Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0277:0351
Extra
PDB:
ATOM 1 O3' A A 276 69.210 120.406 2.379 1.00105.68 O
ATOM 2 P G A 277 67.938 121.017 3.159 1.00105.17 P
ATOM 3 OP1 G A 277 68.468 121.875 4.251 1.00105.51 O
ATOM 4 OP2 G A 277 66.989 119.915 3.482 1.00103.69 O
ATOM 5 O5' G A 277 67.240 121.961 2.080 1.00104.29 O
ATOM 6 C5' G A 277 67.958 123.063 1.485 1.00101.95 C
ATOM 7 C4' G A 277 67.392 123.384 0.121 1.00100.25 C
ATOM 8 O4' G A 277 67.452 122.188 -0.704 1.00 99.13 O
ATOM 9 C3' G A 277 65.921 123.767 0.081 1.00 99.66 C
ATOM 10 O3' G A 277 65.677 125.126 0.416 1.00 99.71 O
ATOM 11 C2' G A 277 65.550 123.443 -1.357 1.00 98.37 C
ATOM 12 O2' G A 277 65.996 124.419 -2.277 1.00 98.19 O
ATOM 13 C1' G A 277 66.318 122.137 -1.559 1.00 97.71 C
ATOM 14 N9 G A 277 65.496 120.991 -1.177 1.00 96.01 N
ATOM 15 C8 G A 277 65.622 120.193 -0.062 1.00 95.29 C
ATOM 16 N7 G A 277 64.698 119.274 0.016 1.00 94.25 N
ATOM 17 C5 G A 277 63.922 119.473 -1.117 1.00 94.35 C
ATOM 18 C6 G A 277 62.770 118.790 -1.573 1.00 94.09 C
ATOM 19 O6 G A 277 62.172 117.843 -1.048 1.00 93.65 O
ATOM 20 N1 G A 277 62.310 119.319 -2.770 1.00 94.25 N
ATOM 21 C2 G A 277 62.875 120.369 -3.444 1.00 94.66 C
ATOM 22 N2 G A 277 62.282 120.732 -4.590 1.00 94.90 N
ATOM 23 N3 G A 277 63.942 121.017 -3.029 1.00 94.96 N
ATOM 24 C4 G A 277 64.411 120.520 -1.868 1.00 95.02 C
ATOM 25 P C A 278 64.215 125.559 0.930 1.00100.47 P
ATOM 26 OP1 C A 278 64.286 126.990 1.333 1.00100.65 O
ATOM 27 OP2 C A 278 63.746 124.541 1.912 1.00100.05 O
ATOM 28 O5' C A 278 63.302 125.451 -0.373 1.00 98.82 O
TER
ATOM 1 O3' G B 350 52.687 115.304 -6.864 1.00102.40 O
ATOM 2 P A B 351 53.891 114.532 -7.599 1.00102.29 P
ATOM 3 OP1 A B 351 53.325 113.925 -8.830 1.00102.86 O
ATOM 4 OP2 A B 351 54.588 113.668 -6.609 1.00102.61 O
ATOM 5 O5' A B 351 54.894 115.692 -8.023 1.00101.83 O
ATOM 6 C5' A B 351 54.509 116.696 -8.983 1.00102.08 C
ATOM 7 C4' A B 351 55.460 117.867 -8.915 1.00101.96 C
ATOM 8 O4' A B 351 55.414 118.421 -7.573 1.00101.40 O
ATOM 9 C3' A B 351 56.927 117.527 -9.131 1.00101.72 C
ATOM 10 O3' A B 351 57.269 117.484 -10.511 1.00102.39 O
ATOM 11 C2' A B 351 57.635 118.643 -8.378 1.00101.51 C
ATOM 12 O2' A B 351 57.685 119.860 -9.094 1.00101.56 O
ATOM 13 C1' A B 351 56.719 118.795 -7.164 1.00101.36 C
ATOM 14 N9 A B 351 57.122 117.908 -6.075 1.00101.11 N
ATOM 15 C8 A B 351 56.524 116.744 -5.648 1.00101.21 C
ATOM 16 N7 A B 351 57.145 116.167 -4.649 1.00100.75 N
ATOM 17 C5 A B 351 58.221 117.006 -4.398 1.00100.62 C
ATOM 18 C6 A B 351 59.262 116.953 -3.459 1.00100.37 C
ATOM 19 N6 A B 351 59.404 115.976 -2.560 1.00 99.89 N
ATOM 20 N1 A B 351 60.168 117.953 -3.476 1.00100.38 N
ATOM 21 C2 A B 351 60.028 118.932 -4.381 1.00100.04 C
ATOM 22 N3 A B 351 59.101 119.091 -5.311 1.00 99.97 N
ATOM 23 C4 A B 351 58.215 118.083 -5.266 1.00100.68 C
