Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A943:A1234
Extra
PDB:
ATOM 1 O3' G A 942 -83.468 122.050 75.865 1.00 57.32 O
ATOM 2 P G A 943 -85.002 122.454 76.170 1.00 59.27 P
ATOM 3 OP1 G A 943 -85.412 121.753 77.423 1.00 59.27 O
ATOM 4 OP2 G A 943 -85.776 122.206 74.931 1.00 59.27 O
ATOM 5 O5' G A 943 -84.895 124.012 76.434 1.00 59.27 O
ATOM 6 C5' G A 943 -84.399 124.507 77.659 1.00 59.27 C
ATOM 7 C4' G A 943 -85.038 125.812 77.990 1.00 59.27 C
ATOM 8 O4' G A 943 -84.607 126.810 77.030 1.00 59.27 O
ATOM 9 C3' G A 943 -86.552 125.826 77.892 1.00 59.27 C
ATOM 10 O3' G A 943 -87.185 125.321 79.050 1.00 59.27 O
ATOM 11 C2' G A 943 -86.861 127.284 77.607 1.00 59.27 C
ATOM 12 O2' G A 943 -86.819 128.052 78.796 1.00 59.27 O
ATOM 13 C1' G A 943 -85.677 127.676 76.723 1.00 59.27 C
ATOM 14 N9 G A 943 -85.994 127.527 75.297 1.00 59.82 N
ATOM 15 C8 G A 943 -85.333 126.781 74.349 1.00 59.82 C
ATOM 16 N7 G A 943 -85.892 126.852 73.168 1.00 59.82 N
ATOM 17 C5 G A 943 -86.983 127.694 73.360 1.00 59.82 C
ATOM 18 C6 G A 943 -87.969 128.154 72.446 1.00 59.82 C
ATOM 19 O6 G A 943 -88.059 127.885 71.239 1.00 59.82 O
ATOM 20 N1 G A 943 -88.896 129.001 73.077 1.00 59.82 N
ATOM 21 C2 G A 943 -88.876 129.357 74.410 1.00 59.82 C
ATOM 22 N2 G A 943 -89.846 130.173 74.830 1.00 59.82 N
ATOM 23 N3 G A 943 -87.965 128.938 75.269 1.00 59.82 N
ATOM 24 C4 G A 943 -87.061 128.119 74.675 1.00 59.82 C
ATOM 25 P A A 944 -88.490 124.399 78.908 1.00 43.34 P
ATOM 26 OP1 A A 944 -88.904 123.999 80.274 1.00 43.34 O
ATOM 27 OP2 A A 944 -88.165 123.332 77.912 1.00 43.34 O
ATOM 28 O5' A A 944 -89.559 125.409 78.305 1.00 43.34 O
TER
ATOM 1 O3' U B1233 -97.964 126.602 64.152 1.00 58.03 O
ATOM 2 P A B1234 -97.443 128.049 63.714 1.00 60.31 P
ATOM 3 OP1 A B1234 -98.416 128.593 62.737 1.00 60.31 O
ATOM 4 OP2 A B1234 -96.020 127.905 63.307 1.00 60.31 O
ATOM 5 O5' A B1234 -97.532 128.859 65.066 1.00 60.31 O
ATOM 6 C5' A B1234 -96.665 129.943 65.303 1.00 60.31 C
ATOM 7 C4' A B1234 -96.710 130.382 66.735 1.00 60.31 C
ATOM 8 O4' A B1234 -96.129 129.356 67.584 1.00 60.31 O
ATOM 9 C3' A B1234 -95.926 131.641 67.040 1.00 60.31 C
ATOM 10 O3' A B1234 -96.691 132.806 66.789 1.00 60.31 O
ATOM 11 C2' A B1234 -95.528 131.461 68.502 1.00 60.31 C
ATOM 12 O2' A B1234 -96.588 131.849 69.364 1.00 60.31 O
ATOM 13 C1' A B1234 -95.345 129.941 68.597 1.00 60.31 C
ATOM 14 N9 A B1234 -93.937 129.520 68.392 1.00 60.07 N
ATOM 15 C8 A B1234 -93.370 129.145 67.193 1.00 60.07 C
ATOM 16 N7 A B1234 -92.111 128.794 67.266 1.00 60.07 N
ATOM 17 C5 A B1234 -91.824 128.936 68.611 1.00 60.07 C
ATOM 18 C6 A B1234 -90.638 128.715 69.326 1.00 60.07 C
ATOM 19 N6 A B1234 -89.509 128.298 68.733 1.00 60.07 N
ATOM 20 N1 A B1234 -90.663 128.942 70.661 1.00 60.07 N
ATOM 21 C2 A B1234 -91.806 129.362 71.221 1.00 60.07 C
ATOM 22 N3 A B1234 -92.982 129.609 70.645 1.00 60.07 N
ATOM 23 C4 A B1234 -92.930 129.371 69.323 1.00 60.07 C
