ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3HHN:C103:C118

Extra

PDB:
ATOM 1 O3' G A 102 -14.464 17.596 5.014 1.00 75.78 O
ATOM 2 P G A 103 -15.062 16.240 4.413 1.00 77.72 P
ATOM 3 OP1 G A 103 -15.535 16.535 3.042 1.00 64.54 O
ATOM 4 OP2 G A 103 -15.989 15.651 5.406 1.00 65.90 O
ATOM 5 O5' G A 103 -13.759 15.320 4.311 1.00 67.71 O
ATOM 6 C5' G A 103 -12.699 15.711 3.452 1.00 67.40 C
ATOM 7 C4' G A 103 -11.361 15.363 4.072 1.00 73.95 C
ATOM 8 O4' G A 103 -11.196 16.117 5.300 1.00 75.99 O
ATOM 9 C3' G A 103 -11.194 13.916 4.512 1.00 77.79 C
ATOM 10 O3' G A 103 -10.858 13.080 3.406 1.00 87.60 O
ATOM 11 C2' G A 103 -10.042 14.067 5.500 1.00 67.02 C
ATOM 12 O2' G A 103 -8.793 14.241 4.862 1.00 70.63 O
ATOM 13 C1' G A 103 -10.453 15.345 6.224 1.00 65.43 C
ATOM 14 N9 G A 103 -11.290 15.053 7.380 1.00 55.62 N
ATOM 15 C8 G A 103 -12.660 14.963 7.421 1.00 55.81 C
ATOM 16 N7 G A 103 -13.123 14.673 8.607 1.00 51.06 N
ATOM 17 C5 G A 103 -11.986 14.558 9.398 1.00 45.43 C
ATOM 18 C6 G A 103 -11.856 14.259 10.773 1.00 46.70 C
ATOM 19 O6 G A 103 -12.749 14.025 11.597 1.00 55.23 O
ATOM 20 N1 G A 103 -10.524 14.243 11.174 1.00 46.30 N
ATOM 21 C2 G A 103 -9.452 14.487 10.349 1.00 45.92 C
ATOM 22 N2 G A 103 -8.242 14.427 10.919 1.00 49.88 N
ATOM 23 N3 G A 103 -9.557 14.771 9.058 1.00 45.67 N
ATOM 24 C4 G A 103 -10.850 14.788 8.655 1.00 52.00 C
ATOM 25 P U A 104 -10.788 11.488 3.580 1.00 98.69 P
ATOM 26 OP1 U A 104 -10.525 10.902 2.246 1.00 97.35 O
ATOM 27 OP2 U A 104 -11.936 11.015 4.386 1.00 56.42 O
ATOM 28 O5' U A 104 -9.473 11.316 4.461 1.00 69.25 O
TER

ATOM 1 O3' A B 117 -9.256 10.382 21.793 1.00 79.95 O
ATOM 2 P A B 118 -9.199 11.944 22.133 1.00 96.01 P
ATOM 3 OP1 A B 118 -8.785 12.092 23.546 1.00 81.15 O
ATOM 4 OP2 A B 118 -10.465 12.558 21.671 1.00 77.61 O
ATOM 5 O5' A B 118 -8.001 12.451 21.199 1.00 81.23 O
ATOM 6 C5' A B 118 -6.740 11.792 21.240 1.00 70.06 C
ATOM 7 C4' A B 118 -6.006 11.935 19.918 1.00 69.70 C
ATOM 8 O4' A B 118 -6.675 11.150 18.898 1.00 69.45 O
ATOM 9 C3' A B 118 -5.974 13.342 19.341 1.00 69.28 C
ATOM 10 O3' A B 118 -4.917 14.107 19.900 1.00 63.29 O
ATOM 11 C2' A B 118 -5.728 13.040 17.869 1.00 67.92 C
ATOM 12 O2' A B 118 -4.390 12.660 17.619 1.00 62.22 O
ATOM 13 C1' A B 118 -6.662 11.852 17.667 1.00 66.94 C
ATOM 14 N9 A B 118 -8.034 12.228 17.321 1.00 65.99 N
ATOM 15 C8 A B 118 -9.092 12.367 18.177 1.00 65.20 C
ATOM 16 N7 A B 118 -10.214 12.712 17.589 1.00 60.24 N
ATOM 17 C5 A B 118 -9.870 12.810 16.252 1.00 53.82 C
ATOM 18 C6 A B 118 -10.614 13.141 15.103 1.00 59.34 C
ATOM 19 N6 A B 118 -11.916 13.448 15.128 1.00 57.68 N
ATOM 20 N1 A B 118 -9.967 13.147 13.920 1.00 57.69 N
ATOM 21 C2 A B 118 -8.667 12.839 13.898 1.00 55.25 C
ATOM 22 N3 A B 118 -7.864 12.511 14.908 1.00 59.04 N
ATOM 23 C4 A B 118 -8.532 12.516 16.070 1.00 55.76 C
ATOM 24 P C B 119 -5.148 15.671 20.152 1.00 94.98 P
ATOM 25 OP1 C B 119 -3.974 16.197 20.886 1.00 69.42 O
ATOM 26 OP2 C B 119 -6.504 15.836 20.723 1.00 82.14 O
ATOM 27 O5' C B 119 -5.125 16.279 18.669 1.00 69.23 O
TER

Atoms:
OP1: (-15.535,16.535,3.042)
OP2: (-15.989,15.651,5.406)
C3': (-11.194,13.916,4.512)
C1': (-10.453,15.345,6.224)
C5': (-12.699,15.711,3.452)
O6: (-12.749,14.025,11.597)
O4': (-11.196,16.117,5.300)
C8: (-12.660,14.963,7.421)
C2: (-9.452,14.487,10.349)
C6: (-11.856,14.259,10.773)
C5: (-11.986,14.558,9.398)
C4: (-10.850,14.788,8.655)
P: (-15.062,16.240,4.413)
C4': (-11.361,15.363,4.072)
C2': (-10.042,14.067,5.500)
O2': (-8.793,14.241,4.862)
N1: (-10.524,14.243,11.174)
N2: (-8.242,14.427,10.919)
N3: (-9.557,14.771,9.058)
N7: (-13.123,14.673,8.607)
N9: (-11.290,15.053,7.380)
O5': (-13.759,15.320,4.311)
O3': (-10.858,13.080,3.406)
OP1: (-8.785,12.092,23.546)
OP2: (-10.465,12.558,21.671)
C3': (-5.974,13.342,19.341)
C1': (-6.662,11.852,17.667)
C5': (-6.740,11.792,21.240)
O4': (-6.675,11.150,18.898)
C8: (-9.092,12.367,18.177)
O2': (-4.390,12.660,17.619)
C6: (-10.614,13.141,15.103)
C5: (-9.870,12.810,16.252)
C4: (-8.532,12.516,16.070)
P: (-9.199,11.944,22.133)
C4': (-6.006,11.935,19.918)
C2': (-5.728,13.040,17.869)
C2: (-8.667,12.839,13.898)
N1: (-9.967,13.147,13.920)
N3: (-7.864,12.511,14.908)
N6: (-11.916,13.448,15.128)
N7: (-10.214,12.712,17.589)
N9: (-8.034,12.228,17.321)
O5': (-8.001,12.451,21.199)
O3': (-4.917,14.107,19.900)
Image (generated by PyMOL):
PyMOL image
show in jmol