 24 C4 G A 908 140.388 23.820 -13.684 1.00 80.54 C
ATOM 25 P A A 909 140.967 19.501 -9.437 1.00 81.13 P
ATOM 26 OP1 A A 909 140.971 18.149 -8.808 1.00 73.15 O
ATOM 27 OP2 A A 909 140.600 20.691 -8.619 1.00 72.47 O
ATOM 28 O5' A A 909 142.414 19.753 -10.052 1.00 75.65 O
TER

ATOM 1 O3' U B1202 152.682 32.885 -12.005 1.00 80.85 O
ATOM 2 P A B1203 152.353 33.424 -13.488 1.00 83.92 P
ATOM 3 OP1 A B1203 153.465 34.323 -13.881 1.00 81.52 O
ATOM 4 OP2 A B1203 150.960 33.943 -13.519 1.00 87.32 O
ATOM 5 O5' A B1203 152.435 32.090 -14.368 1.00 85.49 O
ATOM 6 C5' A B1203 151.410 31.721 -15.300 1.00 84.35 C
ATOM 7 C4' A B1203 151.388 30.212 -15.505 1.00 89.24 C
ATOM 8 O4' A B1203 150.741 29.560 -14.376 1.00 89.38 O
ATOM 9 C3' A B1203 150.575 29.767 -16.709 1.00 89.71 C
ATOM 10 O3' A B1203 151.367 29.815 -17.888 1.00 91.37 O
ATOM 11 C2' A B1203 150.134 28.357 -16.330 1.00 85.53 C
ATOM 12 O2' A B1203 151.129 27.376 -16.532 1.00 83.30 O
ATOM 13 C1' A B1203 149.904 28.510 -14.832 1.00 82.50 C
ATOM 14 N9 A B1203 148.525 28.880 -14.527 1.00 78.23 N
ATOM 15 C8 A B1203 148.066 30.129 -14.217 1.00 76.03 C
ATOM 16 N7 A B1203 146.794 30.166 -13.929 1.00 76.91 N
ATOM 17 C5 A B1203 146.382 28.854 -14.071 1.00 77.08 C
ATOM 18 C6 A B1203 145.137 28.235 -13.888 1.00 79.99 C
ATOM 19 N6 A B1203 144.044 28.886 -13.484 1.00 77.50 N
ATOM 20 N1 A B1203 145.052 26.908 -14.129 1.00 78.75 N
ATOM 21 C2 A B1203 146.150 26.263 -14.516 1.00 79.10 C
ATOM 22 N3 A B1203 147.383 26.735 -14.711 1.00 84.51 N
ATOM 23 C4 A B1203 147.432 28.053 -14.464 1.00 80.13 C
ATOM 24 P C B1204 150.809 30.574 -19.195 1.00 91.62 P
ATOM 25 OP1 C B1204 151.973 31.085 -19.957 1.00 89.57 O
ATOM 26 OP2 C B1204 149.730 31.518 -18.786 1.00 91.25 O
ATOM 27 O5' C B1204 150.137 29.405 -20.045 1.00 90.30 O
TER

Atoms:
OP1: (138.168,21.436,-7.081)
OP2: (138.798,23.876,-7.652)
C3': (139.506,20.698,-11.272)
C1': (138.827,21.903,-13.197)
C5': (137.341,21.247,-10.031)
O6: (141.682,27.155,-13.487)
O4': (137.700,21.755,-12.358)
C8: (138.702,24.289,-12.361)
C2: (142.227,23.944,-14.898)
C6: (141.481,25.958,-13.726)
C5: (140.426,25.130,-13.272)
C4: (140.388,23.820,-13.684)
P: (137.980,22.667,-7.914)
C4': (137.988,20.791,-11.318)
C2': (139.906,20.928,-12.724)
O2': (139.910,19.779,-13.532)
N1: (142.356,25.261,-14.550)
N2: (143.173,23.456,-15.699)
N3: (141.246,23.164,-14.491)
N7: (139.357,25.413,-12.439)
N9: (139.279,23.282,-13.088)
O5': (138.070,22.335,-9.472)
O3': (139.988,19.470,-10.722)
OP1: (153.465,34.323,-13.881)
OP2: (150.960,33.943,-13.519)
C3': (150.575,29.767,-16.709)
C1': (149.904,28.510,-14.832)
C5': (151.410,31.721,-15.300)
O4': (150.741,29.560,-14.376)
C8: (148.066,30.129,-14.217)
O2': (151.129,27.376,-16.532)
C6: (145.137,28.235,-13.888)
C5: (146.382,28.854,-14.071)
C4: (147.432,28.053,-14.464)
P: (152.353,33.424,-13.488)
C4': (151.388,30.212,-15.505)
C2': (150.134,28.357,-16.330)
C2: (146.150,26.263,-14.516)
N1: (145.052,26.908,-14.129)
N3: (147.383,26.735,-14.711)
N6: (144.044,28.886,-13.484)
N7: (146.794,30.166,-13.929)
N9: (148.525,28.880,-14.527)
O5': (152.435,32.090,-14.368)
O3': (151.367,29.815,-17.888)
Image (generated by PyMOL):
PyMOL image
show in jmol