Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1553:A1426
Extra
PDB:
ATOM 1 O3' U A1552 -17.776 -14.051 20.371 1.00 26.18 O
ATOM 2 P G A1553 -18.527 -13.031 19.409 1.00 9.18 P
ATOM 3 OP1 G A1553 -19.214 -12.032 20.278 1.00 9.18 O
ATOM 4 OP2 G A1553 -19.341 -13.850 18.459 1.00 9.18 O
ATOM 5 O5' G A1553 -17.332 -12.329 18.636 1.00 9.18 O
ATOM 6 C5' G A1553 -16.023 -12.331 19.169 1.00 9.18 C
ATOM 7 C4' G A1553 -15.037 -11.869 18.143 1.00 9.18 C
ATOM 8 O4' G A1553 -14.721 -12.964 17.243 1.00 9.18 O
ATOM 9 C3' G A1553 -15.520 -10.755 17.235 1.00 9.18 C
ATOM 10 O3' G A1553 -15.357 -9.477 17.820 1.00 9.18 O
ATOM 11 C2' G A1553 -14.675 -10.957 15.988 1.00 9.18 C
ATOM 12 O2' G A1553 -13.373 -10.414 16.175 1.00 9.18 O
ATOM 13 C1' G A1553 -14.563 -12.480 15.928 1.00 9.18 C
ATOM 14 N9 G A1553 -15.612 -13.071 15.081 1.00 8.70 N
ATOM 15 C8 G A1553 -16.551 -13.992 15.471 1.00 8.70 C
ATOM 16 N7 G A1553 -17.384 -14.332 14.528 1.00 8.70 N
ATOM 17 C5 G A1553 -16.966 -13.585 13.452 1.00 8.70 C
ATOM 18 C6 G A1553 -17.500 -13.540 12.155 1.00 8.70 C
ATOM 19 O6 G A1553 -18.465 -14.184 11.737 1.00 8.70 O
ATOM 20 N1 G A1553 -16.785 -12.657 11.348 1.00 8.70 N
ATOM 21 C2 G A1553 -15.701 -11.919 11.756 1.00 8.70 C
ATOM 22 N2 G A1553 -15.144 -11.114 10.844 1.00 8.70 N
ATOM 23 N3 G A1553 -15.195 -11.956 12.978 1.00 8.70 N
ATOM 24 C4 G A1553 -15.872 -12.808 13.766 1.00 8.70 C
ATOM 25 P C A1554 -16.465 -8.323 17.634 1.00 0.01 P
ATOM 26 OP1 C A1554 -15.909 -7.109 18.258 1.00 0.01 O
ATOM 27 OP2 C A1554 -17.754 -8.862 18.155 1.00 0.01 O
ATOM 28 O5' C A1554 -16.552 -8.129 16.053 1.00 0.01 O
TER
ATOM 1 O3' G B1425 -25.303 -12.927 3.317 1.00 0.01 O
ATOM 2 P A B1426 -24.097 -13.671 2.567 1.00 0.01 P
ATOM 3 OP1 A B1426 -24.423 -13.706 1.140 1.00 0.01 O
ATOM 4 OP2 A B1426 -23.837 -14.964 3.274 1.00 0.01 O
ATOM 5 O5' A B1426 -22.914 -12.654 2.804 1.00 0.01 O
ATOM 6 C5' A B1426 -23.085 -11.289 2.449 1.00 0.01 C
ATOM 7 C4' A B1426 -21.850 -10.492 2.717 1.00 0.01 C
ATOM 8 O4' A B1426 -21.720 -10.287 4.138 1.00 0.01 O
ATOM 9 C3' A B1426 -20.558 -11.147 2.292 1.00 0.01 C
ATOM 10 O3' A B1426 -20.236 -10.847 0.947 1.00 0.01 O
ATOM 11 C2' A B1426 -19.551 -10.602 3.287 1.00 0.01 C
ATOM 12 O2' A B1426 -19.109 -9.319 2.879 1.00 0.01 O
ATOM 13 C1' A B1426 -20.394 -10.426 4.536 1.00 0.01 C
ATOM 14 N9 A B1426 -20.323 -11.562 5.446 1.00 0.01 N
ATOM 15 C8 A B1426 -21.106 -12.680 5.459 1.00 0.01 C
ATOM 16 N7 A B1426 -20.853 -13.485 6.466 1.00 0.01 N
ATOM 17 C5 A B1426 -19.852 -12.832 7.147 1.00 0.01 C
ATOM 18 C6 A B1426 -19.153 -13.161 8.284 1.00 0.01 C
ATOM 19 N6 A B1426 -19.368 -14.278 8.952 1.00 0.01 N
ATOM 20 N1 A B1426 -18.232 -12.312 8.725 1.00 0.01 N
ATOM 21 C2 A B1426 -18.025 -11.200 8.041 1.00 0.01 C
ATOM 22 N3 A B1426 -18.618 -10.761 6.936 1.00 0.01 N
ATOM 23 C4 A B1426 -19.533 -11.644 6.545 1.00 0.01 C
ATOM 24 P A B1427 -19.561 -11.959 0.012 1.00 15.24 P
