Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:061:096
Extra
PDB:
ATOM 1 O3' A A 60 47.185 158.229 32.108 1.00 54.83 O
ATOM 2 P G A 61 46.713 158.450 30.591 1.00 57.62 P
ATOM 3 OP1 G A 61 46.127 159.817 30.464 1.00 56.01 O
ATOM 4 OP2 G A 61 45.907 157.258 30.195 1.00 57.38 O
ATOM 5 O5' G A 61 48.083 158.420 29.788 1.00 54.97 O
ATOM 6 C5' G A 61 48.176 158.952 28.468 1.00 53.06 C
ATOM 7 C4' G A 61 49.322 159.919 28.398 1.00 52.16 C
ATOM 8 O4' G A 61 50.431 159.404 29.178 1.00 49.38 O
ATOM 9 C3' G A 61 49.873 160.168 27.004 1.00 52.60 C
ATOM 10 O3' G A 61 49.136 161.196 26.326 1.00 53.34 O
ATOM 11 C2' G A 61 51.326 160.517 27.303 1.00 51.00 C
ATOM 12 O2' G A 61 51.458 161.831 27.809 1.00 52.59 O
ATOM 13 C1' G A 61 51.631 159.549 28.450 1.00 48.19 C
ATOM 14 N9 G A 61 52.061 158.212 28.049 1.00 45.44 N
ATOM 15 C8 G A 61 51.374 157.037 28.245 1.00 44.92 C
ATOM 16 N7 G A 61 52.011 155.989 27.802 1.00 44.09 N
ATOM 17 C5 G A 61 53.190 156.499 27.279 1.00 44.25 C
ATOM 18 C6 G A 61 54.284 155.838 26.667 1.00 44.64 C
ATOM 19 O6 G A 61 54.440 154.628 26.463 1.00 45.98 O
ATOM 20 N1 G A 61 55.269 156.734 26.280 1.00 44.97 N
ATOM 21 C2 G A 61 55.215 158.090 26.459 1.00 46.19 C
ATOM 22 N2 G A 61 56.263 158.785 26.000 1.00 47.62 N
ATOM 23 N3 G A 61 54.207 158.721 27.040 1.00 45.97 N
ATOM 24 C4 G A 61 53.235 157.870 27.420 1.00 44.71 C
ATOM 25 P C A 62 48.581 160.939 24.829 1.00 54.60 P
ATOM 26 OP1 C A 62 47.672 162.061 24.498 1.00 53.69 O
ATOM 27 OP2 C A 62 48.092 159.545 24.700 1.00 53.95 O
ATOM 28 O5' C A 62 49.877 161.065 23.915 1.00 53.75 O
TER
ATOM 1 O3' G B 95 59.390 151.757 15.753 1.00 51.62 O
ATOM 2 P A B 96 60.457 152.272 16.846 1.00 52.74 P
ATOM 3 OP1 A B 96 61.709 152.583 16.109 1.00 52.26 O
ATOM 4 OP2 A B 96 60.495 151.305 17.977 1.00 52.34 O
ATOM 5 O5' A B 96 59.844 153.646 17.375 1.00 47.96 O
ATOM 6 C5' A B 96 59.812 154.794 16.522 1.00 46.94 C
ATOM 7 C4' A B 96 59.545 156.047 17.317 1.00 47.85 C
ATOM 8 O4' A B 96 58.177 156.068 17.793 1.00 49.10 O
ATOM 9 C3' A B 96 60.372 156.246 18.571 1.00 47.25 C
ATOM 10 O3' A B 96 61.665 156.738 18.269 1.00 48.54 O
ATOM 11 C2' A B 96 59.534 157.259 19.334 1.00 46.36 C
ATOM 12 O2' A B 96 59.671 158.561 18.814 1.00 45.18 O
ATOM 13 C1' A B 96 58.122 156.757 19.034 1.00 47.93 C
ATOM 14 N9 A B 96 57.653 155.822 20.053 1.00 48.67 N
ATOM 15 C8 A B 96 57.630 154.451 19.995 1.00 48.65 C
ATOM 16 N7 A B 96 57.157 153.887 21.076 1.00 49.90 N
ATOM 17 C5 A B 96 56.848 154.958 21.903 1.00 49.51 C
ATOM 18 C6 A B 96 56.311 155.028 23.199 1.00 49.36 C
ATOM 19 N6 A B 96 55.968 153.957 23.917 1.00 49.32 N
ATOM 20 N1 A B 96 56.132 156.252 23.738 1.00 49.46 N
ATOM 21 C2 A B 96 56.470 157.324 23.015 1.00 49.49 C
ATOM 22 N3 A B 96 56.980 157.386 21.789 1.00 49.51 N
ATOM 23 C4 A B 96 57.148 156.154 21.283 1.00 48.70 C
