Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
5MSF:R3:R13
Extra
PDB:
ATOM 1 O3' G A 2 -57.360 52.978 73.809 0.70 83.23 O
ATOM 2 P G A 3 -57.996 54.446 73.644 0.70 82.34 P
ATOM 3 OP1 G A 3 -58.121 55.076 74.980 0.70 85.53 O
ATOM 4 OP2 G A 3 -59.202 54.314 72.791 0.70 76.04 O
ATOM 5 O5' G A 3 -56.891 55.251 72.829 0.70 75.64 O
ATOM 6 C5' G A 3 -55.633 55.567 73.421 0.70 63.28 C
ATOM 7 C4' G A 3 -54.702 56.123 72.373 0.70 64.77 C
ATOM 8 O4' G A 3 -54.438 55.095 71.382 0.70 68.01 O
ATOM 9 C3' G A 3 -55.259 57.285 71.571 0.70 68.82 C
ATOM 10 O3' G A 3 -55.038 58.513 72.259 0.70 70.02 O
ATOM 11 C2' G A 3 -54.457 57.196 70.277 0.70 62.73 C
ATOM 12 O2' G A 3 -53.164 57.758 70.390 0.70 57.68 O
ATOM 13 C1' G A 3 -54.341 55.682 70.094 0.70 58.70 C
ATOM 14 N9 G A 3 -55.411 55.123 69.274 0.70 56.61 N
ATOM 15 C8 G A 3 -56.686 54.813 69.681 0.70 55.83 C
ATOM 16 N7 G A 3 -57.429 54.332 68.722 0.70 55.46 N
ATOM 17 C5 G A 3 -56.593 54.322 67.614 0.70 56.80 C
ATOM 18 C6 G A 3 -56.844 53.908 66.278 0.70 58.05 C
ATOM 19 O6 G A 3 -57.890 53.451 65.793 0.70 56.79 O
ATOM 20 N1 G A 3 -55.719 54.070 65.474 0.70 56.45 N
ATOM 21 C2 G A 3 -54.507 54.566 65.898 0.70 56.61 C
ATOM 22 N2 G A 3 -53.546 54.645 64.968 0.70 49.16 N
ATOM 23 N3 G A 3 -54.261 54.953 67.141 0.70 55.24 N
ATOM 24 C4 G A 3 -55.343 54.805 67.939 0.70 56.01 C
ATOM 25 P A A 4 -56.259 59.246 73.006 0.70 65.87 P
ATOM 26 OP1 A A 4 -56.119 59.013 74.470 0.70 53.92 O
ATOM 27 OP2 A A 4 -57.522 58.868 72.313 0.70 56.79 O
ATOM 28 O5' A A 4 -55.994 60.796 72.750 0.70 55.06 O
TER
ATOM 1 O3' C B 12 -59.300 52.603 54.324 0.70 77.65 O
ATOM 2 P A B 13 -58.513 51.290 54.821 0.70 80.32 P
ATOM 3 OP1 A B 13 -58.116 50.517 53.619 0.70 86.64 O
ATOM 4 OP2 A B 13 -59.343 50.644 55.869 0.70 76.86 O
ATOM 5 O5' A B 13 -57.195 51.856 55.520 0.70 81.60 O
ATOM 6 C5' A B 13 -56.175 52.475 54.743 0.70 77.85 C
ATOM 7 C4' A B 13 -55.074 53.020 55.629 0.70 79.40 C
ATOM 8 O4' A B 13 -55.622 54.054 56.495 0.70 80.83 O
ATOM 9 C3' A B 13 -54.437 52.037 56.603 0.70 82.15 C
ATOM 10 O3' A B 13 -53.431 51.227 56.010 0.70 87.38 O
ATOM 11 C2' A B 13 -53.866 52.969 57.663 0.70 80.59 C
ATOM 12 O2' A B 13 -52.660 53.589 57.262 0.70 75.31 O
ATOM 13 C1' A B 13 -54.968 54.018 57.755 0.70 75.65 C
ATOM 14 N9 A B 13 -55.931 53.644 58.787 0.70 65.37 N
ATOM 15 C8 A B 13 -57.134 52.991 58.663 0.70 56.85 C
ATOM 16 N7 A B 13 -57.749 52.796 59.805 0.70 57.62 N
ATOM 17 C5 A B 13 -56.895 53.360 60.745 0.70 60.87 C
ATOM 18 C6 A B 13 -56.970 53.485 62.145 0.70 57.86 C
ATOM 19 N6 A B 13 -57.994 53.034 62.875 0.70 49.53 N
ATOM 20 N1 A B 13 -55.943 54.099 62.777 0.70 58.72 N
ATOM 21 C2 A B 13 -54.917 54.555 62.043 0.70 58.74 C
ATOM 22 N3 A B 13 -54.734 54.501 60.726 0.70 59.73 N
ATOM 23 C4 A B 13 -55.772 53.884 60.129 0.70 62.22 C
ATOM 24 P C B 14 -53.044 49.818 56.687 0.70 88.31 P
