Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A856:A913
Extra
PDB:
ATOM 1 O3' G A 855 -137.909 -75.315 24.268 1.00 0.01 O
ATOM 2 P G A 856 -139.002 -74.803 23.211 1.00 0.01 P
ATOM 3 OP1 G A 856 -140.240 -74.568 23.976 1.00 0.01 O
ATOM 4 OP2 G A 856 -139.037 -75.760 22.079 1.00 0.01 O
ATOM 5 O5' G A 856 -138.366 -73.423 22.724 1.00 0.01 O
ATOM 6 C5' G A 856 -137.973 -72.433 23.658 1.00 0.01 C
ATOM 7 C4' G A 856 -136.482 -72.162 23.628 1.00 0.01 C
ATOM 8 O4' G A 856 -135.732 -73.370 23.864 1.00 0.01 O
ATOM 9 C3' G A 856 -135.907 -71.659 22.331 1.00 0.01 C
ATOM 10 O3' G A 856 -136.190 -70.321 22.102 1.00 0.01 O
ATOM 11 C2' G A 856 -134.436 -71.923 22.521 1.00 0.01 C
ATOM 12 O2' G A 856 -133.867 -70.953 23.381 1.00 0.01 O
ATOM 13 C1' G A 856 -134.476 -73.259 23.245 1.00 0.01 C
ATOM 14 N9 G A 856 -134.338 -74.371 22.325 1.00 0.01 N
ATOM 15 C8 G A 856 -135.373 -75.068 21.807 1.00 0.01 C
ATOM 16 N7 G A 856 -134.974 -76.021 21.013 1.00 0.01 N
ATOM 17 C5 G A 856 -133.584 -75.950 21.045 1.00 0.01 C
ATOM 18 C6 G A 856 -132.590 -76.739 20.400 1.00 0.01 C
ATOM 19 O6 G A 856 -132.731 -77.707 19.638 1.00 0.01 O
ATOM 20 N1 G A 856 -131.317 -76.293 20.717 1.00 0.01 N
ATOM 21 C2 G A 856 -131.015 -75.242 21.530 1.00 0.01 C
ATOM 22 N2 G A 856 -129.707 -74.967 21.700 1.00 0.01 N
ATOM 23 N3 G A 856 -131.934 -74.522 22.134 1.00 0.01 N
ATOM 24 C4 G A 856 -133.182 -74.921 21.854 1.00 0.01 C
ATOM 25 P G A 857 -137.223 -69.932 20.972 1.00 0.65 P
ATOM 26 OP1 G A 857 -138.222 -69.072 21.595 1.00 0.65 O
ATOM 27 OP2 G A 857 -137.674 -71.166 20.326 1.00 0.65 O
ATOM 28 O5' G A 857 -136.325 -69.091 19.978 1.00 0.65 O
TER
ATOM 1 O3' U B 912 -124.841 -83.017 13.663 1.00 0.01 O
ATOM 2 P A B 913 -124.771 -83.546 15.166 1.00 0.01 P
ATOM 3 OP1 A B 913 -123.744 -84.601 15.205 1.00 0.01 O
ATOM 4 OP2 A B 913 -126.134 -83.888 15.576 1.00 0.01 O
ATOM 5 O5' A B 913 -124.307 -82.272 16.002 1.00 0.01 O
ATOM 6 C5' A B 913 -123.187 -81.495 15.637 1.00 0.01 C
ATOM 7 C4' A B 913 -123.164 -80.225 16.427 1.00 0.01 C
ATOM 8 O4' A B 913 -124.193 -79.363 15.941 1.00 0.01 O
ATOM 9 C3' A B 913 -123.484 -80.372 17.890 1.00 0.01 C
ATOM 10 O3' A B 913 -122.364 -80.772 18.658 1.00 0.01 O
ATOM 11 C2' A B 913 -124.034 -79.000 18.251 1.00 0.01 C
ATOM 12 O2' A B 913 -123.003 -78.063 18.441 1.00 0.01 O
ATOM 13 C1' A B 913 -124.756 -78.624 16.985 1.00 0.01 C
ATOM 14 N9 A B 913 -126.180 -78.931 17.060 1.00 0.01 N
ATOM 15 C8 A B 913 -126.844 -79.855 16.323 1.00 0.01 C
ATOM 16 N7 A B 913 -128.109 -79.924 16.613 1.00 0.01 N
ATOM 17 C5 A B 913 -128.272 -78.979 17.599 1.00 0.01 C
ATOM 18 C6 A B 913 -129.396 -78.600 18.289 1.00 0.01 C
ATOM 19 N6 A B 913 -130.588 -79.155 18.074 1.00 0.01 N
ATOM 20 N1 A B 913 -129.238 -77.638 19.191 1.00 0.01 N
ATOM 21 C2 A B 913 -128.039 -77.090 19.378 1.00 0.01 C
ATOM 22 N3 A B 913 -126.905 -77.359 18.775 1.00 0.01 N
ATOM 23 C4 A B 913 -127.101 -78.343 17.884 1.00 0.01 C
ATOM 24 P C B 914 -122.564 -81.615 19.995 1.00 0.01 P
