Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2TRA:A25:A43
Extra
PDB:
ATOM 1 O3' U A 24 10.535 9.396 -16.221 1.00 1.00 O
ATOM 2 P G A 25 9.077 8.870 -16.714 1.00 3.66 P
ATOM 3 OP1 G A 25 9.090 8.336 -18.104 1.00 4.56 O
ATOM 4 OP2 G A 25 8.118 9.990 -16.550 1.00 7.76 O
ATOM 5 O5' G A 25 8.715 7.695 -15.698 1.00 1.00 O
ATOM 6 C5' G A 25 8.961 6.372 -16.251 1.00 2.60 C
ATOM 7 C4' G A 25 8.290 5.434 -15.279 1.00 1.00 C
ATOM 8 O4' G A 25 8.481 5.866 -13.948 1.00 1.56 O
ATOM 9 C3' G A 25 6.784 5.359 -15.428 1.00 1.00 C
ATOM 10 O3' G A 25 6.334 4.482 -16.460 1.00 1.00 O
ATOM 11 C2' G A 25 6.334 4.900 -14.038 1.00 2.56 C
ATOM 12 O2' G A 25 6.494 3.483 -14.008 1.00 6.05 O
ATOM 13 C1' G A 25 7.343 5.589 -13.156 1.00 2.81 C
ATOM 14 N9 G A 25 6.747 6.838 -12.633 1.00 1.64 N
ATOM 15 C8 G A 25 6.931 8.113 -13.096 1.00 2.58 C
ATOM 16 N7 G A 25 6.236 9.011 -12.438 1.00 1.00 N
ATOM 17 C5 G A 25 5.541 8.269 -11.497 1.00 1.00 C
ATOM 18 C6 G A 25 4.619 8.653 -10.495 1.00 1.00 C
ATOM 19 O6 G A 25 4.219 9.794 -10.241 1.00 3.40 O
ATOM 20 N1 G A 25 4.133 7.621 -9.732 1.00 1.00 N
ATOM 21 C2 G A 25 4.520 6.332 -9.942 1.00 1.00 C
ATOM 22 N2 G A 25 3.973 5.427 -9.120 1.00 3.50 N
ATOM 23 N3 G A 25 5.375 5.913 -10.869 1.00 1.00 N
ATOM 24 C4 G A 25 5.843 6.932 -11.601 1.00 1.00 C
ATOM 25 P G A 26 4.945 4.988 -17.118 1.00 1.00 P
ATOM 26 OP1 G A 26 4.631 4.212 -18.359 1.00 9.17 O
ATOM 27 OP2 G A 26 5.314 6.399 -17.417 1.00 1.00 O
ATOM 28 O5' G A 26 3.825 4.718 -16.026 1.00 1.00 O
TER
ATOM 1 O3' C B 42 -5.510 13.135 -5.203 1.00 3.38 O
ATOM 2 P A B 43 -4.354 12.967 -4.066 1.00 1.00 P
ATOM 3 OP1 A B 43 -5.006 13.257 -2.736 1.00 15.28 O
ATOM 4 OP2 A B 43 -3.333 13.966 -4.440 1.00 1.00 O
ATOM 5 O5' A B 43 -3.930 11.434 -4.171 1.00 1.00 O
ATOM 6 C5' A B 43 -5.049 10.490 -4.216 1.00 1.00 C
ATOM 7 C4' A B 43 -4.373 9.146 -4.485 1.00 3.13 C
ATOM 8 O4' A B 43 -3.967 9.126 -5.831 1.00 10.85 O
ATOM 9 C3' A B 43 -3.143 8.984 -3.618 1.00 1.00 C
ATOM 10 O3' A B 43 -3.567 8.539 -2.332 1.00 3.38 O
ATOM 11 C2' A B 43 -2.325 8.005 -4.440 1.00 1.00 C
ATOM 12 O2' A B 43 -2.798 6.709 -4.096 1.00 4.61 O
ATOM 13 C1' A B 43 -2.700 8.410 -5.860 1.00 5.93 C
ATOM 14 N9 A B 43 -1.599 9.207 -6.399 1.00 2.23 N
ATOM 15 C8 A B 43 -1.439 10.571 -6.399 1.00 5.54 C
ATOM 16 N7 A B 43 -0.326 10.976 -6.982 1.00 8.30 N
ATOM 17 C5 A B 43 0.283 9.794 -7.385 1.00 2.10 C
ATOM 18 C6 A B 43 1.507 9.558 -8.058 1.00 1.00 C
ATOM 19 N6 A B 43 2.337 10.517 -8.432 1.00 1.81 N
ATOM 20 N1 A B 43 1.802 8.248 -8.282 1.00 1.00 N
ATOM 21 C2 A B 43 0.953 7.256 -7.909 1.00 4.41 C
ATOM 22 N3 A B 43 -0.215 7.405 -7.281 1.00 5.54 N
ATOM 23 C4 A B 43 -0.480 8.708 -7.042 1.00 1.00 C