ATOM 25 OP1 C B 14 -52.030 49.157 55.827 0.70 88.59 O
ATOM 26 OP2 C B 14 -54.304 49.105 57.020 0.70 88.01 O
ATOM 27 O5' C B 14 -52.343 50.226 58.056 0.70 77.33 O
TER
ATOM 2 P G A 3 -57.996 54.446 73.644 0.70 82.34 P
ATOM 3 OP1 G A 3 -58.121 55.076 74.980 0.70 85.53 O
ATOM 4 OP2 G A 3 -59.202 54.314 72.791 0.70 76.04 O
ATOM 5 O5' G A 3 -56.891 55.251 72.829 0.70 75.64 O
ATOM 6 C5' G A 3 -55.633 55.567 73.421 0.70 63.28 C
ATOM 7 C4' G A 3 -54.702 56.123 72.373 0.70 64.77 C
ATOM 8 O4' G A 3 -54.438 55.095 71.382 0.70 68.01 O
ATOM 9 C3' G A 3 -55.259 57.285 71.571 0.70 68.82 C
ATOM 10 O3' G A 3 -55.038 58.513 72.259 0.70 70.02 O
ATOM 11 C2' G A 3 -54.457 57.196 70.277 0.70 62.73 C
ATOM 12 O2' G A 3 -53.164 57.758 70.390 0.70 57.68 O
ATOM 13 C1' G A 3 -54.341 55.682 70.094 0.70 58.70 C
ATOM 14 N9 G A 3 -55.411 55.123 69.274 0.70 56.61 N
ATOM 15 C8 G A 3 -56.686 54.813 69.681 0.70 55.83 C
ATOM 16 N7 G A 3 -57.429 54.332 68.722 0.70 55.46 N
ATOM 17 C5 G A 3 -56.593 54.322 67.614 0.70 56.80 C
ATOM 18 C6 G A 3 -56.844 53.908 66.278 0.70 58.05 C
ATOM 19 O6 G A 3 -57.890 53.451 65.793 0.70 56.79 O
ATOM 20 N1 G A 3 -55.719 54.070 65.474 0.70 56.45 N
ATOM 21 C2 G A 3 -54.507 54.566 65.898 0.70 56.61 C
ATOM 22 N2 G A 3 -53.546 54.645 64.968 0.70 49.16 N
ATOM 23 N3 G A 3 -54.261 54.953 67.141 0.70 55.24 N
ATOM 24 C4 G A 3 -55.343 54.805 67.939 0.70 56.01 C
ATOM 25 P A A 4 -56.259 59.246 73.006 0.70 65.87 P
ATOM 26 OP1 A A 4 -56.119 59.013 74.470 0.70 53.92 O
ATOM 27 OP2 A A 4 -57.522 58.868 72.313 0.70 56.79 O
ATOM 28 O5' A A 4 -55.994 60.796 72.750 0.70 55.06 O
TER
ATOM 1 O3' C B 12 -59.300 52.603 54.324 0.70 77.65 O
ATOM 2 P A B 13 -58.513 51.290 54.821 0.70 80.32 P
ATOM 3 OP1 A B 13 -58.116 50.517 53.619 0.70 86.64 O
ATOM 4 OP2 A B 13 -59.343 50.644 55.869 0.70 76.86 O
ATOM 5 O5' A B 13 -57.195 51.856 55.520 0.70 81.60 O
ATOM 6 C5' A B 13 -56.175 52.475 54.743 0.70 77.85 C
ATOM 7 C4' A B 13 -55.074 53.020 55.629 0.70 79.40 C
ATOM 8 O4' A B 13 -55.622 54.054 56.495 0.70 80.83 O
ATOM 9 C3' A B 13 -54.437 52.037 56.603 0.70 82.15 C
ATOM 10 O3' A B 13 -53.431 51.227 56.010 0.70 87.38 O
ATOM 11 C2' A B 13 -53.866 52.969 57.663 0.70 80.59 C
ATOM 12 O2' A B 13 -52.660 53.589 57.262 0.70 75.31 O
ATOM 13 C1' A B 13 -54.968 54.018 57.755 0.70 75.65 C
ATOM 14 N9 A B 13 -55.931 53.644 58.787 0.70 65.37 N
ATOM 15 C8 A B 13 -57.134 52.991 58.663 0.70 56.85 C
ATOM 16 N7 A B 13 -57.749 52.796 59.805 0.70 57.62 N
ATOM 17 C5 A B 13 -56.895 53.360 60.745 0.70 60.87 C
ATOM 18 C6 A B 13 -56.970 53.485 62.145 0.70 57.86 C
ATOM 19 N6 A B 13 -57.994 53.034 62.875 0.70 49.53 N
ATOM 20 N1 A B 13 -55.943 54.099 62.777 0.70 58.72 N
ATOM 21 C2 A B 13 -54.917 54.555 62.043 0.70 58.74 C
ATOM 22 N3 A B 13 -54.734 54.501 60.726 0.70 59.73 N