ATOM 24 P C B 352 58.686 116.873 -10.963 1.00102.80 P
ATOM 25 OP1 C B 352 58.766 117.026 -12.441 1.00103.19 O
ATOM 26 OP2 C B 352 58.854 115.528 -10.354 1.00102.26 O
ATOM 27 O5' C B 352 59.751 117.856 -10.303 1.00101.67 O
TER
ATOM 2 P G A 277 67.938 121.017 3.159 1.00105.17 P
ATOM 3 OP1 G A 277 68.468 121.875 4.251 1.00105.51 O
ATOM 4 OP2 G A 277 66.989 119.915 3.482 1.00103.69 O
ATOM 5 O5' G A 277 67.240 121.961 2.080 1.00104.29 O
ATOM 6 C5' G A 277 67.958 123.063 1.485 1.00101.95 C
ATOM 7 C4' G A 277 67.392 123.384 0.121 1.00100.25 C
ATOM 8 O4' G A 277 67.452 122.188 -0.704 1.00 99.13 O
ATOM 9 C3' G A 277 65.921 123.767 0.081 1.00 99.66 C
ATOM 10 O3' G A 277 65.677 125.126 0.416 1.00 99.71 O
ATOM 11 C2' G A 277 65.550 123.443 -1.357 1.00 98.37 C
ATOM 12 O2' G A 277 65.996 124.419 -2.277 1.00 98.19 O
ATOM 13 C1' G A 277 66.318 122.137 -1.559 1.00 97.71 C
ATOM 14 N9 G A 277 65.496 120.991 -1.177 1.00 96.01 N
ATOM 15 C8 G A 277 65.622 120.193 -0.062 1.00 95.29 C
ATOM 16 N7 G A 277 64.698 119.274 0.016 1.00 94.25 N
ATOM 17 C5 G A 277 63.922 119.473 -1.117 1.00 94.35 C
ATOM 18 C6 G A 277 62.770 118.790 -1.573 1.00 94.09 C
ATOM 19 O6 G A 277 62.172 117.843 -1.048 1.00 93.65 O
ATOM 20 N1 G A 277 62.310 119.319 -2.770 1.00 94.25 N
ATOM 21 C2 G A 277 62.875 120.369 -3.444 1.00 94.66 C
ATOM 22 N2 G A 277 62.282 120.732 -4.590 1.00 94.90 N
ATOM 23 N3 G A 277 63.942 121.017 -3.029 1.00 94.96 N
ATOM 24 C4 G A 277 64.411 120.520 -1.868 1.00 95.02 C
ATOM 25 P C A 278 64.215 125.559 0.930 1.00100.47 P
ATOM 26 OP1 C A 278 64.286 126.990 1.333 1.00100.65 O
ATOM 27 OP2 C A 278 63.746 124.541 1.912 1.00100.05 O
ATOM 28 O5' C A 278 63.302 125.451 -0.373 1.00 98.82 O
TER
ATOM 1 O3' G B 350 52.687 115.304 -6.864 1.00102.40 O
ATOM 2 P A B 351 53.891 114.532 -7.599 1.00102.29 P
ATOM 3 OP1 A B 351 53.325 113.925 -8.830 1.00102.86 O
ATOM 4 OP2 A B 351 54.588 113.668 -6.609 1.00102.61 O
ATOM 5 O5' A B 351 54.894 115.692 -8.023 1.00101.83 O
ATOM 6 C5' A B 351 54.509 116.696 -8.983 1.00102.08 C
ATOM 7 C4' A B 351 55.460 117.867 -8.915 1.00101.96 C
ATOM 8 O4' A B 351 55.414 118.421 -7.573 1.00101.40 O
ATOM 9 C3' A B 351 56.927 117.527 -9.131 1.00101.72 C
ATOM 10 O3' A B 351 57.269 117.484 -10.511 1.00102.39 O
ATOM 11 C2' A B 351 57.635 118.643 -8.378 1.00101.51 C
ATOM 12 O2' A B 351 57.685 119.860 -9.094 1.00101.56 O
ATOM 13 C1' A B 351 56.719 118.795 -7.164 1.00101.36 C
ATOM 14 N9 A B 351 57.122 117.908 -6.075 1.00101.11 N
ATOM 15 C8 A B 351 56.524 116.744 -5.648 1.00101.21 C
ATOM 16 N7 A B 351 57.145 116.167 -4.649 1.00100.75 N
ATOM 17 C5 A B 351 58.221 117.006 -4.398 1.00100.62 C
ATOM 18 C6 A B 351 59.262 116.953 -3.459 1.00100.37 C
ATOM 19 N6 A B 351 59.404 115.976 -2.560 1.00 99.89 N
ATOM 20 N1 A B 351 60.168 117.953 -3.476 1.00100.38 N
ATOM 21 C2 A B 351 60.028 118.932 -4.381 1.00100.04 C
