Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1X9C:D5:C11
Extra
PDB:
ATOM 1 O3' G A 4 28.603 3.416 39.556 1.00 54.17 O
ATOM 2 P G A 5 27.501 4.546 39.869 1.00 56.62 P
ATOM 3 OP1 G A 5 26.217 4.062 39.305 1.00 56.71 O
ATOM 4 OP2 G A 5 28.033 5.862 39.445 1.00 53.06 O
ATOM 5 O5' G A 5 27.388 4.533 41.460 1.00 50.59 O
ATOM 6 C5' G A 5 27.394 3.305 42.194 1.00 52.21 C
ATOM 7 C4' G A 5 27.705 3.586 43.644 1.00 56.53 C
ATOM 8 O4' G A 5 29.005 4.213 43.732 1.00 57.45 O
ATOM 9 C3' G A 5 26.698 4.591 44.187 1.00 53.90 C
ATOM 10 O3' G A 5 26.435 4.234 45.555 1.00 58.30 O
ATOM 11 C2' G A 5 27.388 5.936 43.975 1.00 54.74 C
ATOM 12 O2' G A 5 27.082 6.955 44.857 1.00 51.84 O
ATOM 13 C1' G A 5 28.856 5.549 44.125 1.00 52.90 C
ATOM 14 N9 G A 5 29.907 6.364 43.530 1.00 50.32 N
ATOM 15 C8 G A 5 29.948 6.923 42.276 1.00 51.27 C
ATOM 16 N7 G A 5 31.039 7.611 42.059 1.00 50.87 N
ATOM 17 C5 G A 5 31.756 7.500 43.245 1.00 48.74 C
ATOM 18 C6 G A 5 33.012 8.047 43.617 1.00 47.00 C
ATOM 19 O6 G A 5 33.751 8.785 42.961 1.00 50.93 O
ATOM 20 N1 G A 5 33.380 7.666 44.902 1.00 44.94 N
ATOM 21 C2 G A 5 32.632 6.874 45.731 1.00 47.80 C
ATOM 22 N2 G A 5 33.169 6.608 46.936 1.00 47.58 N
ATOM 23 N3 G A 5 31.446 6.375 45.406 1.00 47.67 N
ATOM 24 C4 G A 5 31.076 6.726 44.156 1.00 48.59 C
ATOM 25 P U A 6 25.002 4.495 46.233 1.00 62.96 P
ATOM 26 OP1 U A 6 24.747 3.351 47.137 1.00 53.14 O
ATOM 27 OP2 U A 6 24.021 4.822 45.166 1.00 60.54 O
ATOM 28 O5' U A 6 25.234 5.768 47.174 1.00 64.76 O
TER
ATOM 1 O3' C B 10 42.532 14.769 45.587 1.00 50.36 O
ATOM 2 P A B 11 42.997 13.240 45.721 1.00 52.40 P
ATOM 3 OP1 A B 11 44.389 13.265 46.228 1.00 49.89 O
ATOM 4 OP2 A B 11 42.684 12.544 44.444 1.00 50.92 O
ATOM 5 O5' A B 11 42.061 12.627 46.856 1.00 49.09 O
ATOM 6 C5' A B 11 42.251 12.983 48.217 1.00 49.27 C
ATOM 7 C4' A B 11 41.191 12.344 49.080 1.00 52.31 C
ATOM 8 O4' A B 11 39.881 12.786 48.632 1.00 51.37 O
ATOM 9 C3' A B 11 41.104 10.838 48.991 1.00 50.56 C
ATOM 10 O3' A B 11 42.055 10.212 49.827 1.00 56.84 O
ATOM 11 C2' A B 11 39.675 10.575 49.431 1.00 49.45 C
ATOM 12 O2' A B 11 39.518 10.711 50.827 1.00 50.02 O
ATOM 13 C1' A B 11 38.949 11.730 48.757 1.00 44.47 C
ATOM 14 N9 A B 11 38.484 11.396 47.416 1.00 43.67 N
ATOM 15 C8 A B 11 39.037 11.800 46.229 1.00 42.69 C
ATOM 16 N7 A B 11 38.372 11.399 45.172 1.00 42.11 N
ATOM 17 C5 A B 11 37.318 10.674 45.698 1.00 39.15 C
ATOM 18 C6 A B 11 36.242 10.017 45.096 1.00 41.31 C
ATOM 19 N6 A B 11 36.038 9.996 43.776 1.00 40.72 N
ATOM 20 N1 A B 11 35.362 9.382 45.901 1.00 41.99 N
ATOM 21 C2 A B 11 35.562 9.425 47.229 1.00 42.33 C
ATOM 22 N3 A B 11 36.532 10.025 47.915 1.00 42.72 N
ATOM 23 C4 A B 11 37.386 10.642 47.079 1.00 42.33 C