ATOM 24 P C B1235 -96.054 134.063 66.018 1.00 55.90 P
ATOM 25 OP1 C B1235 -97.149 134.704 65.255 1.00 55.90 O
ATOM 26 OP2 C B1235 -94.856 133.580 65.281 1.00 55.90 O
ATOM 27 O5' C B1235 -95.616 135.000 67.225 1.00 55.90 O
TER
ATOM 2 P G A 943 -85.002 122.454 76.170 1.00 59.27 P
ATOM 3 OP1 G A 943 -85.412 121.753 77.423 1.00 59.27 O
ATOM 4 OP2 G A 943 -85.776 122.206 74.931 1.00 59.27 O
ATOM 5 O5' G A 943 -84.895 124.012 76.434 1.00 59.27 O
ATOM 6 C5' G A 943 -84.399 124.507 77.659 1.00 59.27 C
ATOM 7 C4' G A 943 -85.038 125.812 77.990 1.00 59.27 C
ATOM 8 O4' G A 943 -84.607 126.810 77.030 1.00 59.27 O
ATOM 9 C3' G A 943 -86.552 125.826 77.892 1.00 59.27 C
ATOM 10 O3' G A 943 -87.185 125.321 79.050 1.00 59.27 O
ATOM 11 C2' G A 943 -86.861 127.284 77.607 1.00 59.27 C
ATOM 12 O2' G A 943 -86.819 128.052 78.796 1.00 59.27 O
ATOM 13 C1' G A 943 -85.677 127.676 76.723 1.00 59.27 C
ATOM 14 N9 G A 943 -85.994 127.527 75.297 1.00 59.82 N
ATOM 15 C8 G A 943 -85.333 126.781 74.349 1.00 59.82 C
ATOM 16 N7 G A 943 -85.892 126.852 73.168 1.00 59.82 N
ATOM 17 C5 G A 943 -86.983 127.694 73.360 1.00 59.82 C
ATOM 18 C6 G A 943 -87.969 128.154 72.446 1.00 59.82 C
ATOM 19 O6 G A 943 -88.059 127.885 71.239 1.00 59.82 O
ATOM 20 N1 G A 943 -88.896 129.001 73.077 1.00 59.82 N
ATOM 21 C2 G A 943 -88.876 129.357 74.410 1.00 59.82 C
ATOM 22 N2 G A 943 -89.846 130.173 74.830 1.00 59.82 N
ATOM 23 N3 G A 943 -87.965 128.938 75.269 1.00 59.82 N
ATOM 24 C4 G A 943 -87.061 128.119 74.675 1.00 59.82 C
ATOM 25 P A A 944 -88.490 124.399 78.908 1.00 43.34 P
ATOM 26 OP1 A A 944 -88.904 123.999 80.274 1.00 43.34 O
ATOM 27 OP2 A A 944 -88.165 123.332 77.912 1.00 43.34 O
ATOM 28 O5' A A 944 -89.559 125.409 78.305 1.00 43.34 O
TER
ATOM 1 O3' U B1233 -97.964 126.602 64.152 1.00 58.03 O
ATOM 2 P A B1234 -97.443 128.049 63.714 1.00 60.31 P
ATOM 3 OP1 A B1234 -98.416 128.593 62.737 1.00 60.31 O
ATOM 4 OP2 A B1234 -96.020 127.905 63.307 1.00 60.31 O
ATOM 5 O5' A B1234 -97.532 128.859 65.066 1.00 60.31 O
ATOM 6 C5' A B1234 -96.665 129.943 65.303 1.00 60.31 C
ATOM 7 C4' A B1234 -96.710 130.382 66.735 1.00 60.31 C
ATOM 8 O4' A B1234 -96.129 129.356 67.584 1.00 60.31 O
ATOM 9 C3' A B1234 -95.926 131.641 67.040 1.00 60.31 C
ATOM 10 O3' A B1234 -96.691 132.806 66.789 1.00 60.31 O
ATOM 11 C2' A B1234 -95.528 131.461 68.502 1.00 60.31 C
ATOM 12 O2' A B1234 -96.588 131.849 69.364 1.00 60.31 O
ATOM 13 C1' A B1234 -95.345 129.941 68.597 1.00 60.31 C
ATOM 14 N9 A B1234 -93.937 129.520 68.392 1.00 60.07 N
ATOM 15 C8 A B1234 -93.370 129.145 67.193 1.00 60.07 C
ATOM 16 N7 A B1234 -92.111 128.794 67.266 1.00 60.07 N
ATOM 17 C5 A B1234 -91.824 128.936 68.611 1.00 60.07 C
ATOM 18 C6 A B1234 -90.638 128.715 69.326 1.00 60.07 C
ATOM 19 N6 A B1234 -89.509 128.298 68.733 1.00 60.07 N
ATOM 20 N1 A B1234 -90.663 128.942 70.661 1.00 60.07 N
ATOM 21 C2 A B1234 -91.806 129.362 71.221 1.00 60.07 C
ATOM 22 N3 A B1234 -92.982 129.609 70.645 1.00 60.07 N
