Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0173:0140
Extra
PDB:
ATOM 1 O3' G A 172 65.348 126.413 22.843 1.00 44.53 O
ATOM 2 P G A 173 64.422 127.690 22.550 1.00 48.30 P
ATOM 3 OP1 G A 173 64.451 127.895 21.079 1.00 48.32 O
ATOM 4 OP2 G A 173 64.826 128.799 23.441 1.00 48.57 O
ATOM 5 O5' G A 173 62.964 127.214 22.988 1.00 48.98 O
ATOM 6 C5' G A 173 62.223 126.275 22.184 1.00 49.18 C
ATOM 7 C4' G A 173 61.522 125.259 23.055 1.00 48.43 C
ATOM 8 O4' G A 173 61.957 125.380 24.437 1.00 49.36 O
ATOM 9 C3' G A 173 60.003 125.349 23.084 1.00 48.45 C
ATOM 10 O3' G A 173 59.496 124.045 23.294 1.00 52.38 O
ATOM 11 C2' G A 173 59.752 126.138 24.364 1.00 48.53 C
ATOM 12 O2' G A 173 58.485 125.911 24.946 1.00 46.38 O
ATOM 13 C1' G A 173 60.831 125.556 25.268 1.00 48.96 C
ATOM 14 N9 G A 173 61.197 126.406 26.397 1.00 49.89 N
ATOM 15 C8 G A 173 61.808 127.634 26.351 1.00 50.29 C
ATOM 16 N7 G A 173 61.991 128.158 27.532 1.00 50.69 N
ATOM 17 C5 G A 173 61.474 127.218 28.411 1.00 49.26 C
ATOM 18 C6 G A 173 61.392 127.235 29.818 1.00 48.47 C
ATOM 19 O6 G A 173 61.766 128.112 30.599 1.00 47.69 O
ATOM 20 N1 G A 173 60.798 126.080 30.308 1.00 49.05 N
ATOM 21 C2 G A 173 60.337 125.041 29.541 1.00 49.10 C
ATOM 22 N2 G A 173 59.783 124.015 30.204 1.00 48.44 N
ATOM 23 N3 G A 173 60.409 125.012 28.224 1.00 49.04 N
ATOM 24 C4 G A 173 60.985 126.127 27.728 1.00 49.36 C
ATOM 25 P A A 174 59.368 123.013 22.068 1.00 54.40 P
ATOM 26 OP1 A A 174 60.688 122.925 21.397 1.00 53.86 O
ATOM 27 OP2 A A 174 58.159 123.326 21.269 1.00 54.03 O
ATOM 28 O5' A A 174 59.116 121.637 22.830 1.00 53.00 O
TER
ATOM 1 O3' A B 139 60.247 128.249 41.087 1.00 50.32 O
ATOM 2 P A B 140 61.784 127.867 41.357 1.00 51.07 P
ATOM 3 OP1 A B 140 61.933 127.875 42.832 1.00 54.36 O
ATOM 4 OP2 A B 140 62.696 128.683 40.517 1.00 52.31 O
ATOM 5 O5' A B 140 61.898 126.351 40.891 1.00 49.75 O
ATOM 6 C5' A B 140 61.020 125.367 41.449 1.00 47.38 C
ATOM 7 C4' A B 140 60.342 124.582 40.351 1.00 45.68 C
ATOM 8 O4' A B 140 59.809 125.491 39.355 1.00 42.75 O
ATOM 9 C3' A B 140 61.219 123.641 39.546 1.00 43.62 C
ATOM 10 O3' A B 140 61.381 122.411 40.238 1.00 43.94 O
ATOM 11 C2' A B 140 60.389 123.452 38.288 1.00 42.86 C
ATOM 12 O2' A B 140 59.313 122.564 38.517 1.00 42.42 O
ATOM 13 C1' A B 140 59.827 124.862 38.089 1.00 42.76 C
ATOM 14 N9 A B 140 60.596 125.694 37.162 1.00 42.97 N
ATOM 15 C8 A B 140 61.505 126.682 37.442 1.00 42.36 C
ATOM 16 N7 A B 140 61.995 127.267 36.376 1.00 42.21 N
ATOM 17 C5 A B 140 61.377 126.609 35.321 1.00 41.99 C
ATOM 18 C6 A B 140 61.462 126.762 33.928 1.00 41.13 C
ATOM 19 N6 A B 140 62.242 127.657 33.324 1.00 42.04 N
ATOM 20 N1 A B 140 60.707 125.954 33.162 1.00 40.65 N
ATOM 21 C2 A B 140 59.924 125.055 33.757 1.00 41.26 C
ATOM 22 N3 A B 140 59.757 124.813 35.049 1.00 42.04 N
ATOM 23 C4 A B 140 60.519 125.635 35.789 1.00 42.88 C