ATOM 24 P G B 44 -2.589 8.336 -1.091 1.00 5.02 P
ATOM 25 OP1 G B 44 -3.124 7.317 -0.134 1.00 10.17 O
ATOM 26 OP2 G B 44 -2.417 9.686 -0.523 1.00 5.22 O
ATOM 27 O5' G B 44 -1.316 7.749 -1.824 1.00 1.00 O
TER
ATOM 2 P G A 25 9.077 8.870 -16.714 1.00 3.66 P
ATOM 3 OP1 G A 25 9.090 8.336 -18.104 1.00 4.56 O
ATOM 4 OP2 G A 25 8.118 9.990 -16.550 1.00 7.76 O
ATOM 5 O5' G A 25 8.715 7.695 -15.698 1.00 1.00 O
ATOM 6 C5' G A 25 8.961 6.372 -16.251 1.00 2.60 C
ATOM 7 C4' G A 25 8.290 5.434 -15.279 1.00 1.00 C
ATOM 8 O4' G A 25 8.481 5.866 -13.948 1.00 1.56 O
ATOM 9 C3' G A 25 6.784 5.359 -15.428 1.00 1.00 C
ATOM 10 O3' G A 25 6.334 4.482 -16.460 1.00 1.00 O
ATOM 11 C2' G A 25 6.334 4.900 -14.038 1.00 2.56 C
ATOM 12 O2' G A 25 6.494 3.483 -14.008 1.00 6.05 O
ATOM 13 C1' G A 25 7.343 5.589 -13.156 1.00 2.81 C
ATOM 14 N9 G A 25 6.747 6.838 -12.633 1.00 1.64 N
ATOM 15 C8 G A 25 6.931 8.113 -13.096 1.00 2.58 C
ATOM 16 N7 G A 25 6.236 9.011 -12.438 1.00 1.00 N
ATOM 17 C5 G A 25 5.541 8.269 -11.497 1.00 1.00 C
ATOM 18 C6 G A 25 4.619 8.653 -10.495 1.00 1.00 C
ATOM 19 O6 G A 25 4.219 9.794 -10.241 1.00 3.40 O
ATOM 20 N1 G A 25 4.133 7.621 -9.732 1.00 1.00 N
ATOM 21 C2 G A 25 4.520 6.332 -9.942 1.00 1.00 C
ATOM 22 N2 G A 25 3.973 5.427 -9.120 1.00 3.50 N
ATOM 23 N3 G A 25 5.375 5.913 -10.869 1.00 1.00 N
ATOM 24 C4 G A 25 5.843 6.932 -11.601 1.00 1.00 C
ATOM 25 P G A 26 4.945 4.988 -17.118 1.00 1.00 P
ATOM 26 OP1 G A 26 4.631 4.212 -18.359 1.00 9.17 O
ATOM 27 OP2 G A 26 5.314 6.399 -17.417 1.00 1.00 O
ATOM 28 O5' G A 26 3.825 4.718 -16.026 1.00 1.00 O
TER
ATOM 1 O3' C B 42 -5.510 13.135 -5.203 1.00 3.38 O
ATOM 2 P A B 43 -4.354 12.967 -4.066 1.00 1.00 P
ATOM 3 OP1 A B 43 -5.006 13.257 -2.736 1.00 15.28 O
ATOM 4 OP2 A B 43 -3.333 13.966 -4.440 1.00 1.00 O
ATOM 5 O5' A B 43 -3.930 11.434 -4.171 1.00 1.00 O
ATOM 6 C5' A B 43 -5.049 10.490 -4.216 1.00 1.00 C
ATOM 7 C4' A B 43 -4.373 9.146 -4.485 1.00 3.13 C
ATOM 8 O4' A B 43 -3.967 9.126 -5.831 1.00 10.85 O
ATOM 9 C3' A B 43 -3.143 8.984 -3.618 1.00 1.00 C
ATOM 10 O3' A B 43 -3.567 8.539 -2.332 1.00 3.38 O
ATOM 11 C2' A B 43 -2.325 8.005 -4.440 1.00 1.00 C
ATOM 12 O2' A B 43 -2.798 6.709 -4.096 1.00 4.61 O
ATOM 13 C1' A B 43 -2.700 8.410 -5.860 1.00 5.93 C
ATOM 14 N9 A B 43 -1.599 9.207 -6.399 1.00 2.23 N
ATOM 15 C8 A B 43 -1.439 10.571 -6.399 1.00 5.54 C
ATOM 16 N7 A B 43 -0.326 10.976 -6.982 1.00 8.30 N
ATOM 17 C5 A B 43 0.283 9.794 -7.385 1.00 2.10 C
ATOM 18 C6 A B 43 1.507 9.558 -8.058 1.00 1.00 C
ATOM 19 N6 A B 43 2.337 10.517 -8.432 1.00 1.81 N
ATOM 20 N1 A B 43 1.802 8.248 -8.282 1.00 1.00 N
ATOM 21 C2 A B 43 0.953 7.256 -7.909 1.00 4.41 C
