Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0277:0351
Extra
PDB:
ATOM 1 O3' A A 276 69.254 120.384 2.371 1.00111.19 O
ATOM 2 P G A 277 68.008 121.034 3.164 1.00110.82 P
ATOM 3 OP1 G A 277 68.575 121.934 4.204 1.00110.90 O
ATOM 4 OP2 G A 277 67.066 119.950 3.563 1.00109.35 O
ATOM 5 O5' G A 277 67.280 121.937 2.069 1.00109.75 O
ATOM 6 C5' G A 277 67.964 123.050 1.455 1.00107.15 C
ATOM 7 C4' G A 277 67.344 123.375 0.115 1.00105.29 C
ATOM 8 O4' G A 277 67.396 122.192 -0.729 1.00104.05 O
ATOM 9 C3' G A 277 65.867 123.736 0.127 1.00104.46 C
ATOM 10 O3' G A 277 65.617 125.089 0.484 1.00104.98 O
ATOM 11 C2' G A 277 65.454 123.428 -1.303 1.00102.90 C
ATOM 12 O2' G A 277 65.852 124.428 -2.220 1.00102.15 O
ATOM 13 C1' G A 277 66.241 122.141 -1.554 1.00102.23 C
ATOM 14 N9 G A 277 65.452 120.969 -1.183 1.00100.23 N
ATOM 15 C8 G A 277 65.613 120.151 -0.088 1.00 99.66 C
ATOM 16 N7 G A 277 64.715 119.207 -0.018 1.00 98.57 N
ATOM 17 C5 G A 277 63.919 119.410 -1.136 1.00 98.58 C
ATOM 18 C6 G A 277 62.779 118.708 -1.593 1.00 98.34 C
ATOM 19 O6 G A 277 62.213 117.734 -1.081 1.00 97.75 O
ATOM 20 N1 G A 277 62.290 119.250 -2.774 1.00 98.31 N
ATOM 21 C2 G A 277 62.820 120.330 -3.431 1.00 98.59 C
ATOM 22 N2 G A 277 62.206 120.702 -4.561 1.00 98.77 N
ATOM 23 N3 G A 277 63.873 120.996 -3.013 1.00 99.11 N
ATOM 24 C4 G A 277 64.370 120.486 -1.869 1.00 99.17 C
ATOM 25 P C A 278 64.153 125.512 1.002 1.00106.07 P
ATOM 26 OP1 C A 278 64.229 126.931 1.447 1.00106.03 O
ATOM 27 OP2 C A 278 63.669 124.467 1.950 1.00105.26 O
ATOM 28 O5' C A 278 63.248 125.450 -0.309 1.00104.46 O
TER
ATOM 1 O3' G B 350 52.678 115.201 -6.861 1.00108.67 O
ATOM 2 P A B 351 53.893 114.438 -7.588 1.00108.40 P
ATOM 3 OP1 A B 351 53.331 113.800 -8.805 1.00108.90 O
ATOM 4 OP2 A B 351 54.608 113.603 -6.586 1.00108.75 O
ATOM 5 O5' A B 351 54.878 115.606 -8.036 1.00108.06 O
ATOM 6 C5' A B 351 54.467 116.601 -8.995 1.00108.85 C
ATOM 7 C4' A B 351 55.396 117.791 -8.936 1.00109.03 C
ATOM 8 O4' A B 351 55.351 118.348 -7.595 1.00108.49 O
ATOM 9 C3' A B 351 56.867 117.479 -9.166 1.00108.99 C
ATOM 10 O3' A B 351 57.197 117.440 -10.550 1.00109.81 O
ATOM 11 C2' A B 351 57.561 118.609 -8.420 1.00108.79 C
ATOM 12 O2' A B 351 57.583 119.827 -9.137 1.00109.03 O
ATOM 13 C1' A B 351 56.653 118.744 -7.197 1.00108.51 C
ATOM 14 N9 A B 351 57.079 117.862 -6.112 1.00108.11 N
ATOM 15 C8 A B 351 56.519 116.672 -5.702 1.00108.25 C
ATOM 16 N7 A B 351 57.151 116.107 -4.703 1.00107.53 N
ATOM 17 C5 A B 351 58.195 116.981 -4.435 1.00107.54 C
ATOM 18 C6 A B 351 59.230 116.953 -3.490 1.00107.48 C
ATOM 19 N6 A B 351 59.403 115.967 -2.606 1.00107.15 N
ATOM 20 N1 A B 351 60.098 117.985 -3.485 1.00107.63 N
ATOM 21 C2 A B 351 59.931 118.970 -4.380 1.00107.23 C
ATOM 22 N3 A B 351 59.007 119.107 -5.318 1.00107.00 N
ATOM 23 C4 A B 351 58.158 118.068 -5.292 1.00107.64 C
ATOM 24 P C B 352 58.600 116.808 -11.018 1.00110.52 P
ATOM 25 OP1 C B 352 58.658 116.939 -12.499 1.00110.68 O
ATOM 26 OP2 C B 352 58.767 115.468 -10.392 1.00109.76 O
ATOM 27 O5' C B 352 59.686 117.788 -10.389 1.00109.02 O
TER
ATOM 2 P G A 277 68.008 121.034 3.164 1.00110.82 P
ATOM 3 OP1 G A 277 68.575 121.934 4.204 1.00110.90 O