ATOM 23 C4 A B 13 -55.772 53.884 60.129 0.70 62.22 C
ATOM 24 P C B 14 -53.044 49.818 56.687 0.70 88.31 P
ATOM 25 OP1 C B 14 -52.030 49.157 55.827 0.70 88.59 O
ATOM 26 OP2 C B 14 -54.304 49.105 57.020 0.70 88.01 O
ATOM 27 O5' C B 14 -52.343 50.226 58.056 0.70 77.33 O
TER
Atoms:
OP1: (-58.121,55.076,74.980)
OP2: (-59.202,54.314,72.791)
C3': (-55.259,57.285,71.571)
C1': (-54.341,55.682,70.094)
C5': (-55.633,55.567,73.421)
O6: (-57.890,53.451,65.793)
O4': (-54.438,55.095,71.382)
C8: (-56.686,54.813,69.681)
C2: (-54.507,54.566,65.898)
C6: (-56.844,53.908,66.278)
C5: (-56.593,54.322,67.614)
C4: (-55.343,54.805,67.939)
P: (-57.996,54.446,73.644)
C4': (-54.702,56.123,72.373)
C2': (-54.457,57.196,70.277)
O2': (-53.164,57.758,70.390)
N1: (-55.719,54.070,65.474)
N2: (-53.546,54.645,64.968)
N3: (-54.261,54.953,67.141)
N7: (-57.429,54.332,68.722)
N9: (-55.411,55.123,69.274)
O5': (-56.891,55.251,72.829)
O3': (-55.038,58.513,72.259)
OP2: (-59.202,54.314,72.791)
C3': (-55.259,57.285,71.571)
C1': (-54.341,55.682,70.094)
C5': (-55.633,55.567,73.421)
O6: (-57.890,53.451,65.793)
O4': (-54.438,55.095,71.382)
C8: (-56.686,54.813,69.681)
C2: (-54.507,54.566,65.898)
C6: (-56.844,53.908,66.278)
C5: (-56.593,54.322,67.614)
C4: (-55.343,54.805,67.939)
P: (-57.996,54.446,73.644)
C4': (-54.702,56.123,72.373)
C2': (-54.457,57.196,70.277)
O2': (-53.164,57.758,70.390)
N1: (-55.719,54.070,65.474)
N2: (-53.546,54.645,64.968)
N3: (-54.261,54.953,67.141)
N7: (-57.429,54.332,68.722)
N9: (-55.411,55.123,69.274)
O5': (-56.891,55.251,72.829)
O3': (-55.038,58.513,72.259)
OP1: (-58.116,50.517,53.619)
OP2: (-59.343,50.644,55.869)
C3': (-54.437,52.037,56.603)
C1': (-54.968,54.018,57.755)
C5': (-56.175,52.475,54.743)
O4': (-55.622,54.054,56.495)
C8: (-57.134,52.991,58.663)
O2': (-52.660,53.589,57.262)
C6: (-56.970,53.485,62.145)
C5: (-56.895,53.360,60.745)
C4: (-55.772,53.884,60.129)
P: (-58.513,51.290,54.821)
C4': (-55.074,53.020,55.629)
C2': (-53.866,52.969,57.663)
C2: (-54.917,54.555,62.043)
N1: (-55.943,54.099,62.777)
N3: (-54.734,54.501,60.726)
N6: (-57.994,53.034,62.875)
N7: (-57.749,52.796,59.805)
N9: (-55.931,53.644,58.787)
O5': (-57.195,51.856,55.520)
O3': (-53.431,51.227,56.010)
OP2: (-59.343,50.644,55.869)
C3': (-54.437,52.037,56.603)
C1': (-54.968,54.018,57.755)
C5': (-56.175,52.475,54.743)
O4': (-55.622,54.054,56.495)
C8: (-57.134,52.991,58.663)
O2': (-52.660,53.589,57.262)
C6: (-56.970,53.485,62.145)
C5: (-56.895,53.360,60.745)
C4: (-55.772,53.884,60.129)
P: (-58.513,51.290,54.821)
C4': (-55.074,53.020,55.629)
C2': (-53.866,52.969,57.663)
C2: (-54.917,54.555,62.043)
N1: (-55.943,54.099,62.777)
N3: (-54.734,54.501,60.726)
N6: (-57.994,53.034,62.875)
N7: (-57.749,52.796,59.805)
N9: (-55.931,53.644,58.787)
O5': (-57.195,51.856,55.520)
O3': (-53.431,51.227,56.010)
Image (generated by PyMOL):