ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2UXC:A917:A1212

Extra

PDB:
ATOM 1 O3' G A 916 232.015 111.847 -10.451 1.00 50.26 O
ATOM 2 P G A 917 233.375 111.694 -9.604 1.00 50.45 P
ATOM 3 OP1 G A 917 233.414 110.418 -8.812 1.00 57.15 O
ATOM 4 OP2 G A 917 233.579 112.995 -8.898 1.00 57.15 O
ATOM 5 O5' G A 917 234.487 111.596 -10.733 1.00 50.45 O
ATOM 6 C5' G A 917 234.554 110.458 -11.603 1.00 50.45 C
ATOM 7 C4' G A 917 235.878 110.435 -12.305 1.00 50.45 C
ATOM 8 O4' G A 917 235.942 111.572 -13.201 1.00 50.45 O
ATOM 9 C3' G A 917 237.090 110.589 -11.401 1.00 50.45 C
ATOM 10 O3' G A 917 237.498 109.349 -10.847 1.00 50.45 O
ATOM 11 C2' G A 917 238.130 111.164 -12.341 1.00 50.45 C
ATOM 12 O2' G A 917 238.715 110.145 -13.113 1.00 50.45 O
ATOM 13 C1' G A 917 237.272 112.059 -13.245 1.00 50.45 C
ATOM 14 N9 G A 917 237.260 113.479 -12.889 1.00 57.15 N
ATOM 15 C8 G A 917 236.201 114.351 -12.992 1.00 57.15 C
ATOM 16 N7 G A 917 236.502 115.570 -12.629 1.00 57.15 N
ATOM 17 C5 G A 917 237.837 115.497 -12.259 1.00 57.15 C
ATOM 18 C6 G A 917 238.709 116.500 -11.785 1.00 57.15 C
ATOM 19 O6 G A 917 238.474 117.694 -11.614 1.00 57.15 O
ATOM 20 N1 G A 917 239.978 115.994 -11.510 1.00 57.15 N
ATOM 21 C2 G A 917 240.362 114.688 -11.679 1.00 57.15 C
ATOM 22 N2 G A 917 241.630 114.390 -11.354 1.00 57.15 N
ATOM 23 N3 G A 917 239.557 113.741 -12.134 1.00 57.15 N
ATOM 24 C4 G A 917 238.317 114.213 -12.401 1.00 57.15 C
ATOM 25 P A A 918 237.907 109.278 -9.291 1.00 56.23 P
ATOM 26 OP1 A A 918 238.298 107.887 -8.907 1.00 52.92 O
ATOM 27 OP2 A A 918 236.836 109.963 -8.521 1.00 52.92 O
ATOM 28 O5' A A 918 239.187 110.222 -9.244 1.00 56.23 O
TER

ATOM 1 O3' U B1211 244.284 125.149 -3.048 1.00 55.71 O
ATOM 2 P A B1212 244.423 125.990 -4.408 1.00 58.48 P
ATOM 3 OP1 A B1212 245.679 126.764 -4.259 1.00 59.35 O
ATOM 4 OP2 A B1212 243.147 126.714 -4.649 1.00 59.35 O
ATOM 5 O5' A B1212 244.632 124.895 -5.554 1.00 58.48 O
ATOM 6 C5' A B1212 245.898 124.242 -5.692 1.00 58.48 C
ATOM 7 C4' A B1212 245.824 123.005 -6.582 1.00 58.48 C
ATOM 8 O4' A B1212 244.634 122.208 -6.338 1.00 58.48 O
ATOM 9 C3' A B1212 245.836 123.091 -8.105 1.00 58.48 C
ATOM 10 O3' A B1212 247.119 123.415 -8.650 1.00 58.48 O
ATOM 11 C2' A B1212 245.514 121.641 -8.465 1.00 58.48 C
ATOM 12 O2' A B1212 246.639 120.799 -8.314 1.00 58.48 O
ATOM 13 C1' A B1212 244.521 121.244 -7.373 1.00 58.48 C
ATOM 14 N9 A B1212 243.157 121.205 -7.910 1.00 59.35 N
ATOM 15 C8 A B1212 242.173 122.160 -7.898 1.00 59.35 C
ATOM 16 N7 A B1212 241.096 121.818 -8.564 1.00 59.35 N
ATOM 17 C5 A B1212 241.384 120.543 -9.031 1.00 59.35 C
ATOM 18 C6 A B1212 240.659 119.637 -9.819 1.00 59.35 C
ATOM 19 N6 A B1212 239.453 119.896 -10.326 1.00 59.35 N
ATOM 20 N1 A B1212 241.228 118.444 -10.085 1.00 59.35 N
ATOM 21 C2 A B1212 242.445 118.195 -9.611 1.00 59.35 C
ATOM 22 N3 A B1212 243.233 118.965 -8.879 1.00 59.35 N
ATOM 23 C4 A B1212 242.637 120.143 -8.617 1.00 59.35 C
ATOM 24 P C B1213 247.220 124.261 -10.022 1.00 68.00 P
ATOM 25 OP1 C B1213 248.433 125.105 -9.924 1.00 51.61 O
ATOM 26 OP2 C B1213 245.923 124.903 -10.319 1.00 51.61 O
ATOM 27 O5' C B1213 247.471 123.154 -11.139 1.00 68.00 O
TER

Atoms:
OP1: (233.414,110.418,-8.812)
OP2: (233.579,112.995,-8.898)
C3': (237.090,110.589,-11.401)
C1': (237.272,112.059,-13.245)
C5': (234.554,110.458,-11.603)
O6: (238.474,117.694,-11.614)
O4': (235.942,111.572,-13.201)
C8: (236.201,114.351,-12.992)
C2: (240.362,114.688,-11.679)
C6: (238.709,116.500,-11.785)
C5: (237.837,115.497,-12.259)
C4: (238.317,114.213,-12.401)
P: (233.375,111.694,-9.604)
C4': (235.878,110.435,-12.305)
C2': (238.130,111.164,-12.341)
O2': (238.715,110.145,-13.113)
N1: (239.978,115.994,-11.510)
N2: (241.630,114.390,-11.354)
N3: (239.557,113.741,-12.134)
N7: (236.502,115.570,-12.629)
N9: (237.260,113.479,-12.889)
O5': (234.487,111.596,-10.733)
O3': (237.498,109.349,-10.847)
OP1: (245.679,126.764,-4.259)
OP2: (243.147,126.714,-4.649)
C3': (245.836,123.091,-8.105)
C1': (244.521,121.244,-7.373)
C5': (245.898,124.242,-5.692)
O4': (244.634,122.208,-6.338)
C8: (242.173,122.160,-7.898)
O2': (246.639,120.799,-8.314)
C6: (240.659,119.637,-9.819)
C5: (241.384,120.543,-9.031)
C4: (242.637,120.143,-8.617)
P: (244.423,125.990,-4.408)
C4': (245.824,123.005,-6.582)
C2': (245.514,121.641,-8.465)
C2: (242.445,118.195,-9.611)
N1: (241.228,118.444,-10.085)
N3: (243.233,118.965,-8.879)
N6: (239.453,119.896,-10.326)
N7: (241.096,121.818,-8.564)
N9: (243.157,121.205,-7.910)
O5': (244.632,124.895,-5.554)
O3': (247.119,123.415,-8.650)
Image (generated by PyMOL):
PyMOL image
show in jmol