ATOM 24 P C B 141 62.618 121.454 39.888 1.00 46.11 P
ATOM 25 OP1 C B 141 62.529 120.287 40.802 1.00 43.84 O
ATOM 26 OP2 C B 141 63.865 122.272 39.852 1.00 44.97 O
ATOM 27 O5' C B 141 62.299 120.942 38.412 1.00 45.12 O
TER
ATOM 2 P G A 173 64.422 127.690 22.550 1.00 48.30 P
ATOM 3 OP1 G A 173 64.451 127.895 21.079 1.00 48.32 O
ATOM 4 OP2 G A 173 64.826 128.799 23.441 1.00 48.57 O
ATOM 5 O5' G A 173 62.964 127.214 22.988 1.00 48.98 O
ATOM 6 C5' G A 173 62.223 126.275 22.184 1.00 49.18 C
ATOM 7 C4' G A 173 61.522 125.259 23.055 1.00 48.43 C
ATOM 8 O4' G A 173 61.957 125.380 24.437 1.00 49.36 O
ATOM 9 C3' G A 173 60.003 125.349 23.084 1.00 48.45 C
ATOM 10 O3' G A 173 59.496 124.045 23.294 1.00 52.38 O
ATOM 11 C2' G A 173 59.752 126.138 24.364 1.00 48.53 C
ATOM 12 O2' G A 173 58.485 125.911 24.946 1.00 46.38 O
ATOM 13 C1' G A 173 60.831 125.556 25.268 1.00 48.96 C
ATOM 14 N9 G A 173 61.197 126.406 26.397 1.00 49.89 N
ATOM 15 C8 G A 173 61.808 127.634 26.351 1.00 50.29 C
ATOM 16 N7 G A 173 61.991 128.158 27.532 1.00 50.69 N
ATOM 17 C5 G A 173 61.474 127.218 28.411 1.00 49.26 C
ATOM 18 C6 G A 173 61.392 127.235 29.818 1.00 48.47 C
ATOM 19 O6 G A 173 61.766 128.112 30.599 1.00 47.69 O
ATOM 20 N1 G A 173 60.798 126.080 30.308 1.00 49.05 N
ATOM 21 C2 G A 173 60.337 125.041 29.541 1.00 49.10 C
ATOM 22 N2 G A 173 59.783 124.015 30.204 1.00 48.44 N
ATOM 23 N3 G A 173 60.409 125.012 28.224 1.00 49.04 N
ATOM 24 C4 G A 173 60.985 126.127 27.728 1.00 49.36 C
ATOM 25 P A A 174 59.368 123.013 22.068 1.00 54.40 P
ATOM 26 OP1 A A 174 60.688 122.925 21.397 1.00 53.86 O
ATOM 27 OP2 A A 174 58.159 123.326 21.269 1.00 54.03 O
ATOM 28 O5' A A 174 59.116 121.637 22.830 1.00 53.00 O
TER
ATOM 1 O3' A B 139 60.247 128.249 41.087 1.00 50.32 O
ATOM 2 P A B 140 61.784 127.867 41.357 1.00 51.07 P
ATOM 3 OP1 A B 140 61.933 127.875 42.832 1.00 54.36 O
ATOM 4 OP2 A B 140 62.696 128.683 40.517 1.00 52.31 O
ATOM 5 O5' A B 140 61.898 126.351 40.891 1.00 49.75 O
ATOM 6 C5' A B 140 61.020 125.367 41.449 1.00 47.38 C
ATOM 7 C4' A B 140 60.342 124.582 40.351 1.00 45.68 C
ATOM 8 O4' A B 140 59.809 125.491 39.355 1.00 42.75 O
ATOM 9 C3' A B 140 61.219 123.641 39.546 1.00 43.62 C
ATOM 10 O3' A B 140 61.381 122.411 40.238 1.00 43.94 O
ATOM 11 C2' A B 140 60.389 123.452 38.288 1.00 42.86 C
ATOM 12 O2' A B 140 59.313 122.564 38.517 1.00 42.42 O
ATOM 13 C1' A B 140 59.827 124.862 38.089 1.00 42.76 C
ATOM 14 N9 A B 140 60.596 125.694 37.162 1.00 42.97 N
ATOM 15 C8 A B 140 61.505 126.682 37.442 1.00 42.36 C
ATOM 16 N7 A B 140 61.995 127.267 36.376 1.00 42.21 N
ATOM 17 C5 A B 140 61.377 126.609 35.321 1.00 41.99 C
ATOM 18 C6 A B 140 61.462 126.762 33.928 1.00 41.13 C
ATOM 19 N6 A B 140 62.242 127.657 33.324 1.00 42.04 N
ATOM 20 N1 A B 140 60.707 125.954 33.162 1.00 40.65 N
ATOM 21 C2 A B 140 59.924 125.055 33.757 1.00 41.26 C