ATOM 22 N3 A B 43 -0.215 7.405 -7.281 1.00 5.54 N
ATOM 23 C4 A B 43 -0.480 8.708 -7.042 1.00 1.00 C
ATOM 24 P G B 44 -2.589 8.336 -1.091 1.00 5.02 P
ATOM 25 OP1 G B 44 -3.124 7.317 -0.134 1.00 10.17 O
ATOM 26 OP2 G B 44 -2.417 9.686 -0.523 1.00 5.22 O
ATOM 27 O5' G B 44 -1.316 7.749 -1.824 1.00 1.00 O
TER
Atoms:
OP1: (9.090,8.336,-18.104)
OP2: (8.118,9.990,-16.550)
C3': (6.784,5.359,-15.428)
C1': (7.343,5.589,-13.156)
C5': (8.961,6.372,-16.251)
O6: (4.219,9.794,-10.241)
O4': (8.481,5.866,-13.948)
C8: (6.931,8.113,-13.096)
C2: (4.520,6.332,-9.942)
C6: (4.619,8.653,-10.495)
C5: (5.541,8.269,-11.497)
C4: (5.843,6.932,-11.601)
P: (9.077,8.870,-16.714)
C4': (8.290,5.434,-15.279)
C2': (6.334,4.900,-14.038)
O2': (6.494,3.483,-14.008)
N1: (4.133,7.621,-9.732)
N2: (3.973,5.427,-9.120)
N3: (5.375,5.913,-10.869)
N7: (6.236,9.011,-12.438)
N9: (6.747,6.838,-12.633)
O5': (8.715,7.695,-15.698)
O3': (6.334,4.482,-16.460)
OP2: (8.118,9.990,-16.550)
C3': (6.784,5.359,-15.428)
C1': (7.343,5.589,-13.156)
C5': (8.961,6.372,-16.251)
O6: (4.219,9.794,-10.241)
O4': (8.481,5.866,-13.948)
C8: (6.931,8.113,-13.096)
C2: (4.520,6.332,-9.942)
C6: (4.619,8.653,-10.495)
C5: (5.541,8.269,-11.497)
C4: (5.843,6.932,-11.601)
P: (9.077,8.870,-16.714)
C4': (8.290,5.434,-15.279)
C2': (6.334,4.900,-14.038)
O2': (6.494,3.483,-14.008)
N1: (4.133,7.621,-9.732)
N2: (3.973,5.427,-9.120)
N3: (5.375,5.913,-10.869)
N7: (6.236,9.011,-12.438)
N9: (6.747,6.838,-12.633)
O5': (8.715,7.695,-15.698)
O3': (6.334,4.482,-16.460)
OP1: (-5.006,13.257,-2.736)
OP2: (-3.333,13.966,-4.440)
C3': (-3.143,8.984,-3.618)
C1': (-2.700,8.410,-5.860)
C5': (-5.049,10.490,-4.216)
O4': (-3.967,9.126,-5.831)
C8: (-1.439,10.571,-6.399)
O2': (-2.798,6.709,-4.096)
C6: (1.507,9.558,-8.058)
C5: (0.283,9.794,-7.385)
C4: (-0.480,8.708,-7.042)
P: (-4.354,12.967,-4.066)
C4': (-4.373,9.146,-4.485)
C2': (-2.325,8.005,-4.440)
C2: (0.953,7.256,-7.909)
N1: (1.802,8.248,-8.282)
N3: (-0.215,7.405,-7.281)
N6: (2.337,10.517,-8.432)
N7: (-0.326,10.976,-6.982)
N9: (-1.599,9.207,-6.399)
O5': (-3.930,11.434,-4.171)
O3': (-3.567,8.539,-2.332)
OP2: (-3.333,13.966,-4.440)
C3': (-3.143,8.984,-3.618)
C1': (-2.700,8.410,-5.860)
C5': (-5.049,10.490,-4.216)
O4': (-3.967,9.126,-5.831)
C8: (-1.439,10.571,-6.399)
O2': (-2.798,6.709,-4.096)
C6: (1.507,9.558,-8.058)
C5: (0.283,9.794,-7.385)
C4: (-0.480,8.708,-7.042)
P: (-4.354,12.967,-4.066)
C4': (-4.373,9.146,-4.485)
C2': (-2.325,8.005,-4.440)
C2: (0.953,7.256,-7.909)
N1: (1.802,8.248,-8.282)
N3: (-0.215,7.405,-7.281)
N6: (2.337,10.517,-8.432)
N7: (-0.326,10.976,-6.982)
N9: (-1.599,9.207,-6.399)
O5': (-3.930,11.434,-4.171)
O3': (-3.567,8.539,-2.332)
Image (generated by PyMOL):