Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DH3:H16:H3
Extra
PDB:
ATOM 1 O3' A A 15 3.480 -10.217 -11.512 1.00 32.13 O
ATOM 2 P G A 16 3.998 -10.671 -12.989 1.00 32.49 P
ATOM 3 OP1 G A 16 3.275 -9.965 -14.065 1.00 30.96 O
ATOM 4 OP2 G A 16 4.144 -12.147 -13.076 1.00 28.96 O
ATOM 5 O5' G A 16 5.386 -9.907 -12.954 1.00 32.28 O
ATOM 6 C5' G A 16 5.273 -8.479 -13.135 1.00 32.42 C
ATOM 7 C4' G A 16 6.629 -7.841 -12.958 1.00 32.92 C
ATOM 8 O4' G A 16 7.163 -8.475 -11.764 1.00 33.79 O
ATOM 9 C3' G A 16 7.639 -8.118 -14.095 1.00 33.22 C
ATOM 10 O3' G A 16 8.432 -6.945 -14.466 1.00 34.13 O
ATOM 11 C2' G A 16 8.445 -9.303 -13.533 1.00 32.85 C
ATOM 12 O2' G A 16 9.749 -9.415 -14.051 1.00 31.66 O
ATOM 13 C1' G A 16 8.449 -9.007 -12.035 1.00 33.51 C
ATOM 14 N9 G A 16 8.653 -10.212 -11.242 1.00 34.29 N
ATOM 15 C8 G A 16 7.737 -11.223 -11.129 1.00 34.44 C
ATOM 16 N7 G A 16 8.163 -12.192 -10.362 1.00 35.40 N
ATOM 17 C5 G A 16 9.438 -11.806 -9.966 1.00 34.16 C
ATOM 18 C6 G A 16 10.348 -12.471 -9.142 1.00 33.17 C
ATOM 19 O6 G A 16 10.151 -13.558 -8.621 1.00 35.41 O
ATOM 20 N1 G A 16 11.532 -11.785 -8.934 1.00 32.24 N
ATOM 21 C2 G A 16 11.799 -10.561 -9.467 1.00 33.04 C
ATOM 22 N2 G A 16 12.991 -10.031 -9.165 1.00 32.44 N
ATOM 23 N3 G A 16 10.948 -9.901 -10.255 1.00 34.78 N
ATOM 24 C4 G A 16 9.772 -10.583 -10.478 1.00 34.83 C
TER
ATOM 1 O3' A B 2 17.727 -19.301 -2.777 1.00 37.93 O
ATOM 2 P A B 3 17.212 -17.953 -2.098 1.00 38.56 P
ATOM 3 OP1 A B 3 17.885 -17.742 -0.791 1.00 39.05 O
ATOM 4 OP2 A B 3 15.735 -17.917 -2.154 1.00 38.03 O
ATOM 5 O5' A B 3 17.807 -16.856 -3.108 1.00 37.30 O
ATOM 6 C5' A B 3 19.186 -16.847 -3.484 1.00 34.55 C
ATOM 7 C4' A B 3 19.415 -15.729 -4.480 1.00 34.21 C
ATOM 8 O4' A B 3 18.897 -16.099 -5.803 1.00 34.38 O
ATOM 9 C3' A B 3 18.712 -14.432 -4.108 1.00 34.06 C
ATOM 10 O3' A B 3 19.521 -13.672 -3.267 1.00 34.07 O
ATOM 11 C2' A B 3 18.581 -13.767 -5.462 1.00 35.02 C
ATOM 12 O2' A B 3 19.798 -13.160 -5.862 1.00 35.85 O
ATOM 13 C1' A B 3 18.214 -14.972 -6.340 1.00 34.71 C
ATOM 14 N9 A B 3 16.755 -15.194 -6.364 1.00 34.36 N
ATOM 15 C8 A B 3 16.039 -16.164 -5.695 1.00 34.21 C
ATOM 16 N7 A B 3 14.741 -16.118 -5.909 1.00 33.91 N
ATOM 17 C5 A B 3 14.599 -15.051 -6.790 1.00 33.02 C
ATOM 18 C6 A B 3 13.466 -14.486 -7.403 1.00 32.28 C
ATOM 19 N6 A B 3 12.251 -14.962 -7.167 1.00 31.70 N
ATOM 20 N1 A B 3 13.617 -13.424 -8.231 1.00 32.78 N
ATOM 21 C2 A B 3 14.865 -12.960 -8.410 1.00 33.45 C
ATOM 22 N3 A B 3 16.018 -13.408 -7.882 1.00 33.55 N
ATOM 23 C4 A B 3 15.818 -14.467 -7.074 1.00 33.18 C
ATOM 24 P C B 4 18.953 -12.895 -1.970 1.00 36.57 P
ATOM 25 OP1 C B 4 20.128 -12.247 -1.299 1.00 34.46 O
