Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1HQ1:B20:B31
Extra
PDB:
ATOM 1 O3' G A 19 20.508 -1.407 7.570 1.00 35.02 O
ATOM 2 P G A 20 19.775 -2.668 6.875 1.00 35.08 P
ATOM 3 OP1 G A 20 18.499 -2.134 6.334 1.00 38.95 O
ATOM 4 OP2 G A 20 19.712 -3.838 7.783 1.00 36.62 O
ATOM 5 O5' G A 20 20.729 -3.061 5.677 1.00 34.29 O
ATOM 6 C5' G A 20 20.900 -2.218 4.525 1.00 30.02 C
ATOM 7 C4' G A 20 22.198 -2.600 3.834 1.00 27.77 C
ATOM 8 O4' G A 20 23.357 -2.419 4.691 1.00 27.22 O
ATOM 9 C3' G A 20 22.325 -4.042 3.371 1.00 27.30 C
ATOM 10 O3' G A 20 21.618 -4.123 2.129 1.00 30.73 O
ATOM 11 C2' G A 20 23.832 -4.113 3.133 1.00 27.24 C
ATOM 12 O2' G A 20 24.183 -3.326 1.995 1.00 29.47 O
ATOM 13 C1' G A 20 24.357 -3.384 4.414 1.00 26.10 C
ATOM 14 N9 G A 20 24.363 -4.377 5.496 1.00 26.10 N
ATOM 15 C8 G A 20 23.433 -4.559 6.503 1.00 26.89 C
ATOM 16 N7 G A 20 23.750 -5.577 7.303 1.00 28.44 N
ATOM 17 C5 G A 20 24.944 -6.067 6.775 1.00 28.47 C
ATOM 18 C6 G A 20 25.755 -7.154 7.190 1.00 23.54 C
ATOM 19 O6 G A 20 25.563 -7.894 8.167 1.00 27.50 O
ATOM 20 N1 G A 20 26.886 -7.329 6.395 1.00 25.13 N
ATOM 21 C2 G A 20 27.176 -6.544 5.298 1.00 26.16 C
ATOM 22 N2 G A 20 28.317 -6.834 4.613 1.00 25.48 N
ATOM 23 N3 G A 20 26.418 -5.543 4.928 1.00 27.94 N
ATOM 24 C4 G A 20 25.321 -5.351 5.665 1.00 26.44 C
ATOM 25 P U A 21 21.048 -5.547 1.695 1.00 33.80 P
ATOM 26 OP1 U A 21 20.410 -5.428 0.342 1.00 36.03 O
ATOM 27 OP2 U A 21 20.207 -6.117 2.765 1.00 35.22 O
ATOM 28 O5' U A 21 22.308 -6.494 1.511 1.00 32.50 O
TER
ATOM 1 O3' A B 30 30.314 -17.994 9.837 1.00 34.53 O
ATOM 2 P A B 31 31.273 -16.988 10.642 1.00 30.75 P
ATOM 3 OP1 A B 31 32.353 -17.818 11.192 1.00 35.56 O
ATOM 4 OP2 A B 31 30.431 -16.218 11.593 1.00 33.16 O
ATOM 5 O5' A B 31 31.815 -16.008 9.511 1.00 30.38 O
ATOM 6 C5' A B 31 32.629 -16.500 8.421 1.00 29.41 C
ATOM 7 C4' A B 31 32.546 -15.524 7.258 1.00 28.09 C
ATOM 8 O4' A B 31 31.182 -15.328 6.777 1.00 28.52 O
ATOM 9 C3' A B 31 33.010 -14.100 7.609 1.00 29.63 C
ATOM 10 O3' A B 31 34.415 -14.006 7.638 1.00 29.83 O
ATOM 11 C2' A B 31 32.421 -13.299 6.450 1.00 29.15 C
ATOM 12 O2' A B 31 33.171 -13.462 5.237 1.00 31.01 O
ATOM 13 C1' A B 31 31.045 -13.962 6.331 1.00 29.03 C
ATOM 14 N9 A B 31 30.100 -13.285 7.222 1.00 27.52 N
ATOM 15 C8 A B 31 29.669 -13.649 8.468 1.00 27.02 C
ATOM 16 N7 A B 31 28.800 -12.793 9.014 1.00 27.32 N
ATOM 17 C5 A B 31 28.666 -11.805 8.038 1.00 28.10 C
ATOM 18 C6 A B 31 27.919 -10.616 7.949 1.00 27.74 C
ATOM 19 N6 A B 31 27.090 -10.124 8.856 1.00 27.61 N
ATOM 20 N1 A B 31 28.066 -9.872 6.811 1.00 25.85 N
ATOM 21 C2 A B 31 28.871 -10.280 5.847 1.00 25.94 C
ATOM 22 N3 A B 31 29.615 -11.387 5.834 1.00 28.07 N
ATOM 23 C4 A B 31 29.475 -12.099 6.955 1.00 26.65 C