ATOM 25 OP1 A B1427 -19.735 -11.515 -1.409 1.00 15.24 O
ATOM 26 OP2 A B1427 -20.093 -13.277 0.428 1.00 15.24 O
ATOM 27 O5' A B1427 -18.044 -11.860 0.419 1.00 15.24 O
TER
ATOM 2 P G A1553 -18.527 -13.031 19.409 1.00 9.18 P
ATOM 3 OP1 G A1553 -19.214 -12.032 20.278 1.00 9.18 O
ATOM 4 OP2 G A1553 -19.341 -13.850 18.459 1.00 9.18 O
ATOM 5 O5' G A1553 -17.332 -12.329 18.636 1.00 9.18 O
ATOM 6 C5' G A1553 -16.023 -12.331 19.169 1.00 9.18 C
ATOM 7 C4' G A1553 -15.037 -11.869 18.143 1.00 9.18 C
ATOM 8 O4' G A1553 -14.721 -12.964 17.243 1.00 9.18 O
ATOM 9 C3' G A1553 -15.520 -10.755 17.235 1.00 9.18 C
ATOM 10 O3' G A1553 -15.357 -9.477 17.820 1.00 9.18 O
ATOM 11 C2' G A1553 -14.675 -10.957 15.988 1.00 9.18 C
ATOM 12 O2' G A1553 -13.373 -10.414 16.175 1.00 9.18 O
ATOM 13 C1' G A1553 -14.563 -12.480 15.928 1.00 9.18 C
ATOM 14 N9 G A1553 -15.612 -13.071 15.081 1.00 8.70 N
ATOM 15 C8 G A1553 -16.551 -13.992 15.471 1.00 8.70 C
ATOM 16 N7 G A1553 -17.384 -14.332 14.528 1.00 8.70 N
ATOM 17 C5 G A1553 -16.966 -13.585 13.452 1.00 8.70 C
ATOM 18 C6 G A1553 -17.500 -13.540 12.155 1.00 8.70 C
ATOM 19 O6 G A1553 -18.465 -14.184 11.737 1.00 8.70 O
ATOM 20 N1 G A1553 -16.785 -12.657 11.348 1.00 8.70 N
ATOM 21 C2 G A1553 -15.701 -11.919 11.756 1.00 8.70 C
ATOM 22 N2 G A1553 -15.144 -11.114 10.844 1.00 8.70 N
ATOM 23 N3 G A1553 -15.195 -11.956 12.978 1.00 8.70 N
ATOM 24 C4 G A1553 -15.872 -12.808 13.766 1.00 8.70 C
ATOM 25 P C A1554 -16.465 -8.323 17.634 1.00 0.01 P
ATOM 26 OP1 C A1554 -15.909 -7.109 18.258 1.00 0.01 O
ATOM 27 OP2 C A1554 -17.754 -8.862 18.155 1.00 0.01 O
ATOM 28 O5' C A1554 -16.552 -8.129 16.053 1.00 0.01 O
TER
ATOM 1 O3' G B1425 -25.303 -12.927 3.317 1.00 0.01 O
ATOM 2 P A B1426 -24.097 -13.671 2.567 1.00 0.01 P
ATOM 3 OP1 A B1426 -24.423 -13.706 1.140 1.00 0.01 O
ATOM 4 OP2 A B1426 -23.837 -14.964 3.274 1.00 0.01 O
ATOM 5 O5' A B1426 -22.914 -12.654 2.804 1.00 0.01 O
ATOM 6 C5' A B1426 -23.085 -11.289 2.449 1.00 0.01 C
ATOM 7 C4' A B1426 -21.850 -10.492 2.717 1.00 0.01 C
ATOM 8 O4' A B1426 -21.720 -10.287 4.138 1.00 0.01 O
ATOM 9 C3' A B1426 -20.558 -11.147 2.292 1.00 0.01 C
ATOM 10 O3' A B1426 -20.236 -10.847 0.947 1.00 0.01 O
ATOM 11 C2' A B1426 -19.551 -10.602 3.287 1.00 0.01 C
ATOM 12 O2' A B1426 -19.109 -9.319 2.879 1.00 0.01 O
ATOM 13 C1' A B1426 -20.394 -10.426 4.536 1.00 0.01 C
ATOM 14 N9 A B1426 -20.323 -11.562 5.446 1.00 0.01 N
ATOM 15 C8 A B1426 -21.106 -12.680 5.459 1.00 0.01 C
ATOM 16 N7 A B1426 -20.853 -13.485 6.466 1.00 0.01 N
ATOM 17 C5 A B1426 -19.852 -12.832 7.147 1.00 0.01 C
ATOM 18 C6 A B1426 -19.153 -13.161 8.284 1.00 0.01 C
ATOM 19 N6 A B1426 -19.368 -14.278 8.952 1.00 0.01 N
ATOM 20 N1 A B1426 -18.232 -12.312 8.725 1.00 0.01 N
ATOM 21 C2 A B1426 -18.025 -11.200 8.041 1.00 0.01 C
ATOM 22 N3 A B1426 -18.618 -10.761 6.936 1.00 0.01 N
