ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ASY:S25:S43

Extra

PDB:
ATOM 1 O3' U A 24 29.330 56.933 -14.280 1.00 37.56 O
ATOM 2 P G A 25 29.183 58.322 -15.073 1.00 40.40 P
ATOM 3 OP1 G A 25 29.540 59.345 -14.039 1.00 43.97 O
ATOM 4 OP2 G A 25 27.732 58.410 -15.452 1.00 45.50 O
ATOM 5 O5' G A 25 30.066 58.497 -16.391 1.00 35.14 O
ATOM 6 C5' G A 25 31.453 58.877 -16.287 1.00 28.82 C
ATOM 7 C4' G A 25 32.147 58.833 -17.622 1.00 26.97 C
ATOM 8 O4' G A 25 31.937 57.562 -18.294 1.00 29.64 O
ATOM 9 C3' G A 25 31.495 59.827 -18.570 1.00 29.51 C
ATOM 10 O3' G A 25 32.063 61.128 -18.406 1.00 33.29 O
ATOM 11 C2' G A 25 31.832 59.257 -19.939 1.00 28.08 C
ATOM 12 O2' G A 25 33.135 59.637 -20.309 1.00 24.83 O
ATOM 13 C1' G A 25 31.727 57.766 -19.698 1.00 30.16 C
ATOM 14 N9 G A 25 30.402 57.299 -20.120 1.00 33.05 N
ATOM 15 C8 G A 25 29.330 56.933 -19.336 1.00 35.93 C
ATOM 16 N7 G A 25 28.279 56.553 -20.025 1.00 37.20 N
ATOM 17 C5 G A 25 28.678 56.670 -21.352 1.00 33.05 C
ATOM 18 C6 G A 25 27.963 56.407 -22.540 1.00 36.12 C
ATOM 19 O6 G A 25 26.807 55.998 -22.669 1.00 40.83 O
ATOM 20 N1 G A 25 28.720 56.641 -23.651 1.00 35.63 N
ATOM 21 C2 G A 25 30.003 57.094 -23.643 1.00 32.68 C
ATOM 22 N2 G A 25 30.570 57.269 -24.840 1.00 34.23 N
ATOM 23 N3 G A 25 30.696 57.357 -22.532 1.00 32.00 N
ATOM 24 C4 G A 25 29.982 57.123 -21.421 1.00 31.41 C
ATOM 25 P G A 26 31.033 62.356 -18.242 1.00 33.02 P
ATOM 26 OP1 G A 26 31.264 63.759 -17.803 1.00 36.10 O
ATOM 27 OP2 G A 26 30.087 61.640 -17.329 1.00 34.07 O
ATOM 28 O5' G A 26 30.591 62.327 -19.793 1.00 20.29 O
TER

ATOM 1 O3' C B 42 20.142 57.869 -31.610 1.00 58.14 O
ATOM 2 P A B 43 20.836 56.465 -31.963 1.00 61.01 P
ATOM 3 OP1 A B 43 20.583 56.042 -33.375 1.00 60.85 O
ATOM 4 OP2 A B 43 20.415 55.486 -30.912 1.00 58.53 O
ATOM 5 O5' A B 43 22.392 56.816 -31.799 1.00 60.54 O
ATOM 6 C5' A B 43 23.064 57.489 -32.876 1.00 57.80 C
ATOM 7 C4' A B 43 24.536 57.620 -32.557 1.00 53.09 C
ATOM 8 O4' A B 43 24.704 58.278 -31.274 1.00 48.31 O
ATOM 9 C3' A B 43 25.146 56.246 -32.333 1.00 51.51 C
ATOM 10 O3' A B 43 25.608 55.691 -33.565 1.00 53.27 O
ATOM 11 C2' A B 43 26.323 56.568 -31.446 1.00 48.79 C
ATOM 12 O2' A B 43 27.354 57.065 -32.273 1.00 55.09 O
ATOM 13 C1' A B 43 25.777 57.679 -30.568 1.00 42.57 C
ATOM 14 N9 A B 43 25.314 57.152 -29.267 1.00 34.53 N
ATOM 15 C8 A B 43 24.116 56.568 -28.931 1.00 32.19 C
ATOM 16 N7 A B 43 24.053 56.232 -27.656 1.00 30.35 N
ATOM 17 C5 A B 43 25.251 56.626 -27.122 1.00 26.21 C
ATOM 18 C6 A B 43 25.798 56.568 -25.822 1.00 24.90 C
ATOM 19 N6 A B 43 25.167 56.071 -24.762 1.00 22.92 N
ATOM 20 N1 A B 43 27.059 57.079 -25.667 1.00 28.59 N
ATOM 21 C2 A B 43 27.711 57.591 -26.726 1.00 33.02 C
ATOM 22 N3 A B 43 27.290 57.693 -27.984 1.00 32.38 N
ATOM 23 C4 A B 43 26.050 57.196 -28.104 1.00 30.84 C
ATOM 24 P G B 44 25.861 54.098 -33.634 1.00 60.04 P
ATOM 25 OP1 G B 44 26.407 53.674 -34.960 1.00 60.34 O
ATOM 26 OP2 G B 44 24.578 53.425 -33.272 1.00 61.33 O
ATOM 27 O5' G B 44 26.912 53.820 -32.454 1.00 58.83 O
TER

Atoms:
OP1: (29.540,59.345,-14.039)
OP2: (27.732,58.410,-15.452)
C3': (31.495,59.827,-18.570)
C1': (31.727,57.766,-19.698)
C5': (31.453,58.877,-16.287)
O6: (26.807,55.998,-22.669)
O4': (31.937,57.562,-18.294)
C8: (29.330,56.933,-19.336)
C2: (30.003,57.094,-23.643)
C6: (27.963,56.407,-22.540)
C5: (28.678,56.670,-21.352)
C4: (29.982,57.123,-21.421)
P: (29.183,58.322,-15.073)
C4': (32.147,58.833,-17.622)
C2': (31.832,59.257,-19.939)
O2': (33.135,59.637,-20.309)
N1: (28.720,56.641,-23.651)
N2: (30.570,57.269,-24.840)
N3: (30.696,57.357,-22.532)
N7: (28.279,56.553,-20.025)
N9: (30.402,57.299,-20.120)
O5': (30.066,58.497,-16.391)
O3': (32.063,61.128,-18.406)
OP1: (20.583,56.042,-33.375)
OP2: (20.415,55.486,-30.912)
C3': (25.146,56.246,-32.333)
C1': (25.777,57.679,-30.568)
C5': (23.064,57.489,-32.876)
O4': (24.704,58.278,-31.274)
C8: (24.116,56.568,-28.931)
O2': (27.354,57.065,-32.273)
C6: (25.798,56.568,-25.822)
C5: (25.251,56.626,-27.122)
C4: (26.050,57.196,-28.104)
P: (20.836,56.465,-31.963)
C4': (24.536,57.620,-32.557)
C2': (26.323,56.568,-31.446)
C2: (27.711,57.591,-26.726)
N1: (27.059,57.079,-25.667)
N3: (27.290,57.693,-27.984)
N6: (25.167,56.071,-24.762)
N7: (24.053,56.232,-27.656)
N9: (25.314,57.152,-29.267)
O5': (22.392,56.816,-31.799)
O3': (25.608,55.691,-33.565)
Image (generated by PyMOL):
PyMOL image
show in jmol