ATOM 24 P U B 97 62.908 156.301 19.181 1.00 49.93 P
ATOM 25 OP1 U B 97 64.124 156.877 18.562 1.00 51.66 O
ATOM 26 OP2 U B 97 62.829 154.836 19.397 1.00 51.31 O
ATOM 27 O5' U B 97 62.630 157.036 20.570 1.00 48.59 O
TER
ATOM 2 P G A 61 46.713 158.450 30.591 1.00 57.62 P
ATOM 3 OP1 G A 61 46.127 159.817 30.464 1.00 56.01 O
ATOM 4 OP2 G A 61 45.907 157.258 30.195 1.00 57.38 O
ATOM 5 O5' G A 61 48.083 158.420 29.788 1.00 54.97 O
ATOM 6 C5' G A 61 48.176 158.952 28.468 1.00 53.06 C
ATOM 7 C4' G A 61 49.322 159.919 28.398 1.00 52.16 C
ATOM 8 O4' G A 61 50.431 159.404 29.178 1.00 49.38 O
ATOM 9 C3' G A 61 49.873 160.168 27.004 1.00 52.60 C
ATOM 10 O3' G A 61 49.136 161.196 26.326 1.00 53.34 O
ATOM 11 C2' G A 61 51.326 160.517 27.303 1.00 51.00 C
ATOM 12 O2' G A 61 51.458 161.831 27.809 1.00 52.59 O
ATOM 13 C1' G A 61 51.631 159.549 28.450 1.00 48.19 C
ATOM 14 N9 G A 61 52.061 158.212 28.049 1.00 45.44 N
ATOM 15 C8 G A 61 51.374 157.037 28.245 1.00 44.92 C
ATOM 16 N7 G A 61 52.011 155.989 27.802 1.00 44.09 N
ATOM 17 C5 G A 61 53.190 156.499 27.279 1.00 44.25 C
ATOM 18 C6 G A 61 54.284 155.838 26.667 1.00 44.64 C
ATOM 19 O6 G A 61 54.440 154.628 26.463 1.00 45.98 O
ATOM 20 N1 G A 61 55.269 156.734 26.280 1.00 44.97 N
ATOM 21 C2 G A 61 55.215 158.090 26.459 1.00 46.19 C
ATOM 22 N2 G A 61 56.263 158.785 26.000 1.00 47.62 N
ATOM 23 N3 G A 61 54.207 158.721 27.040 1.00 45.97 N
ATOM 24 C4 G A 61 53.235 157.870 27.420 1.00 44.71 C
ATOM 25 P C A 62 48.581 160.939 24.829 1.00 54.60 P
ATOM 26 OP1 C A 62 47.672 162.061 24.498 1.00 53.69 O
ATOM 27 OP2 C A 62 48.092 159.545 24.700 1.00 53.95 O
ATOM 28 O5' C A 62 49.877 161.065 23.915 1.00 53.75 O
TER
ATOM 1 O3' G B 95 59.390 151.757 15.753 1.00 51.62 O
ATOM 2 P A B 96 60.457 152.272 16.846 1.00 52.74 P
ATOM 3 OP1 A B 96 61.709 152.583 16.109 1.00 52.26 O
ATOM 4 OP2 A B 96 60.495 151.305 17.977 1.00 52.34 O
ATOM 5 O5' A B 96 59.844 153.646 17.375 1.00 47.96 O
ATOM 6 C5' A B 96 59.812 154.794 16.522 1.00 46.94 C
ATOM 7 C4' A B 96 59.545 156.047 17.317 1.00 47.85 C
ATOM 8 O4' A B 96 58.177 156.068 17.793 1.00 49.10 O
ATOM 9 C3' A B 96 60.372 156.246 18.571 1.00 47.25 C
ATOM 10 O3' A B 96 61.665 156.738 18.269 1.00 48.54 O
ATOM 11 C2' A B 96 59.534 157.259 19.334 1.00 46.36 C
ATOM 12 O2' A B 96 59.671 158.561 18.814 1.00 45.18 O
ATOM 13 C1' A B 96 58.122 156.757 19.034 1.00 47.93 C
ATOM 14 N9 A B 96 57.653 155.822 20.053 1.00 48.67 N
ATOM 15 C8 A B 96 57.630 154.451 19.995 1.00 48.65 C
ATOM 16 N7 A B 96 57.157 153.887 21.076 1.00 49.90 N
ATOM 17 C5 A B 96 56.848 154.958 21.903 1.00 49.51 C
ATOM 18 C6 A B 96 56.311 155.028 23.199 1.00 49.36 C
ATOM 19 N6 A B 96 55.968 153.957 23.917 1.00 49.32 N
ATOM 20 N1 A B 96 56.132 156.252 23.738 1.00 49.46 N
ATOM 21 C2 A B 96 56.470 157.324 23.015 1.00 49.49 C
ATOM 22 N3 A B 96 56.980 157.386 21.789 1.00 49.51 N
