ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A2563:A2505

Extra

PDB:
ATOM 1 O3' G A2562 79.310 -71.967 44.604 1.00 62.38 O
ATOM 2 P G A2563 80.603 -71.408 45.362 1.00 64.04 P
ATOM 3 OP1 G A2563 81.237 -72.568 46.014 1.00 69.42 O
ATOM 4 OP2 G A2563 80.179 -70.254 46.193 1.00 61.66 O
ATOM 5 O5' G A2563 81.505 -70.909 44.164 1.00 57.91 O
ATOM 6 C5' G A2563 81.724 -71.761 43.050 1.00 62.53 C
ATOM 7 C4' G A2563 82.553 -71.084 42.005 1.00 63.57 C
ATOM 8 O4' G A2563 81.770 -70.003 41.443 1.00 58.53 O
ATOM 9 C3' G A2563 83.839 -70.458 42.533 1.00 63.88 C
ATOM 10 O3' G A2563 84.860 -70.485 41.522 1.00 74.15 O
ATOM 11 C2' G A2563 83.424 -69.023 42.802 1.00 55.21 C
ATOM 12 O2' G A2563 84.485 -68.097 42.735 1.00 66.03 O
ATOM 13 C1' G A2563 82.399 -68.772 41.695 1.00 59.06 C
ATOM 14 N9 G A2563 81.377 -67.809 42.073 1.00 54.28 N
ATOM 15 C8 G A2563 80.839 -67.741 43.328 1.00 61.81 C
ATOM 16 N7 G A2563 79.985 -66.762 43.431 1.00 60.63 N
ATOM 17 C5 G A2563 79.986 -66.160 42.185 1.00 45.67 C
ATOM 18 C6 G A2563 79.255 -65.058 41.726 1.00 49.42 C
ATOM 19 O6 G A2563 78.443 -64.385 42.347 1.00 67.14 O
ATOM 20 N1 G A2563 79.523 -64.752 40.418 1.00 50.23 N
ATOM 21 C2 G A2563 80.389 -65.451 39.653 1.00 55.34 C
ATOM 22 N2 G A2563 80.494 -64.996 38.409 1.00 56.23 N
ATOM 23 N3 G A2563 81.086 -66.497 40.064 1.00 58.56 N
ATOM 24 C4 G A2563 80.839 -66.790 41.339 1.00 47.49 C
ATOM 25 P A A2564 86.245 -71.273 41.780 1.00 90.28 P
ATOM 26 OP1 A A2564 87.348 -70.368 41.337 1.00 74.40 O
ATOM 27 OP2 A A2564 86.116 -72.626 41.151 1.00 75.76 O
ATOM 28 O5' A A2564 86.275 -71.423 43.362 1.00 89.44 O
TER

ATOM 1 O3' G B2504 75.981 -53.655 39.922 1.00 67.13 O
ATOM 2 P A B2505 74.861 -54.463 39.063 1.00 50.80 P
ATOM 3 OP1 A B2505 73.644 -53.610 38.972 1.00 57.50 O
ATOM 4 OP2 A B2505 74.727 -55.807 39.661 1.00 54.81 O
ATOM 5 O5' A B2505 75.557 -54.560 37.647 1.00 55.50 O
ATOM 6 C5' A B2505 75.506 -55.755 36.907 1.00 59.92 C
ATOM 7 C4' A B2505 76.853 -56.152 36.372 1.00 52.91 C
ATOM 8 O4' A B2505 77.828 -56.210 37.454 1.00 60.58 O
ATOM 9 C3' A B2505 76.895 -57.534 35.779 1.00 49.07 C
ATOM 10 O3' A B2505 76.386 -57.574 34.473 1.00 55.51 O
ATOM 11 C2' A B2505 78.353 -57.899 35.901 1.00 53.27 C
ATOM 12 O2' A B2505 79.118 -57.173 34.962 1.00 61.95 O
ATOM 13 C1' A B2505 78.656 -57.341 37.284 1.00 57.27 C
ATOM 14 N9 A B2505 78.348 -58.320 38.358 1.00 47.29 N
ATOM 15 C8 A B2505 77.491 -58.117 39.391 1.00 52.40 C
ATOM 16 N7 A B2505 77.392 -59.127 40.203 1.00 54.23 N
ATOM 17 C5 A B2505 78.244 -60.063 39.674 1.00 42.21 C
ATOM 18 C6 A B2505 78.566 -61.345 40.103 1.00 46.10 C
ATOM 19 N6 A B2505 78.049 -61.888 41.196 1.00 40.61 N
ATOM 20 N1 A B2505 79.442 -62.054 39.372 1.00 51.87 N
ATOM 21 C2 A B2505 79.955 -61.474 38.284 1.00 49.40 C
ATOM 22 N3 A B2505 79.726 -60.266 37.790 1.00 44.66 N
ATOM 23 C4 A B2505 78.844 -59.595 38.541 1.00 41.96 C
ATOM 24 P C B2506 74.900 -58.128 34.223 1.00 63.21 P
ATOM 25 OP1 C B2506 74.406 -57.494 32.986 1.00 60.57 O
ATOM 26 OP2 C B2506 74.124 -57.938 35.466 1.00 48.06 O
ATOM 27 O5' C B2506 75.165 -59.671 33.982 1.00 47.49 O
TER

Atoms:
OP1: (81.237,-72.568,46.014)
OP2: (80.179,-70.254,46.193)
C3': (83.839,-70.458,42.533)
C1': (82.399,-68.772,41.695)
C5': (81.724,-71.761,43.050)
O6: (78.443,-64.385,42.347)
O4': (81.770,-70.003,41.443)
C8: (80.839,-67.741,43.328)
C2: (80.389,-65.451,39.653)
C6: (79.255,-65.058,41.726)
C5: (79.986,-66.160,42.185)
C4: (80.839,-66.790,41.339)
P: (80.603,-71.408,45.362)
C4': (82.553,-71.084,42.005)
C2': (83.424,-69.023,42.802)
O2': (84.485,-68.097,42.735)
N1: (79.523,-64.752,40.418)
N2: (80.494,-64.996,38.409)
N3: (81.086,-66.497,40.064)
N7: (79.985,-66.762,43.431)
N9: (81.377,-67.809,42.073)
O5': (81.505,-70.909,44.164)
O3': (84.860,-70.485,41.522)
OP1: (73.644,-53.610,38.972)
OP2: (74.727,-55.807,39.661)
C3': (76.895,-57.534,35.779)
C1': (78.656,-57.341,37.284)
C5': (75.506,-55.755,36.907)
O4': (77.828,-56.210,37.454)
C8: (77.491,-58.117,39.391)
O2': (79.118,-57.173,34.962)
C6: (78.566,-61.345,40.103)
C5: (78.244,-60.063,39.674)
C4: (78.844,-59.595,38.541)
P: (74.861,-54.463,39.063)
C4': (76.853,-56.152,36.372)
C2': (78.353,-57.899,35.901)
C2: (79.955,-61.474,38.284)
N1: (79.442,-62.054,39.372)
N3: (79.726,-60.266,37.790)
N6: (78.049,-61.888,41.196)
N7: (77.392,-59.127,40.203)
N9: (78.348,-58.320,38.358)
O5': (75.557,-54.560,37.647)
O3': (76.386,-57.574,34.473)
Image (generated by PyMOL):
PyMOL image
show in jmol