Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:R126:R93
Extra
PDB:
ATOM 1 O3' G A 125 14.844 -4.864 65.365 1.00 64.47 O
ATOM 2 P G A 126 15.739 -3.545 65.201 1.00 65.39 P
ATOM 3 OP1 G A 126 14.825 -2.380 65.252 1.00 65.55 O
ATOM 4 OP2 G A 126 16.661 -3.705 64.052 1.00 65.30 O
ATOM 5 O5' G A 126 16.612 -3.565 66.536 1.00 65.87 O
ATOM 6 C5' G A 126 15.987 -3.782 67.790 1.00 67.24 C
ATOM 7 C4' G A 126 16.897 -4.596 68.685 1.00 68.34 C
ATOM 8 O4' G A 126 17.111 -5.914 68.116 1.00 68.49 O
ATOM 9 C3' G A 126 18.312 -4.060 68.815 1.00 69.16 C
ATOM 10 O3' G A 126 18.395 -2.949 69.701 1.00 70.67 O
ATOM 11 C2' G A 126 19.023 -5.300 69.341 1.00 68.82 C
ATOM 12 O2' G A 126 18.730 -5.598 70.695 1.00 68.86 O
ATOM 13 C1' G A 126 18.436 -6.343 68.392 1.00 68.36 C
ATOM 14 N9 G A 126 19.192 -6.430 67.141 1.00 67.81 N
ATOM 15 C8 G A 126 18.728 -6.200 65.867 1.00 67.73 C
ATOM 16 N7 G A 126 19.636 -6.344 64.941 1.00 67.38 N
ATOM 17 C5 G A 126 20.782 -6.686 65.643 1.00 67.18 C
ATOM 18 C6 G A 126 22.091 -6.969 65.174 1.00 67.04 C
ATOM 19 O6 G A 126 22.506 -6.967 64.005 1.00 66.59 O
ATOM 20 N1 G A 126 22.963 -7.273 66.221 1.00 67.21 N
ATOM 21 C2 G A 126 22.616 -7.302 67.553 1.00 67.45 C
ATOM 22 N2 G A 126 23.589 -7.615 68.421 1.00 67.23 N
ATOM 23 N3 G A 126 21.392 -7.042 68.001 1.00 67.49 N
ATOM 24 C4 G A 126 20.527 -6.742 66.998 1.00 67.39 C
ATOM 25 P U A 127 19.393 -1.738 69.365 1.00 71.75 P
ATOM 26 OP1 U A 127 18.575 -0.505 69.374 1.00 71.91 O
ATOM 27 OP2 U A 127 20.177 -2.069 68.156 1.00 71.74 O
ATOM 28 O5' U A 127 20.402 -1.703 70.609 1.00 72.17 O
TER
ATOM 1 O3' U B 92 32.624 -8.635 61.243 1.00 67.61 O
ATOM 2 P A B 93 32.119 -10.142 60.996 1.00 68.48 P
ATOM 3 OP1 A B 93 33.276 -10.944 60.539 1.00 68.46 O
ATOM 4 OP2 A B 93 30.878 -10.115 60.191 1.00 68.47 O
ATOM 5 O5' A B 93 31.750 -10.645 62.463 1.00 69.00 O
ATOM 6 C5' A B 93 32.712 -10.573 63.508 1.00 70.04 C
ATOM 7 C4' A B 93 32.054 -10.064 64.773 1.00 70.80 C
ATOM 8 O4' A B 93 31.418 -8.788 64.517 1.00 70.47 O
ATOM 9 C3' A B 93 30.921 -10.940 65.279 1.00 71.46 C
ATOM 10 O3' A B 93 31.440 -12.017 66.047 1.00 72.98 O
ATOM 11 C2' A B 93 30.101 -9.953 66.104 1.00 70.86 C
ATOM 12 O2' A B 93 30.617 -9.741 67.404 1.00 70.99 O
ATOM 13 C1' A B 93 30.221 -8.682 65.269 1.00 70.34 C
ATOM 14 N9 A B 93 29.079 -8.467 64.375 1.00 69.76 N
ATOM 15 C8 A B 93 29.005 -8.699 63.028 1.00 69.66 C
ATOM 16 N7 A B 93 27.843 -8.407 62.491 1.00 69.20 N
ATOM 17 C5 A B 93 27.097 -7.957 63.563 1.00 69.14 C
ATOM 18 C6 A B 93 25.770 -7.494 63.669 1.00 69.39 C
ATOM 19 N6 A B 93 24.934 -7.407 62.628 1.00 69.34 N
ATOM 20 N1 A B 93 25.334 -7.120 64.894 1.00 69.56 N
ATOM 21 C2 A B 93 26.171 -7.205 65.940 1.00 69.64 C
ATOM 22 N3 A B 93 27.437 -7.624 65.961 1.00 69.61 N
ATOM 23 C4 A B 93 27.842 -7.988 64.731 1.00 69.35 C