ATOM 23 C4 A B1426 -19.533 -11.644 6.545 1.00 0.01 C
ATOM 24 P A B1427 -19.561 -11.959 0.012 1.00 15.24 P
ATOM 25 OP1 A B1427 -19.735 -11.515 -1.409 1.00 15.24 O
ATOM 26 OP2 A B1427 -20.093 -13.277 0.428 1.00 15.24 O
ATOM 27 O5' A B1427 -18.044 -11.860 0.419 1.00 15.24 O
TER
Atoms:
OP1: (-19.214,-12.032,20.278)
OP2: (-19.341,-13.850,18.459)
C3': (-15.520,-10.755,17.235)
C1': (-14.563,-12.480,15.928)
C5': (-16.023,-12.331,19.169)
O6: (-18.465,-14.184,11.737)
O4': (-14.721,-12.964,17.243)
C8: (-16.551,-13.992,15.471)
C2: (-15.701,-11.919,11.756)
C6: (-17.500,-13.540,12.155)
C5: (-16.966,-13.585,13.452)
C4: (-15.872,-12.808,13.766)
P: (-18.527,-13.031,19.409)
C4': (-15.037,-11.869,18.143)
C2': (-14.675,-10.957,15.988)
O2': (-13.373,-10.414,16.175)
N1: (-16.785,-12.657,11.348)
N2: (-15.144,-11.114,10.844)
N3: (-15.195,-11.956,12.978)
N7: (-17.384,-14.332,14.528)
N9: (-15.612,-13.071,15.081)
O5': (-17.332,-12.329,18.636)
O3': (-15.357,-9.477,17.820)
OP2: (-19.341,-13.850,18.459)
C3': (-15.520,-10.755,17.235)
C1': (-14.563,-12.480,15.928)
C5': (-16.023,-12.331,19.169)
O6: (-18.465,-14.184,11.737)
O4': (-14.721,-12.964,17.243)
C8: (-16.551,-13.992,15.471)
C2: (-15.701,-11.919,11.756)
C6: (-17.500,-13.540,12.155)
C5: (-16.966,-13.585,13.452)
C4: (-15.872,-12.808,13.766)
P: (-18.527,-13.031,19.409)
C4': (-15.037,-11.869,18.143)
C2': (-14.675,-10.957,15.988)
O2': (-13.373,-10.414,16.175)
N1: (-16.785,-12.657,11.348)
N2: (-15.144,-11.114,10.844)
N3: (-15.195,-11.956,12.978)
N7: (-17.384,-14.332,14.528)
N9: (-15.612,-13.071,15.081)
O5': (-17.332,-12.329,18.636)
O3': (-15.357,-9.477,17.820)
OP1: (-24.423,-13.706,1.140)
OP2: (-23.837,-14.964,3.274)
C3': (-20.558,-11.147,2.292)
C1': (-20.394,-10.426,4.536)
C5': (-23.085,-11.289,2.449)
O4': (-21.720,-10.287,4.138)
C8: (-21.106,-12.680,5.459)
O2': (-19.109,-9.319,2.879)
C6: (-19.153,-13.161,8.284)
C5: (-19.852,-12.832,7.147)
C4: (-19.533,-11.644,6.545)
P: (-24.097,-13.671,2.567)
C4': (-21.850,-10.492,2.717)
C2': (-19.551,-10.602,3.287)
C2: (-18.025,-11.200,8.041)
N1: (-18.232,-12.312,8.725)
N3: (-18.618,-10.761,6.936)
N6: (-19.368,-14.278,8.952)
N7: (-20.853,-13.485,6.466)
N9: (-20.323,-11.562,5.446)
O5': (-22.914,-12.654,2.804)
O3': (-20.236,-10.847,0.947)
OP2: (-23.837,-14.964,3.274)
C3': (-20.558,-11.147,2.292)
C1': (-20.394,-10.426,4.536)
C5': (-23.085,-11.289,2.449)
O4': (-21.720,-10.287,4.138)
C8: (-21.106,-12.680,5.459)
O2': (-19.109,-9.319,2.879)
C6: (-19.153,-13.161,8.284)
C5: (-19.852,-12.832,7.147)
C4: (-19.533,-11.644,6.545)
P: (-24.097,-13.671,2.567)
C4': (-21.850,-10.492,2.717)
C2': (-19.551,-10.602,3.287)
C2: (-18.025,-11.200,8.041)
N1: (-18.232,-12.312,8.725)
N3: (-18.618,-10.761,6.936)
N6: (-19.368,-14.278,8.952)
N7: (-20.853,-13.485,6.466)
N9: (-20.323,-11.562,5.446)
O5': (-22.914,-12.654,2.804)
O3': (-20.236,-10.847,0.947)
Image (generated by PyMOL):