ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OTL:0277:0351

Extra

PDB:
ATOM 1 O3' A A 276 70.848 121.735 2.257 1.00108.91 O
ATOM 2 P G A 277 69.706 122.584 3.011 1.00108.87 P
ATOM 3 OP1 G A 277 70.400 123.647 3.790 1.00107.96 O
ATOM 4 OP2 G A 277 68.803 121.628 3.713 1.00108.45 O
ATOM 5 O5' G A 277 68.873 123.278 1.837 1.00108.67 O
ATOM 6 C5' G A 277 69.338 124.502 1.221 1.00108.36 C
ATOM 7 C4' G A 277 68.581 124.777 -0.060 1.00106.78 C
ATOM 8 O4' G A 277 68.624 123.582 -0.887 1.00106.49 O
ATOM 9 C3' G A 277 67.090 125.063 0.060 1.00106.38 C
ATOM 10 O3' G A 277 66.796 126.415 0.407 1.00106.31 O
ATOM 11 C2' G A 277 66.600 124.728 -1.340 1.00105.80 C
ATOM 12 O2' G A 277 66.904 125.736 -2.283 1.00105.46 O
ATOM 13 C1' G A 277 67.425 123.478 -1.638 1.00105.55 C
ATOM 14 N9 G A 277 66.703 122.287 -1.205 1.00104.83 N
ATOM 15 C8 G A 277 67.003 121.440 -0.163 1.00104.74 C
ATOM 16 N7 G A 277 66.123 120.486 -0.010 1.00103.95 N
ATOM 17 C5 G A 277 65.194 120.715 -1.017 1.00104.08 C
ATOM 18 C6 G A 277 64.004 120.017 -1.354 1.00103.86 C
ATOM 19 O6 G A 277 63.505 119.027 -0.807 1.00104.19 O
ATOM 20 N1 G A 277 63.373 120.589 -2.452 1.00103.85 N
ATOM 21 C2 G A 277 63.821 121.691 -3.137 1.00103.97 C
ATOM 22 N2 G A 277 63.079 122.087 -4.177 1.00104.54 N
ATOM 23 N3 G A 277 64.916 122.355 -2.828 1.00104.04 N
ATOM 24 C4 G A 277 65.549 121.816 -1.768 1.00104.40 C
ATOM 25 P C A 278 65.287 126.821 0.817 1.00105.93 P
ATOM 26 OP1 C A 278 65.284 128.278 1.109 1.00106.65 O
ATOM 27 OP2 C A 278 64.786 125.865 1.843 1.00106.21 O
ATOM 28 O5' C A 278 64.442 126.592 -0.515 1.00103.55 O
TER

ATOM 1 O3' G B 350 53.702 116.499 -6.296 1.00107.27 O
ATOM 2 P A B 351 54.888 115.640 -6.959 1.00107.68 P
ATOM 3 OP1 A B 351 54.288 114.888 -8.094 1.00106.59 O
ATOM 4 OP2 A B 351 55.593 114.902 -5.869 1.00107.01 O
ATOM 5 O5' A B 351 55.899 116.732 -7.530 1.00107.27 O
ATOM 6 C5' A B 351 55.478 117.687 -8.521 1.00108.03 C
ATOM 7 C4' A B 351 56.451 118.837 -8.569 1.00108.03 C
ATOM 8 O4' A B 351 56.478 119.469 -7.264 1.00107.75 O
ATOM 9 C3' A B 351 57.899 118.445 -8.830 1.00108.40 C
ATOM 10 O3' A B 351 58.170 118.312 -10.227 1.00108.78 O
ATOM 11 C2' A B 351 58.667 119.590 -8.185 1.00108.02 C
ATOM 12 O2' A B 351 58.708 120.747 -8.992 1.00108.49 O
ATOM 13 C1' A B 351 57.801 119.867 -6.955 1.00108.01 C
ATOM 14 N9 A B 351 58.236 119.109 -5.785 1.00107.98 N
ATOM 15 C8 A B 351 57.744 117.916 -5.313 1.00107.76 C
ATOM 16 N7 A B 351 58.348 117.489 -4.230 1.00108.04 N
ATOM 17 C5 A B 351 59.303 118.465 -3.973 1.00107.85 C
ATOM 18 C6 A B 351 60.272 118.604 -2.960 1.00107.49 C
ATOM 19 N6 A B 351 60.450 117.724 -1.974 1.00106.99 N
ATOM 20 N1 A B 351 61.064 119.696 -2.998 1.00107.87 N
ATOM 21 C2 A B 351 60.888 120.584 -3.987 1.00108.00 C
ATOM 22 N3 A B 351 60.017 120.566 -4.991 1.00107.92 N
ATOM 23 C4 A B 351 59.244 119.468 -4.925 1.00108.12 C
ATOM 24 P C B 352 59.569 117.678 -10.719 1.00109.45 P
ATOM 25 OP1 C B 352 59.610 117.851 -12.199 1.00109.72 O
ATOM 26 OP2 C B 352 59.732 116.316 -10.132 1.00108.62 O
ATOM 27 O5' C B 352 60.676 118.640 -10.092 1.00107.47 O
TER

Atoms:
OP1: (70.400,123.647,3.790)
OP2: (68.803,121.628,3.713)
C3': (67.090,125.063,0.060)
C1': (67.425,123.478,-1.638)
C5': (69.338,124.502,1.221)
O6: (63.505,119.027,-0.807)
O4': (68.624,123.582,-0.887)
C8: (67.003,121.440,-0.163)
C2: (63.821,121.691,-3.137)
C6: (64.004,120.017,-1.354)
C5: (65.194,120.715,-1.017)
C4: (65.549,121.816,-1.768)
P: (69.706,122.584,3.011)
C4': (68.581,124.777,-0.060)
C2': (66.600,124.728,-1.340)
O2': (66.904,125.736,-2.283)
N1: (63.373,120.589,-2.452)
N2: (63.079,122.087,-4.177)
N3: (64.916,122.355,-2.828)
N7: (66.123,120.486,-0.010)
N9: (66.703,122.287,-1.205)
O5': (68.873,123.278,1.837)
O3': (66.796,126.415,0.407)
OP1: (54.288,114.888,-8.094)
OP2: (55.593,114.902,-5.869)
C3': (57.899,118.445,-8.830)
C1': (57.801,119.867,-6.955)
C5': (55.478,117.687,-8.521)
O4': (56.478,119.469,-7.264)
C8: (57.744,117.916,-5.313)
O2': (58.708,120.747,-8.992)
C6: (60.272,118.604,-2.960)
C5: (59.303,118.465,-3.973)
C4: (59.244,119.468,-4.925)
P: (54.888,115.640,-6.959)
C4': (56.451,118.837,-8.569)
C2': (58.667,119.590,-8.185)
C2: (60.888,120.584,-3.987)
N1: (61.064,119.696,-2.998)
N3: (60.017,120.566,-4.991)
N6: (60.450,117.724,-1.974)
N7: (58.348,117.489,-4.230)
N9: (58.236,119.109,-5.785)
O5': (55.899,116.732,-7.530)
O3': (58.170,118.312,-10.227)
Image (generated by PyMOL):
PyMOL image
show in jmol