ATOM 24 P C B 94 30.875 -13.505 65.858 1.00 74.27 P
ATOM 25 OP1 C B 94 32.031 -14.405 65.657 1.00 74.36 O
ATOM 26 OP2 C B 94 29.779 -13.495 64.858 1.00 73.87 O
ATOM 27 O5' C B 94 30.301 -13.796 67.324 1.00 75.17 O
TER
ATOM 2 P G A 126 15.739 -3.545 65.201 1.00 65.39 P
ATOM 3 OP1 G A 126 14.825 -2.380 65.252 1.00 65.55 O
ATOM 4 OP2 G A 126 16.661 -3.705 64.052 1.00 65.30 O
ATOM 5 O5' G A 126 16.612 -3.565 66.536 1.00 65.87 O
ATOM 6 C5' G A 126 15.987 -3.782 67.790 1.00 67.24 C
ATOM 7 C4' G A 126 16.897 -4.596 68.685 1.00 68.34 C
ATOM 8 O4' G A 126 17.111 -5.914 68.116 1.00 68.49 O
ATOM 9 C3' G A 126 18.312 -4.060 68.815 1.00 69.16 C
ATOM 10 O3' G A 126 18.395 -2.949 69.701 1.00 70.67 O
ATOM 11 C2' G A 126 19.023 -5.300 69.341 1.00 68.82 C
ATOM 12 O2' G A 126 18.730 -5.598 70.695 1.00 68.86 O
ATOM 13 C1' G A 126 18.436 -6.343 68.392 1.00 68.36 C
ATOM 14 N9 G A 126 19.192 -6.430 67.141 1.00 67.81 N
ATOM 15 C8 G A 126 18.728 -6.200 65.867 1.00 67.73 C
ATOM 16 N7 G A 126 19.636 -6.344 64.941 1.00 67.38 N
ATOM 17 C5 G A 126 20.782 -6.686 65.643 1.00 67.18 C
ATOM 18 C6 G A 126 22.091 -6.969 65.174 1.00 67.04 C
ATOM 19 O6 G A 126 22.506 -6.967 64.005 1.00 66.59 O
ATOM 20 N1 G A 126 22.963 -7.273 66.221 1.00 67.21 N
ATOM 21 C2 G A 126 22.616 -7.302 67.553 1.00 67.45 C
ATOM 22 N2 G A 126 23.589 -7.615 68.421 1.00 67.23 N
ATOM 23 N3 G A 126 21.392 -7.042 68.001 1.00 67.49 N
ATOM 24 C4 G A 126 20.527 -6.742 66.998 1.00 67.39 C
ATOM 25 P U A 127 19.393 -1.738 69.365 1.00 71.75 P
ATOM 26 OP1 U A 127 18.575 -0.505 69.374 1.00 71.91 O
ATOM 27 OP2 U A 127 20.177 -2.069 68.156 1.00 71.74 O
ATOM 28 O5' U A 127 20.402 -1.703 70.609 1.00 72.17 O
TER
ATOM 1 O3' U B 92 32.624 -8.635 61.243 1.00 67.61 O
ATOM 2 P A B 93 32.119 -10.142 60.996 1.00 68.48 P
ATOM 3 OP1 A B 93 33.276 -10.944 60.539 1.00 68.46 O
ATOM 4 OP2 A B 93 30.878 -10.115 60.191 1.00 68.47 O
ATOM 5 O5' A B 93 31.750 -10.645 62.463 1.00 69.00 O
ATOM 6 C5' A B 93 32.712 -10.573 63.508 1.00 70.04 C
ATOM 7 C4' A B 93 32.054 -10.064 64.773 1.00 70.80 C
ATOM 8 O4' A B 93 31.418 -8.788 64.517 1.00 70.47 O
ATOM 9 C3' A B 93 30.921 -10.940 65.279 1.00 71.46 C
ATOM 10 O3' A B 93 31.440 -12.017 66.047 1.00 72.98 O
ATOM 11 C2' A B 93 30.101 -9.953 66.104 1.00 70.86 C
ATOM 12 O2' A B 93 30.617 -9.741 67.404 1.00 70.99 O
ATOM 13 C1' A B 93 30.221 -8.682 65.269 1.00 70.34 C
ATOM 14 N9 A B 93 29.079 -8.467 64.375 1.00 69.76 N
ATOM 15 C8 A B 93 29.005 -8.699 63.028 1.00 69.66 C
ATOM 16 N7 A B 93 27.843 -8.407 62.491 1.00 69.20 N
ATOM 17 C5 A B 93 27.097 -7.957 63.563 1.00 69.14 C
ATOM 18 C6 A B 93 25.770 -7.494 63.669 1.00 69.39 C
ATOM 19 N6 A B 93 24.934 -7.407 62.628 1.00 69.34 N
ATOM 20 N1 A B 93 25.334 -7.120 64.894 1.00 69.56 N
ATOM 21 C2 A B 93 26.171 -7.205 65.940 1.00 69.64 C
