ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MUR:R90:R4

Extra

PDB:
ATOM 1 O3' U A 89 -19.459 -2.075 34.149 1.00132.57 O
ATOM 2 P G A 90 -19.851 -2.561 32.664 1.00127.34 P
ATOM 3 OP1 G A 90 -21.177 -3.212 32.774 1.00128.43 O
ATOM 4 OP2 G A 90 -18.693 -3.319 32.131 1.00124.21 O
ATOM 5 O5' G A 90 -19.996 -1.234 31.770 1.00123.29 O
ATOM 6 C5' G A 90 -20.087 -1.312 30.338 1.00115.49 C
ATOM 7 C4' G A 90 -20.035 0.066 29.695 1.00111.62 C
ATOM 8 O4' G A 90 -18.808 0.203 28.930 1.00107.76 O
ATOM 9 C3' G A 90 -21.141 0.362 28.688 1.00109.08 C
ATOM 10 O3' G A 90 -22.270 0.946 29.323 1.00111.41 O
ATOM 11 C2' G A 90 -20.453 1.328 27.724 1.00106.44 C
ATOM 12 O2' G A 90 -20.360 2.652 28.213 1.00108.38 O
ATOM 13 C1' G A 90 -19.074 0.689 27.625 1.00104.39 C
ATOM 14 N9 G A 90 -19.011 -0.436 26.686 1.00101.37 N
ATOM 15 C8 G A 90 -18.479 -1.678 26.947 1.00101.00 C
ATOM 16 N7 G A 90 -18.554 -2.508 25.946 1.00 98.42 N
ATOM 17 C5 G A 90 -19.182 -1.777 24.947 1.00 96.82 C
ATOM 18 C6 G A 90 -19.535 -2.160 23.627 1.00 93.64 C
ATOM 19 O6 G A 90 -19.350 -3.254 23.074 1.00 91.37 O
ATOM 20 N1 G A 90 -20.158 -1.125 22.927 1.00 93.08 N
ATOM 21 C2 G A 90 -20.411 0.126 23.445 1.00 95.49 C
ATOM 22 N2 G A 90 -21.022 0.994 22.627 1.00 95.21 N
ATOM 23 N3 G A 90 -20.085 0.497 24.682 1.00 98.52 N
ATOM 24 C4 G A 90 -19.474 -0.498 25.383 1.00 98.84 C
ATOM 25 P G A 91 -23.713 0.900 28.628 1.00110.44 P
ATOM 26 OP1 G A 91 -24.673 1.499 29.585 1.00114.03 O
ATOM 27 OP2 G A 91 -23.947 -0.475 28.136 1.00107.75 O
ATOM 28 O5' G A 91 -23.536 1.859 27.349 1.00106.13 O
TER

ATOM 1 O3' C B 3 -25.771 -6.876 13.202 1.00 90.68 O
ATOM 2 P A B 4 -24.659 -6.006 12.445 1.00 88.46 P
ATOM 3 OP1 A B 4 -24.871 -6.215 10.996 1.00 88.54 O
ATOM 4 OP2 A B 4 -23.328 -6.295 13.035 1.00 86.29 O
ATOM 5 O5' A B 4 -25.089 -4.509 12.820 1.00 87.25 O
ATOM 6 C5' A B 4 -24.139 -3.529 13.206 1.00 83.57 C
ATOM 7 C4' A B 4 -24.822 -2.476 14.055 1.00 85.33 C
ATOM 8 O4' A B 4 -25.418 -3.098 15.226 1.00 86.70 O
ATOM 9 C3' A B 4 -23.893 -1.419 14.629 1.00 84.54 C
ATOM 10 O3' A B 4 -23.699 -0.353 13.715 1.00 84.17 O
ATOM 11 C2' A B 4 -24.662 -0.994 15.875 1.00 86.46 C
ATOM 12 O2' A B 4 -25.798 -0.203 15.589 1.00 87.82 O
ATOM 13 C1' A B 4 -25.074 -2.366 16.390 1.00 86.59 C
ATOM 14 N9 A B 4 -23.994 -3.050 17.109 1.00 84.16 N
ATOM 15 C8 A B 4 -23.344 -4.193 16.730 1.00 81.43 C
ATOM 16 N7 A B 4 -22.408 -4.580 17.562 1.00 81.38 N
ATOM 17 C5 A B 4 -22.440 -3.627 18.566 1.00 83.63 C
ATOM 18 C6 A B 4 -21.691 -3.464 19.757 1.00 83.59 C
ATOM 19 N6 A B 4 -20.721 -4.301 20.141 1.00 82.10 N
ATOM 20 N1 A B 4 -21.974 -2.400 20.543 1.00 85.29 N
ATOM 21 C2 A B 4 -22.938 -1.551 20.160 1.00 86.68 C
ATOM 22 N3 A B 4 -23.709 -1.603 19.071 1.00 87.25 N
ATOM 23 C4 A B 4 -23.410 -2.672 18.303 1.00 85.38 C
ATOM 24 P C B 5 -22.263 0.346 13.612 1.00 82.77 P
ATOM 25 OP1 C B 5 -22.330 1.367 12.545 1.00 84.51 O
ATOM 26 OP2 C B 5 -21.216 -0.699 13.547 1.00 80.54 O
ATOM 27 O5' C B 5 -22.131 1.084 15.018 1.00 82.50 O
TER

Atoms:
OP1: (-21.177,-3.212,32.774)
OP2: (-18.693,-3.319,32.131)
C3': (-21.141,0.362,28.688)
C1': (-19.074,0.689,27.625)
C5': (-20.087,-1.312,30.338)
O6: (-19.350,-3.254,23.074)
O4': (-18.808,0.203,28.930)
C8: (-18.479,-1.678,26.947)
C2: (-20.411,0.126,23.445)
C6: (-19.535,-2.160,23.627)
C5: (-19.182,-1.777,24.947)
C4: (-19.474,-0.498,25.383)
P: (-19.851,-2.561,32.664)
C4': (-20.035,0.066,29.695)
C2': (-20.453,1.328,27.724)
O2': (-20.360,2.652,28.213)
N1: (-20.158,-1.125,22.927)
N2: (-21.022,0.994,22.627)
N3: (-20.085,0.497,24.682)
N7: (-18.554,-2.508,25.946)
N9: (-19.011,-0.436,26.686)
O5': (-19.996,-1.234,31.770)
O3': (-22.270,0.946,29.323)
OP1: (-24.871,-6.215,10.996)
OP2: (-23.328,-6.295,13.035)
C3': (-23.893,-1.419,14.629)
C1': (-25.074,-2.366,16.390)
C5': (-24.139,-3.529,13.206)
O4': (-25.418,-3.098,15.226)
C8: (-23.344,-4.193,16.730)
O2': (-25.798,-0.203,15.589)
C6: (-21.691,-3.464,19.757)
C5: (-22.440,-3.627,18.566)
C4: (-23.410,-2.672,18.303)
P: (-24.659,-6.006,12.445)
C4': (-24.822,-2.476,14.055)
C2': (-24.662,-0.994,15.875)
C2: (-22.938,-1.551,20.160)
N1: (-21.974,-2.400,20.543)
N3: (-23.709,-1.603,19.071)
N6: (-20.721,-4.301,20.141)
N7: (-22.408,-4.580,17.562)
N9: (-23.994,-3.050,17.109)
O5': (-25.089,-4.509,12.820)
O3': (-23.699,-0.353,13.715)
Image (generated by PyMOL):
PyMOL image
show in jmol