ATOM 24 P C B 12 42.656 8.787 49.395 1.00 58.04 P
ATOM 25 OP1 C B 12 43.561 8.361 50.491 1.00 56.30 O
ATOM 26 OP2 C B 12 43.181 8.917 48.010 1.00 50.22 O
ATOM 27 O5' C B 12 41.386 7.821 49.379 1.00 53.81 O
TER
ATOM 2 P G A 5 27.501 4.546 39.869 1.00 56.62 P
ATOM 3 OP1 G A 5 26.217 4.062 39.305 1.00 56.71 O
ATOM 4 OP2 G A 5 28.033 5.862 39.445 1.00 53.06 O
ATOM 5 O5' G A 5 27.388 4.533 41.460 1.00 50.59 O
ATOM 6 C5' G A 5 27.394 3.305 42.194 1.00 52.21 C
ATOM 7 C4' G A 5 27.705 3.586 43.644 1.00 56.53 C
ATOM 8 O4' G A 5 29.005 4.213 43.732 1.00 57.45 O
ATOM 9 C3' G A 5 26.698 4.591 44.187 1.00 53.90 C
ATOM 10 O3' G A 5 26.435 4.234 45.555 1.00 58.30 O
ATOM 11 C2' G A 5 27.388 5.936 43.975 1.00 54.74 C
ATOM 12 O2' G A 5 27.082 6.955 44.857 1.00 51.84 O
ATOM 13 C1' G A 5 28.856 5.549 44.125 1.00 52.90 C
ATOM 14 N9 G A 5 29.907 6.364 43.530 1.00 50.32 N
ATOM 15 C8 G A 5 29.948 6.923 42.276 1.00 51.27 C
ATOM 16 N7 G A 5 31.039 7.611 42.059 1.00 50.87 N
ATOM 17 C5 G A 5 31.756 7.500 43.245 1.00 48.74 C
ATOM 18 C6 G A 5 33.012 8.047 43.617 1.00 47.00 C
ATOM 19 O6 G A 5 33.751 8.785 42.961 1.00 50.93 O
ATOM 20 N1 G A 5 33.380 7.666 44.902 1.00 44.94 N
ATOM 21 C2 G A 5 32.632 6.874 45.731 1.00 47.80 C
ATOM 22 N2 G A 5 33.169 6.608 46.936 1.00 47.58 N
ATOM 23 N3 G A 5 31.446 6.375 45.406 1.00 47.67 N
ATOM 24 C4 G A 5 31.076 6.726 44.156 1.00 48.59 C
ATOM 25 P U A 6 25.002 4.495 46.233 1.00 62.96 P
ATOM 26 OP1 U A 6 24.747 3.351 47.137 1.00 53.14 O
ATOM 27 OP2 U A 6 24.021 4.822 45.166 1.00 60.54 O
ATOM 28 O5' U A 6 25.234 5.768 47.174 1.00 64.76 O
TER
ATOM 1 O3' C B 10 42.532 14.769 45.587 1.00 50.36 O
ATOM 2 P A B 11 42.997 13.240 45.721 1.00 52.40 P
ATOM 3 OP1 A B 11 44.389 13.265 46.228 1.00 49.89 O
ATOM 4 OP2 A B 11 42.684 12.544 44.444 1.00 50.92 O
ATOM 5 O5' A B 11 42.061 12.627 46.856 1.00 49.09 O
ATOM 6 C5' A B 11 42.251 12.983 48.217 1.00 49.27 C
ATOM 7 C4' A B 11 41.191 12.344 49.080 1.00 52.31 C
ATOM 8 O4' A B 11 39.881 12.786 48.632 1.00 51.37 O
ATOM 9 C3' A B 11 41.104 10.838 48.991 1.00 50.56 C
ATOM 10 O3' A B 11 42.055 10.212 49.827 1.00 56.84 O
ATOM 11 C2' A B 11 39.675 10.575 49.431 1.00 49.45 C
ATOM 12 O2' A B 11 39.518 10.711 50.827 1.00 50.02 O
ATOM 13 C1' A B 11 38.949 11.730 48.757 1.00 44.47 C
ATOM 14 N9 A B 11 38.484 11.396 47.416 1.00 43.67 N
ATOM 15 C8 A B 11 39.037 11.800 46.229 1.00 42.69 C
ATOM 16 N7 A B 11 38.372 11.399 45.172 1.00 42.11 N
ATOM 17 C5 A B 11 37.318 10.674 45.698 1.00 39.15 C
ATOM 18 C6 A B 11 36.242 10.017 45.096 1.00 41.31 C
ATOM 19 N6 A B 11 36.038 9.996 43.776 1.00 40.72 N
ATOM 20 N1 A B 11 35.362 9.382 45.901 1.00 41.99 N
ATOM 21 C2 A B 11 35.562 9.425 47.229 1.00 42.33 C
ATOM 22 N3 A B 11 36.532 10.025 47.915 1.00 42.72 N