ATOM 26 OP2 C B 4 18.073 -13.836 -1.214 1.00 35.81 O
ATOM 27 O5' C B 4 18.060 -11.741 -2.625 1.00 34.57 O
TER
ATOM 2 P G A 16 3.998 -10.671 -12.989 1.00 32.49 P
ATOM 3 OP1 G A 16 3.275 -9.965 -14.065 1.00 30.96 O
ATOM 4 OP2 G A 16 4.144 -12.147 -13.076 1.00 28.96 O
ATOM 5 O5' G A 16 5.386 -9.907 -12.954 1.00 32.28 O
ATOM 6 C5' G A 16 5.273 -8.479 -13.135 1.00 32.42 C
ATOM 7 C4' G A 16 6.629 -7.841 -12.958 1.00 32.92 C
ATOM 8 O4' G A 16 7.163 -8.475 -11.764 1.00 33.79 O
ATOM 9 C3' G A 16 7.639 -8.118 -14.095 1.00 33.22 C
ATOM 10 O3' G A 16 8.432 -6.945 -14.466 1.00 34.13 O
ATOM 11 C2' G A 16 8.445 -9.303 -13.533 1.00 32.85 C
ATOM 12 O2' G A 16 9.749 -9.415 -14.051 1.00 31.66 O
ATOM 13 C1' G A 16 8.449 -9.007 -12.035 1.00 33.51 C
ATOM 14 N9 G A 16 8.653 -10.212 -11.242 1.00 34.29 N
ATOM 15 C8 G A 16 7.737 -11.223 -11.129 1.00 34.44 C
ATOM 16 N7 G A 16 8.163 -12.192 -10.362 1.00 35.40 N
ATOM 17 C5 G A 16 9.438 -11.806 -9.966 1.00 34.16 C
ATOM 18 C6 G A 16 10.348 -12.471 -9.142 1.00 33.17 C
ATOM 19 O6 G A 16 10.151 -13.558 -8.621 1.00 35.41 O
ATOM 20 N1 G A 16 11.532 -11.785 -8.934 1.00 32.24 N
ATOM 21 C2 G A 16 11.799 -10.561 -9.467 1.00 33.04 C
ATOM 22 N2 G A 16 12.991 -10.031 -9.165 1.00 32.44 N
ATOM 23 N3 G A 16 10.948 -9.901 -10.255 1.00 34.78 N
ATOM 24 C4 G A 16 9.772 -10.583 -10.478 1.00 34.83 C
TER
ATOM 1 O3' A B 2 17.727 -19.301 -2.777 1.00 37.93 O
ATOM 2 P A B 3 17.212 -17.953 -2.098 1.00 38.56 P
ATOM 3 OP1 A B 3 17.885 -17.742 -0.791 1.00 39.05 O
ATOM 4 OP2 A B 3 15.735 -17.917 -2.154 1.00 38.03 O
ATOM 5 O5' A B 3 17.807 -16.856 -3.108 1.00 37.30 O
ATOM 6 C5' A B 3 19.186 -16.847 -3.484 1.00 34.55 C
ATOM 7 C4' A B 3 19.415 -15.729 -4.480 1.00 34.21 C
ATOM 8 O4' A B 3 18.897 -16.099 -5.803 1.00 34.38 O
ATOM 9 C3' A B 3 18.712 -14.432 -4.108 1.00 34.06 C
ATOM 10 O3' A B 3 19.521 -13.672 -3.267 1.00 34.07 O
ATOM 11 C2' A B 3 18.581 -13.767 -5.462 1.00 35.02 C
ATOM 12 O2' A B 3 19.798 -13.160 -5.862 1.00 35.85 O
ATOM 13 C1' A B 3 18.214 -14.972 -6.340 1.00 34.71 C
ATOM 14 N9 A B 3 16.755 -15.194 -6.364 1.00 34.36 N
ATOM 15 C8 A B 3 16.039 -16.164 -5.695 1.00 34.21 C
ATOM 16 N7 A B 3 14.741 -16.118 -5.909 1.00 33.91 N
ATOM 17 C5 A B 3 14.599 -15.051 -6.790 1.00 33.02 C
ATOM 18 C6 A B 3 13.466 -14.486 -7.403 1.00 32.28 C
ATOM 19 N6 A B 3 12.251 -14.962 -7.167 1.00 31.70 N
ATOM 20 N1 A B 3 13.617 -13.424 -8.231 1.00 32.78 N
ATOM 21 C2 A B 3 14.865 -12.960 -8.410 1.00 33.45 C
ATOM 22 N3 A B 3 16.018 -13.408 -7.882 1.00 33.55 N
ATOM 23 C4 A B 3 15.818 -14.467 -7.074 1.00 33.18 C
ATOM 24 P C B 4 18.953 -12.895 -1.970 1.00 36.57 P
ATOM 25 OP1 C B 4 20.128 -12.247 -1.299 1.00 34.46 O