ATOM 25 OP1 C B 914 -121.243 -81.872 20.528 1.00 0.01 O
ATOM 26 OP2 C B 914 -123.417 -82.750 19.682 1.00 0.01 O
ATOM 27 O5' C B 914 -123.348 -80.598 20.916 1.00 0.01 O
TER
ATOM 2 P G A 856 -139.002 -74.803 23.211 1.00 0.01 P
ATOM 3 OP1 G A 856 -140.240 -74.568 23.976 1.00 0.01 O
ATOM 4 OP2 G A 856 -139.037 -75.760 22.079 1.00 0.01 O
ATOM 5 O5' G A 856 -138.366 -73.423 22.724 1.00 0.01 O
ATOM 6 C5' G A 856 -137.973 -72.433 23.658 1.00 0.01 C
ATOM 7 C4' G A 856 -136.482 -72.162 23.628 1.00 0.01 C
ATOM 8 O4' G A 856 -135.732 -73.370 23.864 1.00 0.01 O
ATOM 9 C3' G A 856 -135.907 -71.659 22.331 1.00 0.01 C
ATOM 10 O3' G A 856 -136.190 -70.321 22.102 1.00 0.01 O
ATOM 11 C2' G A 856 -134.436 -71.923 22.521 1.00 0.01 C
ATOM 12 O2' G A 856 -133.867 -70.953 23.381 1.00 0.01 O
ATOM 13 C1' G A 856 -134.476 -73.259 23.245 1.00 0.01 C
ATOM 14 N9 G A 856 -134.338 -74.371 22.325 1.00 0.01 N
ATOM 15 C8 G A 856 -135.373 -75.068 21.807 1.00 0.01 C
ATOM 16 N7 G A 856 -134.974 -76.021 21.013 1.00 0.01 N
ATOM 17 C5 G A 856 -133.584 -75.950 21.045 1.00 0.01 C
ATOM 18 C6 G A 856 -132.590 -76.739 20.400 1.00 0.01 C
ATOM 19 O6 G A 856 -132.731 -77.707 19.638 1.00 0.01 O
ATOM 20 N1 G A 856 -131.317 -76.293 20.717 1.00 0.01 N
ATOM 21 C2 G A 856 -131.015 -75.242 21.530 1.00 0.01 C
ATOM 22 N2 G A 856 -129.707 -74.967 21.700 1.00 0.01 N
ATOM 23 N3 G A 856 -131.934 -74.522 22.134 1.00 0.01 N
ATOM 24 C4 G A 856 -133.182 -74.921 21.854 1.00 0.01 C
ATOM 25 P G A 857 -137.223 -69.932 20.972 1.00 0.65 P
ATOM 26 OP1 G A 857 -138.222 -69.072 21.595 1.00 0.65 O
ATOM 27 OP2 G A 857 -137.674 -71.166 20.326 1.00 0.65 O
ATOM 28 O5' G A 857 -136.325 -69.091 19.978 1.00 0.65 O
TER
ATOM 1 O3' U B 912 -124.841 -83.017 13.663 1.00 0.01 O
ATOM 2 P A B 913 -124.771 -83.546 15.166 1.00 0.01 P
ATOM 3 OP1 A B 913 -123.744 -84.601 15.205 1.00 0.01 O
ATOM 4 OP2 A B 913 -126.134 -83.888 15.576 1.00 0.01 O
ATOM 5 O5' A B 913 -124.307 -82.272 16.002 1.00 0.01 O
ATOM 6 C5' A B 913 -123.187 -81.495 15.637 1.00 0.01 C
ATOM 7 C4' A B 913 -123.164 -80.225 16.427 1.00 0.01 C
ATOM 8 O4' A B 913 -124.193 -79.363 15.941 1.00 0.01 O
ATOM 9 C3' A B 913 -123.484 -80.372 17.890 1.00 0.01 C
ATOM 10 O3' A B 913 -122.364 -80.772 18.658 1.00 0.01 O
ATOM 11 C2' A B 913 -124.034 -79.000 18.251 1.00 0.01 C
ATOM 12 O2' A B 913 -123.003 -78.063 18.441 1.00 0.01 O
ATOM 13 C1' A B 913 -124.756 -78.624 16.985 1.00 0.01 C
ATOM 14 N9 A B 913 -126.180 -78.931 17.060 1.00 0.01 N
ATOM 15 C8 A B 913 -126.844 -79.855 16.323 1.00 0.01 C
ATOM 16 N7 A B 913 -128.109 -79.924 16.613 1.00 0.01 N
ATOM 17 C5 A B 913 -128.272 -78.979 17.599 1.00 0.01 C
ATOM 18 C6 A B 913 -129.396 -78.600 18.289 1.00 0.01 C
ATOM 19 N6 A B 913 -130.588 -79.155 18.074 1.00 0.01 N
ATOM 20 N1 A B 913 -129.238 -77.638 19.191 1.00 0.01 N
ATOM 21 C2 A B 913 -128.039 -77.090 19.378 1.00 0.01 C
ATOM 22 N3 A B 913 -126.905 -77.359 18.775 1.00 0.01 N
ATOM 23 C4 A B 913 -127.101 -78.343 17.884 1.00 0.01 C
