ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01016:02371

Extra

PDB:
ATOM 1 O3' U A1015 62.570 91.856 115.731 1.00 42.15 O
ATOM 2 P A A1016 61.644 91.588 114.448 1.00 42.15 P
ATOM 3 OP1 A A1016 60.685 90.513 114.803 1.00 42.76 O
ATOM 4 OP2 A A1016 62.551 91.404 113.294 1.00 40.43 O
ATOM 5 O5' A A1016 60.822 92.942 114.248 1.00 40.93 O
ATOM 6 C5' A A1016 59.888 93.393 115.251 1.00 41.32 C
ATOM 7 C4' A A1016 59.648 94.883 115.123 1.00 41.55 C
ATOM 8 O4' A A1016 60.929 95.558 115.084 1.00 41.54 O
ATOM 9 C3' A A1016 58.913 95.343 113.873 1.00 41.04 C
ATOM 10 O3' A A1016 57.508 95.325 114.142 1.00 41.72 O
ATOM 11 C2' A A1016 59.426 96.767 113.697 1.00 40.63 C
ATOM 12 O2' A A1016 58.778 97.664 114.569 1.00 40.94 O
ATOM 13 C1' A A1016 60.874 96.638 114.177 1.00 40.04 C
ATOM 14 N9 A A1016 61.895 96.414 113.150 1.00 36.99 N
ATOM 15 C8 A A1016 62.403 95.216 112.704 1.00 34.92 C
ATOM 16 N7 A A1016 63.360 95.345 111.821 1.00 32.18 N
ATOM 17 C5 A A1016 63.489 96.719 111.668 1.00 33.18 C
ATOM 18 C6 A A1016 64.354 97.510 110.883 1.00 32.95 C
ATOM 19 N6 A A1016 65.308 97.009 110.094 1.00 32.95 N
ATOM 20 N1 A A1016 64.208 98.850 110.946 1.00 31.07 N
ATOM 21 C2 A A1016 63.265 99.352 111.753 1.00 33.33 C
ATOM 22 N3 A A1016 62.404 98.715 112.550 1.00 32.89 N
ATOM 23 C4 A A1016 62.574 97.387 112.461 1.00 33.88 C
ATOM 24 P A A1017 56.452 95.022 112.964 1.00 42.92 P
ATOM 25 OP1 A A1017 55.115 94.896 113.596 1.00 43.84 O
ATOM 26 OP2 A A1017 56.957 93.920 112.111 1.00 42.60 O
ATOM 27 O5' A A1017 56.445 96.361 112.106 1.00 43.60 O
TER

ATOM 1 O3' G B2370 71.618 103.212 108.765 1.00 41.58 O
ATOM 2 P C B2371 70.821 103.335 107.374 1.00 40.31 P
ATOM 3 OP1 C B2371 71.652 102.663 106.336 1.00 40.03 O
ATOM 4 OP2 C B2371 70.400 104.745 107.180 1.00 40.13 O
ATOM 5 O5' C B2371 69.516 102.451 107.595 1.00 40.38 O
ATOM 6 C5' C B2371 69.616 101.045 107.867 1.00 41.11 C
ATOM 7 C4' C B2371 68.250 100.477 108.143 1.00 42.06 C
ATOM 8 O4' C B2371 67.678 101.139 109.301 1.00 42.73 O
ATOM 9 C3' C B2371 67.226 100.710 107.046 1.00 42.15 C
ATOM 10 O3' C B2371 67.358 99.731 106.031 1.00 42.38 O
ATOM 11 C2' C B2371 65.910 100.593 107.804 1.00 42.21 C
ATOM 12 O2' C B2371 65.542 99.254 108.071 1.00 41.27 O
ATOM 13 C1' C B2371 66.274 101.272 109.127 1.00 42.05 C
ATOM 14 N1 C B2371 65.920 102.704 109.181 1.00 41.58 N
ATOM 15 C2 C B2371 64.589 103.057 109.449 1.00 41.40 C
ATOM 16 O2 C B2371 63.749 102.159 109.605 1.00 42.25 O
ATOM 17 N3 C B2371 64.255 104.364 109.530 1.00 40.92 N
ATOM 18 C4 C B2371 65.186 105.304 109.354 1.00 41.06 C
ATOM 19 N4 C B2371 64.809 106.580 109.460 1.00 40.80 N
ATOM 20 C5 C B2371 66.545 104.977 109.066 1.00 40.65 C
ATOM 21 C6 C B2371 66.865 103.678 108.987 1.00 41.87 C
ATOM 22 P U B2372 67.033 100.110 104.505 1.00 41.85 P
ATOM 23 OP1 U B2372 67.305 98.881 103.714 1.00 41.88 O
ATOM 24 OP2 U B2372 67.728 101.377 104.161 1.00 40.85 O
ATOM 25 O5' U B2372 65.467 100.387 104.496 1.00 42.05 O
TER

Atoms:
OP1: (60.685,90.513,114.803)
OP2: (62.551,91.404,113.294)
C3': (58.913,95.343,113.873)
C1': (60.874,96.638,114.177)
C5': (59.888,93.393,115.251)
O4': (60.929,95.558,115.084)
C8: (62.403,95.216,112.704)
O2': (58.778,97.664,114.569)
C6: (64.354,97.510,110.883)
C5: (63.489,96.719,111.668)
C4: (62.574,97.387,112.461)
P: (61.644,91.588,114.448)
C4': (59.648,94.883,115.123)
C2': (59.426,96.767,113.697)
C2: (63.265,99.352,111.753)
N1: (64.208,98.850,110.946)
N3: (62.404,98.715,112.550)
N6: (65.308,97.009,110.094)
N7: (63.360,95.345,111.821)
N9: (61.895,96.414,113.150)
O5': (60.822,92.942,114.248)
O3': (57.508,95.325,114.142)
C2: (64.589,103.057,109.449)
OP1: (71.652,102.663,106.336)
OP2: (70.400,104.745,107.180)
C4: (65.186,105.304,109.354)
O5': (69.516,102.451,107.595)
C3': (67.226,100.710,107.046)
C1': (66.274,101.272,109.127)
O4': (67.678,101.139,109.301)
C5': (69.616,101.045,107.867)
P: (70.821,103.335,107.374)
O2: (63.749,102.159,109.605)
C4': (68.250,100.477,108.143)
C2': (65.910,100.593,107.804)
O2': (65.542,99.254,108.071)
N1: (65.920,102.704,109.181)
N3: (64.255,104.364,109.530)
N4: (64.809,106.580,109.460)
C6: (66.865,103.678,108.987)
C5: (66.545,104.977,109.066)
O3': (67.358,99.731,106.031)
Image (generated by PyMOL):
PyMOL image
show in jmol