ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIR:A140:A161

Extra

PDB:
ATOM 1 O3' U A 139 43.581 18.207 23.250 1.00 22.70 O
ATOM 2 P G A 140 44.432 16.880 22.904 1.00 21.27 P
ATOM 3 OP1 G A 140 45.068 16.421 24.163 1.00 21.20 O
ATOM 4 OP2 G A 140 45.299 17.091 21.721 1.00 20.75 O
ATOM 5 O5' G A 140 43.245 15.895 22.485 1.00 19.89 O
ATOM 6 C5' G A 140 42.384 15.475 23.529 1.00 18.69 C
ATOM 7 C4' G A 140 41.061 14.969 23.017 1.00 18.00 C
ATOM 8 O4' G A 140 40.439 15.956 22.166 1.00 18.06 O
ATOM 9 C3' G A 140 41.125 13.744 22.129 1.00 17.61 C
ATOM 10 O3' G A 140 41.350 12.583 22.897 1.00 18.40 O
ATOM 11 C2' G A 140 39.725 13.798 21.532 1.00 17.21 C
ATOM 12 O2' G A 140 38.708 13.402 22.431 1.00 17.64 O
ATOM 13 C1' G A 140 39.614 15.291 21.226 1.00 16.65 C
ATOM 14 N9 G A 140 40.091 15.580 19.877 1.00 15.61 N
ATOM 15 C8 G A 140 41.293 16.153 19.527 1.00 15.03 C
ATOM 16 N7 G A 140 41.450 16.269 18.241 1.00 14.81 N
ATOM 17 C5 G A 140 40.284 15.739 17.715 1.00 14.27 C
ATOM 18 C6 G A 140 39.890 15.595 16.377 1.00 14.14 C
ATOM 19 O6 G A 140 40.524 15.925 15.381 1.00 15.25 O
ATOM 20 N1 G A 140 38.636 15.009 16.246 1.00 14.94 N
ATOM 21 C2 G A 140 37.845 14.605 17.302 1.00 14.93 C
ATOM 22 N2 G A 140 36.656 14.049 16.999 1.00 14.45 N
ATOM 23 N3 G A 140 38.213 14.740 18.572 1.00 14.85 N
ATOM 24 C4 G A 140 39.438 15.306 18.701 1.00 14.56 C
ATOM 25 P U A 141 42.480 11.535 22.466 1.00 19.83 P
ATOM 26 OP1 U A 141 42.706 10.674 23.653 1.00 19.31 O
ATOM 27 OP2 U A 141 43.623 12.252 21.845 1.00 19.16 O
ATOM 28 O5' U A 141 41.789 10.706 21.282 1.00 19.14 O
TER

ATOM 1 O3' G B 160 36.657 12.917 5.345 1.00 34.55 O
ATOM 2 P A B 161 35.475 13.923 5.705 1.00 34.31 P
ATOM 3 OP1 A B 161 34.615 14.053 4.500 1.00 34.54 O
ATOM 4 OP2 A B 161 36.100 15.106 6.346 1.00 33.70 O
ATOM 5 O5' A B 161 34.640 13.165 6.836 1.00 33.37 O
ATOM 6 C5' A B 161 34.141 11.844 6.669 1.00 32.05 C
ATOM 7 C4' A B 161 33.875 11.227 8.039 1.00 31.12 C
ATOM 8 O4' A B 161 34.948 11.525 8.975 1.00 29.78 O
ATOM 9 C3' A B 161 32.605 11.684 8.752 1.00 30.41 C
ATOM 10 O3' A B 161 32.184 10.591 9.569 1.00 29.97 O
ATOM 11 C2' A B 161 33.132 12.880 9.554 1.00 29.65 C
ATOM 12 O2' A B 161 32.299 13.269 10.626 1.00 29.72 O
ATOM 13 C1' A B 161 34.451 12.298 10.053 1.00 29.14 C
ATOM 14 N9 A B 161 35.481 13.270 10.400 1.00 29.19 N
ATOM 15 C8 A B 161 36.027 14.217 9.581 1.00 29.30 C
ATOM 16 N7 A B 161 36.951 14.947 10.156 1.00 28.95 N
ATOM 17 C5 A B 161 37.024 14.447 11.439 1.00 28.25 C
ATOM 18 C6 A B 161 37.808 14.804 12.549 1.00 27.79 C
ATOM 19 N6 A B 161 38.709 15.783 12.531 1.00 27.91 N
ATOM 20 N1 A B 161 37.638 14.109 13.687 1.00 28.45 N
ATOM 21 C2 A B 161 36.733 13.121 13.714 1.00 28.67 C
ATOM 22 N3 A B 161 35.933 12.699 12.736 1.00 28.80 N
ATOM 23 C4 A B 161 36.128 13.409 11.610 1.00 28.81 C
ATOM 24 P G B 162 30.679 10.056 9.648 1.00 29.98 P
ATOM 25 OP1 G B 162 30.751 8.581 9.767 1.00 29.77 O
ATOM 26 OP2 G B 162 29.879 10.716 8.587 1.00 28.57 O
ATOM 27 O5' G B 162 30.212 10.546 11.104 1.00 28.74 O
TER

Atoms:
OP1: (45.068,16.421,24.163)
OP2: (45.299,17.091,21.721)
C3': (41.125,13.744,22.129)
C1': (39.614,15.291,21.226)
C5': (42.384,15.475,23.529)
O6: (40.524,15.925,15.381)
O4': (40.439,15.956,22.166)
C8: (41.293,16.153,19.527)
C2: (37.845,14.605,17.302)
C6: (39.890,15.595,16.377)
C5: (40.284,15.739,17.715)
C4: (39.438,15.306,18.701)
P: (44.432,16.880,22.904)
C4': (41.061,14.969,23.017)
C2': (39.725,13.798,21.532)
O2': (38.708,13.402,22.431)
N1: (38.636,15.009,16.246)
N2: (36.656,14.049,16.999)
N3: (38.213,14.740,18.572)
N7: (41.450,16.269,18.241)
N9: (40.091,15.580,19.877)
O5': (43.245,15.895,22.485)
O3': (41.350,12.583,22.897)
OP1: (34.615,14.053,4.500)
OP2: (36.100,15.106,6.346)
C3': (32.605,11.684,8.752)
C1': (34.451,12.298,10.053)
C5': (34.141,11.844,6.669)
O4': (34.948,11.525,8.975)
C8: (36.027,14.217,9.581)
O2': (32.299,13.269,10.626)
C6: (37.808,14.804,12.549)
C5: (37.024,14.447,11.439)
C4: (36.128,13.409,11.610)
P: (35.475,13.923,5.705)
C4': (33.875,11.227,8.039)
C2': (33.132,12.880,9.554)
C2: (36.733,13.121,13.714)
N1: (37.638,14.109,13.687)
N3: (35.933,12.699,12.736)
N6: (38.709,15.783,12.531)
N7: (36.951,14.947,10.156)
N9: (35.481,13.270,10.400)
O5': (34.640,13.165,6.836)
O3': (32.184,10.591,9.569)
Image (generated by PyMOL):
PyMOL image
show in jmol