ATOM 24 P G B 32 35.139 -13.108 8.771 1.00 30.59 P
ATOM 25 OP1 G B 32 36.616 -13.230 8.632 1.00 34.17 O
ATOM 26 OP2 G B 32 34.550 -13.355 10.096 1.00 32.29 O
ATOM 27 O5' G B 32 34.674 -11.625 8.375 1.00 28.05 O
TER
ATOM 2 P G A 20 19.775 -2.668 6.875 1.00 35.08 P
ATOM 3 OP1 G A 20 18.499 -2.134 6.334 1.00 38.95 O
ATOM 4 OP2 G A 20 19.712 -3.838 7.783 1.00 36.62 O
ATOM 5 O5' G A 20 20.729 -3.061 5.677 1.00 34.29 O
ATOM 6 C5' G A 20 20.900 -2.218 4.525 1.00 30.02 C
ATOM 7 C4' G A 20 22.198 -2.600 3.834 1.00 27.77 C
ATOM 8 O4' G A 20 23.357 -2.419 4.691 1.00 27.22 O
ATOM 9 C3' G A 20 22.325 -4.042 3.371 1.00 27.30 C
ATOM 10 O3' G A 20 21.618 -4.123 2.129 1.00 30.73 O
ATOM 11 C2' G A 20 23.832 -4.113 3.133 1.00 27.24 C
ATOM 12 O2' G A 20 24.183 -3.326 1.995 1.00 29.47 O
ATOM 13 C1' G A 20 24.357 -3.384 4.414 1.00 26.10 C
ATOM 14 N9 G A 20 24.363 -4.377 5.496 1.00 26.10 N
ATOM 15 C8 G A 20 23.433 -4.559 6.503 1.00 26.89 C
ATOM 16 N7 G A 20 23.750 -5.577 7.303 1.00 28.44 N
ATOM 17 C5 G A 20 24.944 -6.067 6.775 1.00 28.47 C
ATOM 18 C6 G A 20 25.755 -7.154 7.190 1.00 23.54 C
ATOM 19 O6 G A 20 25.563 -7.894 8.167 1.00 27.50 O
ATOM 20 N1 G A 20 26.886 -7.329 6.395 1.00 25.13 N
ATOM 21 C2 G A 20 27.176 -6.544 5.298 1.00 26.16 C
ATOM 22 N2 G A 20 28.317 -6.834 4.613 1.00 25.48 N
ATOM 23 N3 G A 20 26.418 -5.543 4.928 1.00 27.94 N
ATOM 24 C4 G A 20 25.321 -5.351 5.665 1.00 26.44 C
ATOM 25 P U A 21 21.048 -5.547 1.695 1.00 33.80 P
ATOM 26 OP1 U A 21 20.410 -5.428 0.342 1.00 36.03 O
ATOM 27 OP2 U A 21 20.207 -6.117 2.765 1.00 35.22 O
ATOM 28 O5' U A 21 22.308 -6.494 1.511 1.00 32.50 O
TER
ATOM 1 O3' A B 30 30.314 -17.994 9.837 1.00 34.53 O
ATOM 2 P A B 31 31.273 -16.988 10.642 1.00 30.75 P
ATOM 3 OP1 A B 31 32.353 -17.818 11.192 1.00 35.56 O
ATOM 4 OP2 A B 31 30.431 -16.218 11.593 1.00 33.16 O
ATOM 5 O5' A B 31 31.815 -16.008 9.511 1.00 30.38 O
ATOM 6 C5' A B 31 32.629 -16.500 8.421 1.00 29.41 C
ATOM 7 C4' A B 31 32.546 -15.524 7.258 1.00 28.09 C
ATOM 8 O4' A B 31 31.182 -15.328 6.777 1.00 28.52 O
ATOM 9 C3' A B 31 33.010 -14.100 7.609 1.00 29.63 C
ATOM 10 O3' A B 31 34.415 -14.006 7.638 1.00 29.83 O
ATOM 11 C2' A B 31 32.421 -13.299 6.450 1.00 29.15 C
ATOM 12 O2' A B 31 33.171 -13.462 5.237 1.00 31.01 O
ATOM 13 C1' A B 31 31.045 -13.962 6.331 1.00 29.03 C
ATOM 14 N9 A B 31 30.100 -13.285 7.222 1.00 27.52 N
ATOM 15 C8 A B 31 29.669 -13.649 8.468 1.00 27.02 C
ATOM 16 N7 A B 31 28.800 -12.793 9.014 1.00 27.32 N
ATOM 17 C5 A B 31 28.666 -11.805 8.038 1.00 28.10 C
ATOM 18 C6 A B 31 27.919 -10.616 7.949 1.00 27.74 C
ATOM 19 N6 A B 31 27.090 -10.124 8.856 1.00 27.61 N
ATOM 20 N1 A B 31 28.066 -9.872 6.811 1.00 25.85 N
ATOM 21 C2 A B 31 28.871 -10.280 5.847 1.00 25.94 C
