ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIY:A140:A161

Extra

PDB:
ATOM 1 O3' U A 139 42.912 18.233 22.164 1.00 27.32 O
ATOM 2 P G A 140 43.872 16.978 21.889 1.00 26.66 P
ATOM 3 OP1 G A 140 44.663 16.752 23.123 1.00 26.55 O
ATOM 4 OP2 G A 140 44.563 17.123 20.588 1.00 26.59 O
ATOM 5 O5' G A 140 42.797 15.814 21.727 1.00 26.32 O
ATOM 6 C5' G A 140 41.875 15.582 22.779 1.00 25.22 C
ATOM 7 C4' G A 140 40.572 15.053 22.227 1.00 24.69 C
ATOM 8 O4' G A 140 39.944 16.021 21.348 1.00 24.01 O
ATOM 9 C3' G A 140 40.697 13.828 21.338 1.00 23.95 C
ATOM 10 O3' G A 140 40.980 12.674 22.110 1.00 23.50 O
ATOM 11 C2' G A 140 39.296 13.825 20.742 1.00 24.24 C
ATOM 12 O2' G A 140 38.311 13.363 21.646 1.00 24.72 O
ATOM 13 C1' G A 140 39.112 15.316 20.442 1.00 24.12 C
ATOM 14 N9 G A 140 39.513 15.637 19.075 1.00 23.66 N
ATOM 15 C8 G A 140 40.689 16.220 18.694 1.00 23.69 C
ATOM 16 N7 G A 140 40.794 16.378 17.408 1.00 24.17 N
ATOM 17 C5 G A 140 39.616 15.863 16.899 1.00 23.98 C
ATOM 18 C6 G A 140 39.180 15.761 15.555 1.00 24.13 C
ATOM 19 O6 G A 140 39.769 16.119 14.530 1.00 24.51 O
ATOM 20 N1 G A 140 37.925 15.173 15.453 1.00 24.31 N
ATOM 21 C2 G A 140 37.185 14.732 16.527 1.00 24.56 C
ATOM 22 N2 G A 140 35.998 14.188 16.221 1.00 24.17 N
ATOM 23 N3 G A 140 37.585 14.819 17.800 1.00 24.37 N
ATOM 24 C4 G A 140 38.812 15.395 17.913 1.00 23.81 C
ATOM 25 P U A 141 41.943 11.526 21.544 1.00 22.92 P
ATOM 26 OP1 U A 141 42.224 10.578 22.649 1.00 22.18 O
ATOM 27 OP2 U A 141 43.041 12.174 20.804 1.00 23.57 O
ATOM 28 O5' U A 141 41.069 10.820 20.416 1.00 22.71 O
TER

ATOM 1 O3' G B 160 35.463 13.521 4.626 1.00 26.99 O
ATOM 2 P A B 161 34.326 14.598 4.976 1.00 28.28 P
ATOM 3 OP1 A B 161 33.424 14.665 3.794 1.00 28.12 O
ATOM 4 OP2 A B 161 34.980 15.830 5.487 1.00 27.56 O
ATOM 5 O5' A B 161 33.543 13.933 6.206 1.00 27.49 O
ATOM 6 C5' A B 161 32.871 12.680 6.071 1.00 26.98 C
ATOM 7 C4' A B 161 32.745 11.983 7.419 1.00 26.41 C
ATOM 8 O4' A B 161 33.936 12.194 8.225 1.00 25.93 O
ATOM 9 C3' A B 161 31.588 12.456 8.292 1.00 26.22 C
ATOM 10 O3' A B 161 31.143 11.360 9.068 1.00 26.56 O
ATOM 11 C2' A B 161 32.258 13.538 9.135 1.00 25.86 C
ATOM 12 O2' A B 161 31.587 13.875 10.330 1.00 25.43 O
ATOM 13 C1' A B 161 33.579 12.848 9.429 1.00 25.50 C
ATOM 14 N9 A B 161 34.628 13.784 9.811 1.00 25.86 N
ATOM 15 C8 A B 161 35.127 14.835 9.084 1.00 26.15 C
ATOM 16 N7 A B 161 36.082 15.498 9.701 1.00 26.26 N
ATOM 17 C5 A B 161 36.210 14.837 10.917 1.00 25.59 C
ATOM 18 C6 A B 161 37.041 15.039 12.040 1.00 24.89 C
ATOM 19 N6 A B 161 37.955 16.007 12.135 1.00 24.10 N
ATOM 20 N1 A B 161 36.902 14.187 13.078 1.00 25.64 N
ATOM 21 C2 A B 161 35.997 13.200 13.012 1.00 25.00 C
ATOM 22 N3 A B 161 35.163 12.915 12.017 1.00 24.93 N
ATOM 23 C4 A B 161 35.320 13.777 10.997 1.00 25.40 C
ATOM 24 P G B 162 29.635 10.829 9.003 1.00 26.49 P
ATOM 25 OP1 G B 162 29.674 9.369 8.742 1.00 25.80 O
ATOM 26 OP2 G B 162 28.839 11.732 8.141 1.00 26.22 O
ATOM 27 O5' G B 162 29.177 11.038 10.519 1.00 26.31 O
TER

Atoms:
OP1: (44.663,16.752,23.123)
OP2: (44.563,17.123,20.588)
C3': (40.697,13.828,21.338)
C1': (39.112,15.316,20.442)
C5': (41.875,15.582,22.779)
O6: (39.769,16.119,14.530)
O4': (39.944,16.021,21.348)
C8: (40.689,16.220,18.694)
C2: (37.185,14.732,16.527)
C6: (39.180,15.761,15.555)
C5: (39.616,15.863,16.899)
C4: (38.812,15.395,17.913)
P: (43.872,16.978,21.889)
C4': (40.572,15.053,22.227)
C2': (39.296,13.825,20.742)
O2': (38.311,13.363,21.646)
N1: (37.925,15.173,15.453)
N2: (35.998,14.188,16.221)
N3: (37.585,14.819,17.800)
N7: (40.794,16.378,17.408)
N9: (39.513,15.637,19.075)
O5': (42.797,15.814,21.727)
O3': (40.980,12.674,22.110)
OP1: (33.424,14.665,3.794)
OP2: (34.980,15.830,5.487)
C3': (31.588,12.456,8.292)
C1': (33.579,12.848,9.429)
C5': (32.871,12.680,6.071)
O4': (33.936,12.194,8.225)
C8: (35.127,14.835,9.084)
O2': (31.587,13.875,10.330)
C6: (37.041,15.039,12.040)
C5: (36.210,14.837,10.917)
C4: (35.320,13.777,10.997)
P: (34.326,14.598,4.976)
C4': (32.745,11.983,7.419)
C2': (32.258,13.538,9.135)
C2: (35.997,13.200,13.012)
N1: (36.902,14.187,13.078)
N3: (35.163,12.915,12.017)
N6: (37.955,16.007,12.135)
N7: (36.082,15.498,9.701)
N9: (34.628,13.784,9.811)
O5': (33.543,13.933,6.206)
O3': (31.143,11.360,9.068)
Image (generated by PyMOL):
PyMOL image
show in jmol