ATOM 23 C4 A B 11 37.386 10.642 47.079 1.00 42.33 C
ATOM 24 P C B 12 42.656 8.787 49.395 1.00 58.04 P
ATOM 25 OP1 C B 12 43.561 8.361 50.491 1.00 56.30 O
ATOM 26 OP2 C B 12 43.181 8.917 48.010 1.00 50.22 O
ATOM 27 O5' C B 12 41.386 7.821 49.379 1.00 53.81 O
TER
Atoms:
OP1: (26.217,4.062,39.305)
OP2: (28.033,5.862,39.445)
C3': (26.698,4.591,44.187)
C1': (28.856,5.549,44.125)
C5': (27.394,3.305,42.194)
O6: (33.751,8.785,42.961)
O4': (29.005,4.213,43.732)
C8: (29.948,6.923,42.276)
C2: (32.632,6.874,45.731)
C6: (33.012,8.047,43.617)
C5: (31.756,7.500,43.245)
C4: (31.076,6.726,44.156)
P: (27.501,4.546,39.869)
C4': (27.705,3.586,43.644)
C2': (27.388,5.936,43.975)
O2': (27.082,6.955,44.857)
N1: (33.380,7.666,44.902)
N2: (33.169,6.608,46.936)
N3: (31.446,6.375,45.406)
N7: (31.039,7.611,42.059)
N9: (29.907,6.364,43.530)
O5': (27.388,4.533,41.460)
O3': (26.435,4.234,45.555)
OP2: (28.033,5.862,39.445)
C3': (26.698,4.591,44.187)
C1': (28.856,5.549,44.125)
C5': (27.394,3.305,42.194)
O6: (33.751,8.785,42.961)
O4': (29.005,4.213,43.732)
C8: (29.948,6.923,42.276)
C2: (32.632,6.874,45.731)
C6: (33.012,8.047,43.617)
C5: (31.756,7.500,43.245)
C4: (31.076,6.726,44.156)
P: (27.501,4.546,39.869)
C4': (27.705,3.586,43.644)
C2': (27.388,5.936,43.975)
O2': (27.082,6.955,44.857)
N1: (33.380,7.666,44.902)
N2: (33.169,6.608,46.936)
N3: (31.446,6.375,45.406)
N7: (31.039,7.611,42.059)
N9: (29.907,6.364,43.530)
O5': (27.388,4.533,41.460)
O3': (26.435,4.234,45.555)
OP1: (44.389,13.265,46.228)
OP2: (42.684,12.544,44.444)
C3': (41.104,10.838,48.991)
C1': (38.949,11.730,48.757)
C5': (42.251,12.983,48.217)
O4': (39.881,12.786,48.632)
C8: (39.037,11.800,46.229)
O2': (39.518,10.711,50.827)
C6: (36.242,10.017,45.096)
C5: (37.318,10.674,45.698)
C4: (37.386,10.642,47.079)
P: (42.997,13.240,45.721)
C4': (41.191,12.344,49.080)
C2': (39.675,10.575,49.431)
C2: (35.562,9.425,47.229)
N1: (35.362,9.382,45.901)
N3: (36.532,10.025,47.915)
N6: (36.038,9.996,43.776)
N7: (38.372,11.399,45.172)
N9: (38.484,11.396,47.416)
O5': (42.061,12.627,46.856)
O3': (42.055,10.212,49.827)
OP2: (42.684,12.544,44.444)
C3': (41.104,10.838,48.991)
C1': (38.949,11.730,48.757)
C5': (42.251,12.983,48.217)
O4': (39.881,12.786,48.632)
C8: (39.037,11.800,46.229)
O2': (39.518,10.711,50.827)
C6: (36.242,10.017,45.096)
C5: (37.318,10.674,45.698)
C4: (37.386,10.642,47.079)
P: (42.997,13.240,45.721)
C4': (41.191,12.344,49.080)
C2': (39.675,10.575,49.431)
C2: (35.562,9.425,47.229)
N1: (35.362,9.382,45.901)
N3: (36.532,10.025,47.915)
N6: (36.038,9.996,43.776)
N7: (38.372,11.399,45.172)
N9: (38.484,11.396,47.416)
O5': (42.061,12.627,46.856)
O3': (42.055,10.212,49.827)
Image (generated by PyMOL):