ATOM 22 N3 A B 31 29.615 -11.387 5.834 1.00 28.07 N
ATOM 23 C4 A B 31 29.475 -12.099 6.955 1.00 26.65 C
ATOM 24 P G B 32 35.139 -13.108 8.771 1.00 30.59 P
ATOM 25 OP1 G B 32 36.616 -13.230 8.632 1.00 34.17 O
ATOM 26 OP2 G B 32 34.550 -13.355 10.096 1.00 32.29 O
ATOM 27 O5' G B 32 34.674 -11.625 8.375 1.00 28.05 O
TER
Atoms:
OP1: (18.499,-2.134,6.334)
OP2: (19.712,-3.838,7.783)
C3': (22.325,-4.042,3.371)
C1': (24.357,-3.384,4.414)
C5': (20.900,-2.218,4.525)
O6: (25.563,-7.894,8.167)
O4': (23.357,-2.419,4.691)
C8: (23.433,-4.559,6.503)
C2: (27.176,-6.544,5.298)
C6: (25.755,-7.154,7.190)
C5: (24.944,-6.067,6.775)
C4: (25.321,-5.351,5.665)
P: (19.775,-2.668,6.875)
C4': (22.198,-2.600,3.834)
C2': (23.832,-4.113,3.133)
O2': (24.183,-3.326,1.995)
N1: (26.886,-7.329,6.395)
N2: (28.317,-6.834,4.613)
N3: (26.418,-5.543,4.928)
N7: (23.750,-5.577,7.303)
N9: (24.363,-4.377,5.496)
O5': (20.729,-3.061,5.677)
O3': (21.618,-4.123,2.129)
OP2: (19.712,-3.838,7.783)
C3': (22.325,-4.042,3.371)
C1': (24.357,-3.384,4.414)
C5': (20.900,-2.218,4.525)
O6: (25.563,-7.894,8.167)
O4': (23.357,-2.419,4.691)
C8: (23.433,-4.559,6.503)
C2: (27.176,-6.544,5.298)
C6: (25.755,-7.154,7.190)
C5: (24.944,-6.067,6.775)
C4: (25.321,-5.351,5.665)
P: (19.775,-2.668,6.875)
C4': (22.198,-2.600,3.834)
C2': (23.832,-4.113,3.133)
O2': (24.183,-3.326,1.995)
N1: (26.886,-7.329,6.395)
N2: (28.317,-6.834,4.613)
N3: (26.418,-5.543,4.928)
N7: (23.750,-5.577,7.303)
N9: (24.363,-4.377,5.496)
O5': (20.729,-3.061,5.677)
O3': (21.618,-4.123,2.129)
OP1: (32.353,-17.818,11.192)
OP2: (30.431,-16.218,11.593)
C3': (33.010,-14.100,7.609)
C1': (31.045,-13.962,6.331)
C5': (32.629,-16.500,8.421)
O4': (31.182,-15.328,6.777)
C8: (29.669,-13.649,8.468)
O2': (33.171,-13.462,5.237)
C6: (27.919,-10.616,7.949)
C5: (28.666,-11.805,8.038)
C4: (29.475,-12.099,6.955)
P: (31.273,-16.988,10.642)
C4': (32.546,-15.524,7.258)
C2': (32.421,-13.299,6.450)
C2: (28.871,-10.280,5.847)
N1: (28.066,-9.872,6.811)
N3: (29.615,-11.387,5.834)
N6: (27.090,-10.124,8.856)
N7: (28.800,-12.793,9.014)
N9: (30.100,-13.285,7.222)
O5': (31.815,-16.008,9.511)
O3': (34.415,-14.006,7.638)
OP2: (30.431,-16.218,11.593)
C3': (33.010,-14.100,7.609)
C1': (31.045,-13.962,6.331)
C5': (32.629,-16.500,8.421)
O4': (31.182,-15.328,6.777)
C8: (29.669,-13.649,8.468)
O2': (33.171,-13.462,5.237)
C6: (27.919,-10.616,7.949)
C5: (28.666,-11.805,8.038)
C4: (29.475,-12.099,6.955)
P: (31.273,-16.988,10.642)
C4': (32.546,-15.524,7.258)
C2': (32.421,-13.299,6.450)
C2: (28.871,-10.280,5.847)
N1: (28.066,-9.872,6.811)
N3: (29.615,-11.387,5.834)
N6: (27.090,-10.124,8.856)
N7: (28.800,-12.793,9.014)
N9: (30.100,-13.285,7.222)
O5': (31.815,-16.008,9.511)
O3': (34.415,-14.006,7.638)
Image (generated by PyMOL):