ATOM 22 N3 A B 93 27.437 -7.624 65.961 1.00 69.61 N
ATOM 23 C4 A B 93 27.842 -7.988 64.731 1.00 69.35 C
ATOM 24 P C B 94 30.875 -13.505 65.858 1.00 74.27 P
ATOM 25 OP1 C B 94 32.031 -14.405 65.657 1.00 74.36 O
ATOM 26 OP2 C B 94 29.779 -13.495 64.858 1.00 73.87 O
ATOM 27 O5' C B 94 30.301 -13.796 67.324 1.00 75.17 O
TER
Atoms:
OP1: (14.825,-2.380,65.252)
OP2: (16.661,-3.705,64.052)
C3': (18.312,-4.060,68.815)
C1': (18.436,-6.343,68.392)
C5': (15.987,-3.782,67.790)
O6: (22.506,-6.967,64.005)
O4': (17.111,-5.914,68.116)
C8: (18.728,-6.200,65.867)
C2: (22.616,-7.302,67.553)
C6: (22.091,-6.969,65.174)
C5: (20.782,-6.686,65.643)
C4: (20.527,-6.742,66.998)
P: (15.739,-3.545,65.201)
C4': (16.897,-4.596,68.685)
C2': (19.023,-5.300,69.341)
O2': (18.730,-5.598,70.695)
N1: (22.963,-7.273,66.221)
N2: (23.589,-7.615,68.421)
N3: (21.392,-7.042,68.001)
N7: (19.636,-6.344,64.941)
N9: (19.192,-6.430,67.141)
O5': (16.612,-3.565,66.536)
O3': (18.395,-2.949,69.701)
OP2: (16.661,-3.705,64.052)
C3': (18.312,-4.060,68.815)
C1': (18.436,-6.343,68.392)
C5': (15.987,-3.782,67.790)
O6: (22.506,-6.967,64.005)
O4': (17.111,-5.914,68.116)
C8: (18.728,-6.200,65.867)
C2: (22.616,-7.302,67.553)
C6: (22.091,-6.969,65.174)
C5: (20.782,-6.686,65.643)
C4: (20.527,-6.742,66.998)
P: (15.739,-3.545,65.201)
C4': (16.897,-4.596,68.685)
C2': (19.023,-5.300,69.341)
O2': (18.730,-5.598,70.695)
N1: (22.963,-7.273,66.221)
N2: (23.589,-7.615,68.421)
N3: (21.392,-7.042,68.001)
N7: (19.636,-6.344,64.941)
N9: (19.192,-6.430,67.141)
O5': (16.612,-3.565,66.536)
O3': (18.395,-2.949,69.701)
OP1: (33.276,-10.944,60.539)
OP2: (30.878,-10.115,60.191)
C3': (30.921,-10.940,65.279)
C1': (30.221,-8.682,65.269)
C5': (32.712,-10.573,63.508)
O4': (31.418,-8.788,64.517)
C8: (29.005,-8.699,63.028)
O2': (30.617,-9.741,67.404)
C6: (25.770,-7.494,63.669)
C5: (27.097,-7.957,63.563)
C4: (27.842,-7.988,64.731)
P: (32.119,-10.142,60.996)
C4': (32.054,-10.064,64.773)
C2': (30.101,-9.953,66.104)
C2: (26.171,-7.205,65.940)
N1: (25.334,-7.120,64.894)
N3: (27.437,-7.624,65.961)
N6: (24.934,-7.407,62.628)
N7: (27.843,-8.407,62.491)
N9: (29.079,-8.467,64.375)
O5': (31.750,-10.645,62.463)
O3': (31.440,-12.017,66.047)
OP2: (30.878,-10.115,60.191)
C3': (30.921,-10.940,65.279)
C1': (30.221,-8.682,65.269)
C5': (32.712,-10.573,63.508)
O4': (31.418,-8.788,64.517)
C8: (29.005,-8.699,63.028)
O2': (30.617,-9.741,67.404)
C6: (25.770,-7.494,63.669)
C5: (27.097,-7.957,63.563)
C4: (27.842,-7.988,64.731)
P: (32.119,-10.142,60.996)
C4': (32.054,-10.064,64.773)
C2': (30.101,-9.953,66.104)
C2: (26.171,-7.205,65.940)
N1: (25.334,-7.120,64.894)
N3: (27.437,-7.624,65.961)
N6: (24.934,-7.407,62.628)
N7: (27.843,-8.407,62.491)
N9: (29.079,-8.467,64.375)
O5': (31.750,-10.645,62.463)
O3': (31.440,-12.017,66.047)
Image (generated by PyMOL):