ATOM 23 C4 A B 96 57.148 156.154 21.283 1.00 48.70 C
ATOM 24 P U B 97 62.908 156.301 19.181 1.00 49.93 P
ATOM 25 OP1 U B 97 64.124 156.877 18.562 1.00 51.66 O
ATOM 26 OP2 U B 97 62.829 154.836 19.397 1.00 51.31 O
ATOM 27 O5' U B 97 62.630 157.036 20.570 1.00 48.59 O
TER
Atoms:
OP1: (46.127,159.817,30.464)
OP2: (45.907,157.258,30.195)
C3': (49.873,160.168,27.004)
C1': (51.631,159.549,28.450)
C5': (48.176,158.952,28.468)
O6: (54.440,154.628,26.463)
O4': (50.431,159.404,29.178)
C8: (51.374,157.037,28.245)
C2: (55.215,158.090,26.459)
C6: (54.284,155.838,26.667)
C5: (53.190,156.499,27.279)
C4: (53.235,157.870,27.420)
P: (46.713,158.450,30.591)
C4': (49.322,159.919,28.398)
C2': (51.326,160.517,27.303)
O2': (51.458,161.831,27.809)
N1: (55.269,156.734,26.280)
N2: (56.263,158.785,26.000)
N3: (54.207,158.721,27.040)
N7: (52.011,155.989,27.802)
N9: (52.061,158.212,28.049)
O5': (48.083,158.420,29.788)
O3': (49.136,161.196,26.326)
OP2: (45.907,157.258,30.195)
C3': (49.873,160.168,27.004)
C1': (51.631,159.549,28.450)
C5': (48.176,158.952,28.468)
O6: (54.440,154.628,26.463)
O4': (50.431,159.404,29.178)
C8: (51.374,157.037,28.245)
C2: (55.215,158.090,26.459)
C6: (54.284,155.838,26.667)
C5: (53.190,156.499,27.279)
C4: (53.235,157.870,27.420)
P: (46.713,158.450,30.591)
C4': (49.322,159.919,28.398)
C2': (51.326,160.517,27.303)
O2': (51.458,161.831,27.809)
N1: (55.269,156.734,26.280)
N2: (56.263,158.785,26.000)
N3: (54.207,158.721,27.040)
N7: (52.011,155.989,27.802)
N9: (52.061,158.212,28.049)
O5': (48.083,158.420,29.788)
O3': (49.136,161.196,26.326)
OP1: (61.709,152.583,16.109)
OP2: (60.495,151.305,17.977)
C3': (60.372,156.246,18.571)
C1': (58.122,156.757,19.034)
C5': (59.812,154.794,16.522)
O4': (58.177,156.068,17.793)
C8: (57.630,154.451,19.995)
O2': (59.671,158.561,18.814)
C6: (56.311,155.028,23.199)
C5: (56.848,154.958,21.903)
C4: (57.148,156.154,21.283)
P: (60.457,152.272,16.846)
C4': (59.545,156.047,17.317)
C2': (59.534,157.259,19.334)
C2: (56.470,157.324,23.015)
N1: (56.132,156.252,23.738)
N3: (56.980,157.386,21.789)
N6: (55.968,153.957,23.917)
N7: (57.157,153.887,21.076)
N9: (57.653,155.822,20.053)
O5': (59.844,153.646,17.375)
O3': (61.665,156.738,18.269)
OP2: (60.495,151.305,17.977)
C3': (60.372,156.246,18.571)
C1': (58.122,156.757,19.034)
C5': (59.812,154.794,16.522)
O4': (58.177,156.068,17.793)
C8: (57.630,154.451,19.995)
O2': (59.671,158.561,18.814)
C6: (56.311,155.028,23.199)
C5: (56.848,154.958,21.903)
C4: (57.148,156.154,21.283)
P: (60.457,152.272,16.846)
C4': (59.545,156.047,17.317)
C2': (59.534,157.259,19.334)
C2: (56.470,157.324,23.015)
N1: (56.132,156.252,23.738)
N3: (56.980,157.386,21.789)
N6: (55.968,153.957,23.917)
N7: (57.157,153.887,21.076)
N9: (57.653,155.822,20.053)
O5': (59.844,153.646,17.375)
O3': (61.665,156.738,18.269)
Image (generated by PyMOL):