ATOM 22 N3 A B 140 59.757 124.813 35.049 1.00 42.04 N
ATOM 23 C4 A B 140 60.519 125.635 35.789 1.00 42.88 C
ATOM 24 P C B 141 62.618 121.454 39.888 1.00 46.11 P
ATOM 25 OP1 C B 141 62.529 120.287 40.802 1.00 43.84 O
ATOM 26 OP2 C B 141 63.865 122.272 39.852 1.00 44.97 O
ATOM 27 O5' C B 141 62.299 120.942 38.412 1.00 45.12 O
TER
Atoms:
OP1: (64.451,127.895,21.079)
OP2: (64.826,128.799,23.441)
C3': (60.003,125.349,23.084)
C1': (60.831,125.556,25.268)
C5': (62.223,126.275,22.184)
O6: (61.766,128.112,30.599)
O4': (61.957,125.380,24.437)
C8: (61.808,127.634,26.351)
C2: (60.337,125.041,29.541)
C6: (61.392,127.235,29.818)
C5: (61.474,127.218,28.411)
C4: (60.985,126.127,27.728)
P: (64.422,127.690,22.550)
C4': (61.522,125.259,23.055)
C2': (59.752,126.138,24.364)
O2': (58.485,125.911,24.946)
N1: (60.798,126.080,30.308)
N2: (59.783,124.015,30.204)
N3: (60.409,125.012,28.224)
N7: (61.991,128.158,27.532)
N9: (61.197,126.406,26.397)
O5': (62.964,127.214,22.988)
O3': (59.496,124.045,23.294)
OP2: (64.826,128.799,23.441)
C3': (60.003,125.349,23.084)
C1': (60.831,125.556,25.268)
C5': (62.223,126.275,22.184)
O6: (61.766,128.112,30.599)
O4': (61.957,125.380,24.437)
C8: (61.808,127.634,26.351)
C2: (60.337,125.041,29.541)
C6: (61.392,127.235,29.818)
C5: (61.474,127.218,28.411)
C4: (60.985,126.127,27.728)
P: (64.422,127.690,22.550)
C4': (61.522,125.259,23.055)
C2': (59.752,126.138,24.364)
O2': (58.485,125.911,24.946)
N1: (60.798,126.080,30.308)
N2: (59.783,124.015,30.204)
N3: (60.409,125.012,28.224)
N7: (61.991,128.158,27.532)
N9: (61.197,126.406,26.397)
O5': (62.964,127.214,22.988)
O3': (59.496,124.045,23.294)
OP1: (61.933,127.875,42.832)
OP2: (62.696,128.683,40.517)
C3': (61.219,123.641,39.546)
C1': (59.827,124.862,38.089)
C5': (61.020,125.367,41.449)
O4': (59.809,125.491,39.355)
C8: (61.505,126.682,37.442)
O2': (59.313,122.564,38.517)
C6: (61.462,126.762,33.928)
C5: (61.377,126.609,35.321)
C4: (60.519,125.635,35.789)
P: (61.784,127.867,41.357)
C4': (60.342,124.582,40.351)
C2': (60.389,123.452,38.288)
C2: (59.924,125.055,33.757)
N1: (60.707,125.954,33.162)
N3: (59.757,124.813,35.049)
N6: (62.242,127.657,33.324)
N7: (61.995,127.267,36.376)
N9: (60.596,125.694,37.162)
O5': (61.898,126.351,40.891)
O3': (61.381,122.411,40.238)
OP2: (62.696,128.683,40.517)
C3': (61.219,123.641,39.546)
C1': (59.827,124.862,38.089)
C5': (61.020,125.367,41.449)
O4': (59.809,125.491,39.355)
C8: (61.505,126.682,37.442)
O2': (59.313,122.564,38.517)
C6: (61.462,126.762,33.928)
C5: (61.377,126.609,35.321)
C4: (60.519,125.635,35.789)
P: (61.784,127.867,41.357)
C4': (60.342,124.582,40.351)
C2': (60.389,123.452,38.288)
C2: (59.924,125.055,33.757)
N1: (60.707,125.954,33.162)
N3: (59.757,124.813,35.049)
N6: (62.242,127.657,33.324)
N7: (61.995,127.267,36.376)
N9: (60.596,125.694,37.162)
O5': (61.898,126.351,40.891)
O3': (61.381,122.411,40.238)
Image (generated by PyMOL):