ATOM 26 OP2 C B 4 18.073 -13.836 -1.214 1.00 35.81 O
ATOM 27 O5' C B 4 18.060 -11.741 -2.625 1.00 34.57 O
TER
Atoms:
OP1: (3.275,-9.965,-14.065)
OP2: (4.144,-12.147,-13.076)
C3': (7.639,-8.118,-14.095)
C1': (8.449,-9.007,-12.035)
C5': (5.273,-8.479,-13.135)
O6: (10.151,-13.558,-8.621)
O4': (7.163,-8.475,-11.764)
C8: (7.737,-11.223,-11.129)
C2: (11.799,-10.561,-9.467)
C6: (10.348,-12.471,-9.142)
C5: (9.438,-11.806,-9.966)
C4: (9.772,-10.583,-10.478)
P: (3.998,-10.671,-12.989)
C4': (6.629,-7.841,-12.958)
C2': (8.445,-9.303,-13.533)
O2': (9.749,-9.415,-14.051)
N1: (11.532,-11.785,-8.934)
N2: (12.991,-10.031,-9.165)
N3: (10.948,-9.901,-10.255)
N7: (8.163,-12.192,-10.362)
N9: (8.653,-10.212,-11.242)
O5': (5.386,-9.907,-12.954)
O3': (8.432,-6.945,-14.466)
OP2: (4.144,-12.147,-13.076)
C3': (7.639,-8.118,-14.095)
C1': (8.449,-9.007,-12.035)
C5': (5.273,-8.479,-13.135)
O6: (10.151,-13.558,-8.621)
O4': (7.163,-8.475,-11.764)
C8: (7.737,-11.223,-11.129)
C2: (11.799,-10.561,-9.467)
C6: (10.348,-12.471,-9.142)
C5: (9.438,-11.806,-9.966)
C4: (9.772,-10.583,-10.478)
P: (3.998,-10.671,-12.989)
C4': (6.629,-7.841,-12.958)
C2': (8.445,-9.303,-13.533)
O2': (9.749,-9.415,-14.051)
N1: (11.532,-11.785,-8.934)
N2: (12.991,-10.031,-9.165)
N3: (10.948,-9.901,-10.255)
N7: (8.163,-12.192,-10.362)
N9: (8.653,-10.212,-11.242)
O5': (5.386,-9.907,-12.954)
O3': (8.432,-6.945,-14.466)
OP1: (17.885,-17.742,-0.791)
OP2: (15.735,-17.917,-2.154)
C3': (18.712,-14.432,-4.108)
C1': (18.214,-14.972,-6.340)
C5': (19.186,-16.847,-3.484)
O4': (18.897,-16.099,-5.803)
C8: (16.039,-16.164,-5.695)
O2': (19.798,-13.160,-5.862)
C6: (13.466,-14.486,-7.403)
C5: (14.599,-15.051,-6.790)
C4: (15.818,-14.467,-7.074)
P: (17.212,-17.953,-2.098)
C4': (19.415,-15.729,-4.480)
C2': (18.581,-13.767,-5.462)
C2: (14.865,-12.960,-8.410)
N1: (13.617,-13.424,-8.231)
N3: (16.018,-13.408,-7.882)
N6: (12.251,-14.962,-7.167)
N7: (14.741,-16.118,-5.909)
N9: (16.755,-15.194,-6.364)
O5': (17.807,-16.856,-3.108)
O3': (19.521,-13.672,-3.267)
OP2: (15.735,-17.917,-2.154)
C3': (18.712,-14.432,-4.108)
C1': (18.214,-14.972,-6.340)
C5': (19.186,-16.847,-3.484)
O4': (18.897,-16.099,-5.803)
C8: (16.039,-16.164,-5.695)
O2': (19.798,-13.160,-5.862)
C6: (13.466,-14.486,-7.403)
C5: (14.599,-15.051,-6.790)
C4: (15.818,-14.467,-7.074)
P: (17.212,-17.953,-2.098)
C4': (19.415,-15.729,-4.480)
C2': (18.581,-13.767,-5.462)
C2: (14.865,-12.960,-8.410)
N1: (13.617,-13.424,-8.231)
N3: (16.018,-13.408,-7.882)
N6: (12.251,-14.962,-7.167)
N7: (14.741,-16.118,-5.909)
N9: (16.755,-15.194,-6.364)
O5': (17.807,-16.856,-3.108)
O3': (19.521,-13.672,-3.267)
Image (generated by PyMOL):