ATOM 24 P C B 914 -122.564 -81.615 19.995 1.00 0.01 P
ATOM 25 OP1 C B 914 -121.243 -81.872 20.528 1.00 0.01 O
ATOM 26 OP2 C B 914 -123.417 -82.750 19.682 1.00 0.01 O
ATOM 27 O5' C B 914 -123.348 -80.598 20.916 1.00 0.01 O
TER
Atoms:
OP1: (-140.240,-74.568,23.976)
OP2: (-139.037,-75.760,22.079)
C3': (-135.907,-71.659,22.331)
C1': (-134.476,-73.259,23.245)
C5': (-137.973,-72.433,23.658)
O6: (-132.731,-77.707,19.638)
O4': (-135.732,-73.370,23.864)
C8: (-135.373,-75.068,21.807)
C2: (-131.015,-75.242,21.530)
C6: (-132.590,-76.739,20.400)
C5: (-133.584,-75.950,21.045)
C4: (-133.182,-74.921,21.854)
P: (-139.002,-74.803,23.211)
C4': (-136.482,-72.162,23.628)
C2': (-134.436,-71.923,22.521)
O2': (-133.867,-70.953,23.381)
N1: (-131.317,-76.293,20.717)
N2: (-129.707,-74.967,21.700)
N3: (-131.934,-74.522,22.134)
N7: (-134.974,-76.021,21.013)
N9: (-134.338,-74.371,22.325)
O5': (-138.366,-73.423,22.724)
O3': (-136.190,-70.321,22.102)
OP2: (-139.037,-75.760,22.079)
C3': (-135.907,-71.659,22.331)
C1': (-134.476,-73.259,23.245)
C5': (-137.973,-72.433,23.658)
O6: (-132.731,-77.707,19.638)
O4': (-135.732,-73.370,23.864)
C8: (-135.373,-75.068,21.807)
C2: (-131.015,-75.242,21.530)
C6: (-132.590,-76.739,20.400)
C5: (-133.584,-75.950,21.045)
C4: (-133.182,-74.921,21.854)
P: (-139.002,-74.803,23.211)
C4': (-136.482,-72.162,23.628)
C2': (-134.436,-71.923,22.521)
O2': (-133.867,-70.953,23.381)
N1: (-131.317,-76.293,20.717)
N2: (-129.707,-74.967,21.700)
N3: (-131.934,-74.522,22.134)
N7: (-134.974,-76.021,21.013)
N9: (-134.338,-74.371,22.325)
O5': (-138.366,-73.423,22.724)
O3': (-136.190,-70.321,22.102)
OP1: (-123.744,-84.601,15.205)
OP2: (-126.134,-83.888,15.576)
C3': (-123.484,-80.372,17.890)
C1': (-124.756,-78.624,16.985)
C5': (-123.187,-81.495,15.637)
O4': (-124.193,-79.363,15.941)
C8: (-126.844,-79.855,16.323)
O2': (-123.003,-78.063,18.441)
C6: (-129.396,-78.600,18.289)
C5: (-128.272,-78.979,17.599)
C4: (-127.101,-78.343,17.884)
P: (-124.771,-83.546,15.166)
C4': (-123.164,-80.225,16.427)
C2': (-124.034,-79.000,18.251)
C2: (-128.039,-77.090,19.378)
N1: (-129.238,-77.638,19.191)
N3: (-126.905,-77.359,18.775)
N6: (-130.588,-79.155,18.074)
N7: (-128.109,-79.924,16.613)
N9: (-126.180,-78.931,17.060)
O5': (-124.307,-82.272,16.002)
O3': (-122.364,-80.772,18.658)
OP2: (-126.134,-83.888,15.576)
C3': (-123.484,-80.372,17.890)
C1': (-124.756,-78.624,16.985)
C5': (-123.187,-81.495,15.637)
O4': (-124.193,-79.363,15.941)
C8: (-126.844,-79.855,16.323)
O2': (-123.003,-78.063,18.441)
C6: (-129.396,-78.600,18.289)
C5: (-128.272,-78.979,17.599)
C4: (-127.101,-78.343,17.884)
P: (-124.771,-83.546,15.166)
C4': (-123.164,-80.225,16.427)
C2': (-124.034,-79.000,18.251)
C2: (-128.039,-77.090,19.378)
N1: (-129.238,-77.638,19.191)
N3: (-126.905,-77.359,18.775)
N6: (-130.588,-79.155,18.074)
N7: (-128.109,-79.924,16.613)
N9: (-126.180,-78.931,17.060)
O5': (-124.307,-82.272,16.002)
O3': (-122.364,-80.772,18.658)
Image (generated by PyMOL):