ATOM 22 N3 A B 351 59.101 119.091 -5.311 1.00 99.97 N
ATOM 23 C4 A B 351 58.215 118.083 -5.266 1.00100.68 C
ATOM 24 P C B 352 58.686 116.873 -10.963 1.00102.80 P
ATOM 25 OP1 C B 352 58.766 117.026 -12.441 1.00103.19 O
ATOM 26 OP2 C B 352 58.854 115.528 -10.354 1.00102.26 O
ATOM 27 O5' C B 352 59.751 117.856 -10.303 1.00101.67 O
TER
Atoms:
OP1: (68.468,121.875,4.251)
OP2: (66.989,119.915,3.482)
C3': (65.921,123.767,0.081)
C1': (66.318,122.137,-1.559)
C5': (67.958,123.063,1.485)
O6: (62.172,117.843,-1.048)
O4': (67.452,122.188,-0.704)
C8: (65.622,120.193,-0.062)
C2: (62.875,120.369,-3.444)
C6: (62.770,118.790,-1.573)
C5: (63.922,119.473,-1.117)
C4: (64.411,120.520,-1.868)
P: (67.938,121.017,3.159)
C4': (67.392,123.384,0.121)
C2': (65.550,123.443,-1.357)
O2': (65.996,124.419,-2.277)
N1: (62.310,119.319,-2.770)
N2: (62.282,120.732,-4.590)
N3: (63.942,121.017,-3.029)
N7: (64.698,119.274,0.016)
N9: (65.496,120.991,-1.177)
O5': (67.240,121.961,2.080)
O3': (65.677,125.126,0.416)
OP2: (66.989,119.915,3.482)
C3': (65.921,123.767,0.081)
C1': (66.318,122.137,-1.559)
C5': (67.958,123.063,1.485)
O6: (62.172,117.843,-1.048)
O4': (67.452,122.188,-0.704)
C8: (65.622,120.193,-0.062)
C2: (62.875,120.369,-3.444)
C6: (62.770,118.790,-1.573)
C5: (63.922,119.473,-1.117)
C4: (64.411,120.520,-1.868)
P: (67.938,121.017,3.159)
C4': (67.392,123.384,0.121)
C2': (65.550,123.443,-1.357)
O2': (65.996,124.419,-2.277)
N1: (62.310,119.319,-2.770)
N2: (62.282,120.732,-4.590)
N3: (63.942,121.017,-3.029)
N7: (64.698,119.274,0.016)
N9: (65.496,120.991,-1.177)
O5': (67.240,121.961,2.080)
O3': (65.677,125.126,0.416)
OP1: (53.325,113.925,-8.830)
OP2: (54.588,113.668,-6.609)
C3': (56.927,117.527,-9.131)
C1': (56.719,118.795,-7.164)
C5': (54.509,116.696,-8.983)
O4': (55.414,118.421,-7.573)
C8: (56.524,116.744,-5.648)
O2': (57.685,119.860,-9.094)
C6: (59.262,116.953,-3.459)
C5: (58.221,117.006,-4.398)
C4: (58.215,118.083,-5.266)
P: (53.891,114.532,-7.599)
C4': (55.460,117.867,-8.915)
C2': (57.635,118.643,-8.378)
C2: (60.028,118.932,-4.381)
N1: (60.168,117.953,-3.476)
N3: (59.101,119.091,-5.311)
N6: (59.404,115.976,-2.560)
N7: (57.145,116.167,-4.649)
N9: (57.122,117.908,-6.075)
O5': (54.894,115.692,-8.023)
O3': (57.269,117.484,-10.511)
OP2: (54.588,113.668,-6.609)
C3': (56.927,117.527,-9.131)
C1': (56.719,118.795,-7.164)
C5': (54.509,116.696,-8.983)
O4': (55.414,118.421,-7.573)
C8: (56.524,116.744,-5.648)
O2': (57.685,119.860,-9.094)
C6: (59.262,116.953,-3.459)
C5: (58.221,117.006,-4.398)
C4: (58.215,118.083,-5.266)
P: (53.891,114.532,-7.599)
C4': (55.460,117.867,-8.915)
C2': (57.635,118.643,-8.378)
C2: (60.028,118.932,-4.381)
N1: (60.168,117.953,-3.476)
N3: (59.101,119.091,-5.311)
N6: (59.404,115.976,-2.560)
N7: (57.145,116.167,-4.649)
N9: (57.122,117.908,-6.075)
O5': (54.894,115.692,-8.023)
O3': (57.269,117.484,-10.511)
Image (generated by PyMOL):