ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIR:A68:A22

Extra

PDB:
ATOM 1 O3' G A 67 11.898 35.687 25.358 1.00 24.89 O
ATOM 2 P G A 68 12.868 34.976 26.422 1.00 23.62 P
ATOM 3 OP1 G A 68 12.973 33.550 26.033 1.00 23.84 O
ATOM 4 OP2 G A 68 12.382 35.291 27.781 1.00 23.19 O
ATOM 5 O5' G A 68 14.285 35.685 26.168 1.00 21.90 O
ATOM 6 C5' G A 68 14.884 35.582 24.875 1.00 21.30 C
ATOM 7 C4' G A 68 16.034 36.555 24.666 1.00 21.53 C
ATOM 8 O4' G A 68 15.559 37.920 24.433 1.00 22.43 O
ATOM 9 C3' G A 68 16.981 36.710 25.844 1.00 21.42 C
ATOM 10 O3' G A 68 17.925 35.639 25.903 1.00 20.90 O
ATOM 11 C2' G A 68 17.598 38.069 25.504 1.00 21.52 C
ATOM 12 O2' G A 68 18.478 38.004 24.402 1.00 22.97 O
ATOM 13 C1' G A 68 16.342 38.861 25.155 1.00 20.82 C
ATOM 14 N9 G A 68 15.657 39.264 26.388 1.00 19.61 N
ATOM 15 C8 G A 68 14.487 38.742 26.886 1.00 18.84 C
ATOM 16 N7 G A 68 14.122 39.256 28.021 1.00 19.06 N
ATOM 17 C5 G A 68 15.114 40.180 28.299 1.00 18.67 C
ATOM 18 C6 G A 68 15.241 41.041 29.407 1.00 18.73 C
ATOM 19 O6 G A 68 14.466 41.144 30.368 1.00 19.75 O
ATOM 20 N1 G A 68 16.386 41.826 29.326 1.00 17.94 N
ATOM 21 C2 G A 68 17.285 41.782 28.289 1.00 17.39 C
ATOM 22 N2 G A 68 18.328 42.615 28.381 1.00 17.68 N
ATOM 23 N3 G A 68 17.175 40.978 27.244 1.00 17.63 N
ATOM 24 C4 G A 68 16.070 40.200 27.313 1.00 18.40 C
ATOM 25 P C A 69 18.488 35.172 27.323 1.00 19.22 P
ATOM 26 OP1 C A 69 19.471 34.090 27.089 1.00 19.50 O
ATOM 27 OP2 C A 69 17.358 34.993 28.259 1.00 18.14 O
ATOM 28 O5' C A 69 19.282 36.467 27.808 1.00 19.95 O
TER

ATOM 1 O3' G B 21 17.472 47.096 39.504 1.00 17.38 O
ATOM 2 P A B 22 16.577 48.057 38.583 1.00 17.69 P
ATOM 3 OP1 A B 22 16.400 49.351 39.292 1.00 16.91 O
ATOM 4 OP2 A B 22 15.345 47.344 38.167 1.00 17.15 O
ATOM 5 O5' A B 22 17.563 48.204 37.315 1.00 16.37 O
ATOM 6 C5' A B 22 18.937 48.518 37.496 1.00 16.18 C
ATOM 7 C4' A B 22 19.798 48.177 36.293 1.00 17.52 C
ATOM 8 O4' A B 22 20.006 46.742 36.207 1.00 18.97 O
ATOM 9 C3' A B 22 19.235 48.553 34.932 1.00 17.93 C
ATOM 10 O3' A B 22 19.545 49.889 34.620 1.00 18.66 O
ATOM 11 C2' A B 22 19.953 47.571 34.006 1.00 18.05 C
ATOM 12 O2' A B 22 21.273 47.949 33.669 1.00 17.94 O
ATOM 13 C1' A B 22 19.954 46.311 34.857 1.00 18.10 C
ATOM 14 N9 A B 22 18.741 45.527 34.648 1.00 17.86 N
ATOM 15 C8 A B 22 17.633 45.465 35.454 1.00 17.72 C
ATOM 16 N7 A B 22 16.686 44.678 35.003 1.00 18.03 N
ATOM 17 C5 A B 22 17.213 44.193 33.816 1.00 18.23 C
ATOM 18 C6 A B 22 16.704 43.305 32.847 1.00 18.15 C
ATOM 19 N6 A B 22 15.502 42.735 32.954 1.00 18.59 N
ATOM 20 N1 A B 22 17.472 43.026 31.772 1.00 18.03 N
ATOM 21 C2 A B 22 18.683 43.601 31.674 1.00 18.28 C
ATOM 22 N3 A B 22 19.274 44.451 32.517 1.00 18.11 N
ATOM 23 C4 A B 22 18.477 44.707 33.576 1.00 18.24 C
ATOM 24 P U B 23 18.486 50.772 33.810 1.00 19.86 P
ATOM 25 OP1 U B 23 19.037 52.142 33.677 1.00 20.47 O
ATOM 26 OP2 U B 23 17.139 50.595 34.405 1.00 18.84 O
ATOM 27 O5' U B 23 18.542 50.072 32.369 1.00 20.61 O
TER

Atoms:
OP1: (12.973,33.550,26.033)
OP2: (12.382,35.291,27.781)
C3': (16.981,36.710,25.844)
C1': (16.342,38.861,25.155)
C5': (14.884,35.582,24.875)
O6: (14.466,41.144,30.368)
O4': (15.559,37.920,24.433)
C8: (14.487,38.742,26.886)
C2: (17.285,41.782,28.289)
C6: (15.241,41.041,29.407)
C5: (15.114,40.180,28.299)
C4: (16.070,40.200,27.313)
P: (12.868,34.976,26.422)
C4': (16.034,36.555,24.666)
C2': (17.598,38.069,25.504)
O2': (18.478,38.004,24.402)
N1: (16.386,41.826,29.326)
N2: (18.328,42.615,28.381)
N3: (17.175,40.978,27.244)
N7: (14.122,39.256,28.021)
N9: (15.657,39.264,26.388)
O5': (14.285,35.685,26.168)
O3': (17.925,35.639,25.903)
OP1: (16.400,49.351,39.292)
OP2: (15.345,47.344,38.167)
C3': (19.235,48.553,34.932)
C1': (19.954,46.311,34.857)
C5': (18.937,48.518,37.496)
O4': (20.006,46.742,36.207)
C8: (17.633,45.465,35.454)
O2': (21.273,47.949,33.669)
C6: (16.704,43.305,32.847)
C5: (17.213,44.193,33.816)
C4: (18.477,44.707,33.576)
P: (16.577,48.057,38.583)
C4': (19.798,48.177,36.293)
C2': (19.953,47.571,34.006)
C2: (18.683,43.601,31.674)
N1: (17.472,43.026,31.772)
N3: (19.274,44.451,32.517)
N6: (15.502,42.735,32.954)
N7: (16.686,44.678,35.003)
N9: (18.741,45.527,34.648)
O5': (17.563,48.204,37.315)
O3': (19.545,49.889,34.620)
Image (generated by PyMOL):
PyMOL image
show in jmol