ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:02037:02494

Extra

PDB:
ATOM 1 O3' G A2036 54.574 148.141 108.933 1.00 30.54 O
ATOM 2 P G A2037 55.513 147.596 107.748 1.00 31.33 P
ATOM 3 OP1 G A2037 56.551 148.634 107.560 1.00 34.03 O
ATOM 4 OP2 G A2037 54.723 147.140 106.592 1.00 31.40 O
ATOM 5 O5' G A2037 56.211 146.321 108.382 1.00 28.45 O
ATOM 6 C5' G A2037 57.011 146.445 109.560 1.00 26.55 C
ATOM 7 C4' G A2037 56.868 145.209 110.394 1.00 25.26 C
ATOM 8 O4' G A2037 55.480 145.063 110.785 1.00 25.07 O
ATOM 9 C3' G A2037 57.153 143.920 109.652 1.00 26.30 C
ATOM 10 O3' G A2037 58.539 143.663 109.534 1.00 26.02 O
ATOM 11 C2' G A2037 56.404 142.894 110.489 1.00 26.33 C
ATOM 12 O2' G A2037 57.083 142.518 111.674 1.00 28.77 O
ATOM 13 C1' G A2037 55.148 143.687 110.851 1.00 25.70 C
ATOM 14 N9 G A2037 54.053 143.425 109.925 1.00 26.20 N
ATOM 15 C8 G A2037 53.890 143.924 108.653 1.00 25.34 C
ATOM 16 N7 G A2037 52.832 143.452 108.053 1.00 25.53 N
ATOM 17 C5 G A2037 52.256 142.604 108.990 1.00 24.98 C
ATOM 18 C6 G A2037 51.092 141.801 108.910 1.00 27.21 C
ATOM 19 O6 G A2037 50.309 141.682 107.966 1.00 32.90 O
ATOM 20 N1 G A2037 50.877 141.091 110.088 1.00 24.57 N
ATOM 21 C2 G A2037 51.680 141.152 111.202 1.00 24.36 C
ATOM 22 N2 G A2037 51.329 140.381 112.239 1.00 23.40 N
ATOM 23 N3 G A2037 52.756 141.907 111.291 1.00 23.35 N
ATOM 24 C4 G A2037 52.988 142.593 110.155 1.00 24.23 C
ATOM 25 P G A2038 59.037 142.581 108.470 1.00 25.44 P
ATOM 26 OP1 G A2038 60.510 142.518 108.565 1.00 26.46 O
ATOM 27 OP2 G A2038 58.403 142.908 107.180 1.00 25.48 O
ATOM 28 O5' G A2038 58.403 141.236 109.041 1.00 25.43 O
TER

ATOM 1 O3' U B2493 41.275 133.782 108.801 1.00 26.10 O
ATOM 2 P A B2494 41.198 134.621 110.166 1.00 27.01 P
ATOM 3 OP1 A B2494 40.394 133.788 111.106 1.00 27.82 O
ATOM 4 OP2 A B2494 40.785 136.013 109.877 1.00 23.42 O
ATOM 5 O5' A B2494 42.696 134.634 110.700 1.00 27.36 O
ATOM 6 C5' A B2494 43.258 133.467 111.329 1.00 25.69 C
ATOM 7 C4' A B2494 44.579 133.807 111.962 1.00 25.31 C
ATOM 8 O4' A B2494 45.567 134.080 110.935 1.00 24.22 O
ATOM 9 C3' A B2494 44.590 135.057 112.825 1.00 26.05 C
ATOM 10 O3' A B2494 44.096 134.779 114.123 1.00 26.37 O
ATOM 11 C2' A B2494 46.069 135.420 112.841 1.00 25.43 C
ATOM 12 O2' A B2494 46.809 134.643 113.764 1.00 27.92 O
ATOM 13 C1' A B2494 46.481 135.056 111.409 1.00 24.79 C
ATOM 14 N9 A B2494 46.453 136.206 110.507 1.00 25.64 N
ATOM 15 C8 A B2494 45.434 136.657 109.703 1.00 25.55 C
ATOM 16 N7 A B2494 45.726 137.753 109.047 1.00 25.77 N
ATOM 17 C5 A B2494 47.025 138.041 109.440 1.00 25.70 C
ATOM 18 C6 A B2494 47.908 139.088 109.114 1.00 25.09 C
ATOM 19 N6 A B2494 47.612 140.090 108.282 1.00 24.69 N
ATOM 20 N1 A B2494 49.126 139.072 109.683 1.00 25.65 N
ATOM 21 C2 A B2494 49.435 138.079 110.520 1.00 27.16 C
ATOM 22 N3 A B2494 48.698 137.046 110.907 1.00 27.91 N
ATOM 23 C4 A B2494 47.489 137.087 110.326 1.00 26.92 C
ATOM 24 P C B2495 43.121 135.826 114.852 1.00 27.23 P
ATOM 25 OP1 C B2495 42.432 135.034 115.904 1.00 29.11 O
ATOM 26 OP2 C B2495 42.323 136.556 113.848 1.00 25.12 O
ATOM 27 O5' C B2495 44.111 136.850 115.565 1.00 26.91 O
TER

Atoms:
OP1: (56.551,148.634,107.560)
OP2: (54.723,147.140,106.592)
C3': (57.153,143.920,109.652)
C1': (55.148,143.687,110.851)
C5': (57.011,146.445,109.560)
O6: (50.309,141.682,107.966)
O4': (55.480,145.063,110.785)
C8: (53.890,143.924,108.653)
C2: (51.680,141.152,111.202)
C6: (51.092,141.801,108.910)
C5: (52.256,142.604,108.990)
C4: (52.988,142.593,110.155)
P: (55.513,147.596,107.748)
C4': (56.868,145.209,110.394)
C2': (56.404,142.894,110.489)
O2': (57.083,142.518,111.674)
N1: (50.877,141.091,110.088)
N2: (51.329,140.381,112.239)
N3: (52.756,141.907,111.291)
N7: (52.832,143.452,108.053)
N9: (54.053,143.425,109.925)
O5': (56.211,146.321,108.382)
O3': (58.539,143.663,109.534)
OP1: (40.394,133.788,111.106)
OP2: (40.785,136.013,109.877)
C3': (44.590,135.057,112.825)
C1': (46.481,135.056,111.409)
C5': (43.258,133.467,111.329)
O4': (45.567,134.080,110.935)
C8: (45.434,136.657,109.703)
O2': (46.809,134.643,113.764)
C6: (47.908,139.088,109.114)
C5: (47.025,138.041,109.440)
C4: (47.489,137.087,110.326)
P: (41.198,134.621,110.166)
C4': (44.579,133.807,111.962)
C2': (46.069,135.420,112.841)
C2: (49.435,138.079,110.520)
N1: (49.126,139.072,109.683)
N3: (48.698,137.046,110.907)
N6: (47.612,140.090,108.282)
N7: (45.726,137.753,109.047)
N9: (46.453,136.206,110.507)
O5': (42.696,134.634,110.700)
O3': (44.096,134.779,114.123)
Image (generated by PyMOL):
PyMOL image
show in jmol