ATOM 23 C4 A B1234 -92.930 129.371 69.323 1.00 60.07 C
ATOM 24 P C B1235 -96.054 134.063 66.018 1.00 55.90 P
ATOM 25 OP1 C B1235 -97.149 134.704 65.255 1.00 55.90 O
ATOM 26 OP2 C B1235 -94.856 133.580 65.281 1.00 55.90 O
ATOM 27 O5' C B1235 -95.616 135.000 67.225 1.00 55.90 O
TER
Atoms:
OP1: (-85.412,121.753,77.423)
OP2: (-85.776,122.206,74.931)
C3': (-86.552,125.826,77.892)
C1': (-85.677,127.676,76.723)
C5': (-84.399,124.507,77.659)
O6: (-88.059,127.885,71.239)
O4': (-84.607,126.810,77.030)
C8: (-85.333,126.781,74.349)
C2: (-88.876,129.357,74.410)
C6: (-87.969,128.154,72.446)
C5: (-86.983,127.694,73.360)
C4: (-87.061,128.119,74.675)
P: (-85.002,122.454,76.170)
C4': (-85.038,125.812,77.990)
C2': (-86.861,127.284,77.607)
O2': (-86.819,128.052,78.796)
N1: (-88.896,129.001,73.077)
N2: (-89.846,130.173,74.830)
N3: (-87.965,128.938,75.269)
N7: (-85.892,126.852,73.168)
N9: (-85.994,127.527,75.297)
O5': (-84.895,124.012,76.434)
O3': (-87.185,125.321,79.050)
OP2: (-85.776,122.206,74.931)
C3': (-86.552,125.826,77.892)
C1': (-85.677,127.676,76.723)
C5': (-84.399,124.507,77.659)
O6: (-88.059,127.885,71.239)
O4': (-84.607,126.810,77.030)
C8: (-85.333,126.781,74.349)
C2: (-88.876,129.357,74.410)
C6: (-87.969,128.154,72.446)
C5: (-86.983,127.694,73.360)
C4: (-87.061,128.119,74.675)
P: (-85.002,122.454,76.170)
C4': (-85.038,125.812,77.990)
C2': (-86.861,127.284,77.607)
O2': (-86.819,128.052,78.796)
N1: (-88.896,129.001,73.077)
N2: (-89.846,130.173,74.830)
N3: (-87.965,128.938,75.269)
N7: (-85.892,126.852,73.168)
N9: (-85.994,127.527,75.297)
O5': (-84.895,124.012,76.434)
O3': (-87.185,125.321,79.050)
OP1: (-98.416,128.593,62.737)
OP2: (-96.020,127.905,63.307)
C3': (-95.926,131.641,67.040)
C1': (-95.345,129.941,68.597)
C5': (-96.665,129.943,65.303)
O4': (-96.129,129.356,67.584)
C8: (-93.370,129.145,67.193)
O2': (-96.588,131.849,69.364)
C6: (-90.638,128.715,69.326)
C5: (-91.824,128.936,68.611)
C4: (-92.930,129.371,69.323)
P: (-97.443,128.049,63.714)
C4': (-96.710,130.382,66.735)
C2': (-95.528,131.461,68.502)
C2: (-91.806,129.362,71.221)
N1: (-90.663,128.942,70.661)
N3: (-92.982,129.609,70.645)
N6: (-89.509,128.298,68.733)
N7: (-92.111,128.794,67.266)
N9: (-93.937,129.520,68.392)
O5': (-97.532,128.859,65.066)
O3': (-96.691,132.806,66.789)
OP2: (-96.020,127.905,63.307)
C3': (-95.926,131.641,67.040)
C1': (-95.345,129.941,68.597)
C5': (-96.665,129.943,65.303)
O4': (-96.129,129.356,67.584)
C8: (-93.370,129.145,67.193)
O2': (-96.588,131.849,69.364)
C6: (-90.638,128.715,69.326)
C5: (-91.824,128.936,68.611)
C4: (-92.930,129.371,69.323)
P: (-97.443,128.049,63.714)
C4': (-96.710,130.382,66.735)
C2': (-95.528,131.461,68.502)
C2: (-91.806,129.362,71.221)
N1: (-90.663,128.942,70.661)
N3: (-92.982,129.609,70.645)
N6: (-89.509,128.298,68.733)
N7: (-92.111,128.794,67.266)
N9: (-93.937,129.520,68.392)
O5': (-97.532,128.859,65.066)
O3': (-96.691,132.806,66.789)
Image (generated by PyMOL):