ATOM 4 OP2 G A 277 67.066 119.950 3.563 1.00109.35 O
ATOM 5 O5' G A 277 67.280 121.937 2.069 1.00109.75 O
ATOM 6 C5' G A 277 67.964 123.050 1.455 1.00107.15 C
ATOM 7 C4' G A 277 67.344 123.375 0.115 1.00105.29 C
ATOM 8 O4' G A 277 67.396 122.192 -0.729 1.00104.05 O
ATOM 9 C3' G A 277 65.867 123.736 0.127 1.00104.46 C
ATOM 10 O3' G A 277 65.617 125.089 0.484 1.00104.98 O
ATOM 11 C2' G A 277 65.454 123.428 -1.303 1.00102.90 C
ATOM 12 O2' G A 277 65.852 124.428 -2.220 1.00102.15 O
ATOM 13 C1' G A 277 66.241 122.141 -1.554 1.00102.23 C
ATOM 14 N9 G A 277 65.452 120.969 -1.183 1.00100.23 N
ATOM 15 C8 G A 277 65.613 120.151 -0.088 1.00 99.66 C
ATOM 16 N7 G A 277 64.715 119.207 -0.018 1.00 98.57 N
ATOM 17 C5 G A 277 63.919 119.410 -1.136 1.00 98.58 C
ATOM 18 C6 G A 277 62.779 118.708 -1.593 1.00 98.34 C
ATOM 19 O6 G A 277 62.213 117.734 -1.081 1.00 97.75 O
ATOM 20 N1 G A 277 62.290 119.250 -2.774 1.00 98.31 N
ATOM 21 C2 G A 277 62.820 120.330 -3.431 1.00 98.59 C
ATOM 22 N2 G A 277 62.206 120.702 -4.561 1.00 98.77 N
ATOM 23 N3 G A 277 63.873 120.996 -3.013 1.00 99.11 N
ATOM 24 C4 G A 277 64.370 120.486 -1.869 1.00 99.17 C
ATOM 25 P C A 278 64.153 125.512 1.002 1.00106.07 P
ATOM 26 OP1 C A 278 64.229 126.931 1.447 1.00106.03 O
ATOM 27 OP2 C A 278 63.669 124.467 1.950 1.00105.26 O
ATOM 28 O5' C A 278 63.248 125.450 -0.309 1.00104.46 O
TER
ATOM 1 O3' G B 350 52.678 115.201 -6.861 1.00108.67 O
ATOM 2 P A B 351 53.893 114.438 -7.588 1.00108.40 P
ATOM 3 OP1 A B 351 53.331 113.800 -8.805 1.00108.90 O
ATOM 4 OP2 A B 351 54.608 113.603 -6.586 1.00108.75 O
ATOM 5 O5' A B 351 54.878 115.606 -8.036 1.00108.06 O
ATOM 6 C5' A B 351 54.467 116.601 -8.995 1.00108.85 C
ATOM 7 C4' A B 351 55.396 117.791 -8.936 1.00109.03 C
ATOM 8 O4' A B 351 55.351 118.348 -7.595 1.00108.49 O
ATOM 9 C3' A B 351 56.867 117.479 -9.166 1.00108.99 C
ATOM 10 O3' A B 351 57.197 117.440 -10.550 1.00109.81 O
ATOM 11 C2' A B 351 57.561 118.609 -8.420 1.00108.79 C
ATOM 12 O2' A B 351 57.583 119.827 -9.137 1.00109.03 O
ATOM 13 C1' A B 351 56.653 118.744 -7.197 1.00108.51 C
ATOM 14 N9 A B 351 57.079 117.862 -6.112 1.00108.11 N
ATOM 15 C8 A B 351 56.519 116.672 -5.702 1.00108.25 C
ATOM 16 N7 A B 351 57.151 116.107 -4.703 1.00107.53 N
ATOM 17 C5 A B 351 58.195 116.981 -4.435 1.00107.54 C
ATOM 18 C6 A B 351 59.230 116.953 -3.490 1.00107.48 C
ATOM 19 N6 A B 351 59.403 115.967 -2.606 1.00107.15 N
ATOM 20 N1 A B 351 60.098 117.985 -3.485 1.00107.63 N
ATOM 21 C2 A B 351 59.931 118.970 -4.380 1.00107.23 C
ATOM 22 N3 A B 351 59.007 119.107 -5.318 1.00107.00 N
ATOM 23 C4 A B 351 58.158 118.068 -5.292 1.00107.64 C
ATOM 24 P C B 352 58.600 116.808 -11.018 1.00110.52 P
ATOM 25 OP1 C B 352 58.658 116.939 -12.499 1.00110.68 O
ATOM 26 OP2 C B 352 58.767 115.468 -10.392 1.00109.76 O
ATOM 27 O5' C B 352 59.686 117.788 -10.389 1.00109.02 O
TER
Atoms:
OP1: (68.575,121.934,4.204)
OP2: (67.066,119.950,3.563)
C3': (65.867,123.736,0.127)
C1': (66.241,122.141,-1.554)
C5': (67.964,123.050,1.455)
O6: (62.213,117.734,-1.081)
O4': (67.396,122.192,-0.729)
C8: (65.613,120.151,-0.088)
C2: (62.820,120.330,-3.431)
C6: (62.779,118.708,-1.593)
C5: (63.919,119.410,-1.136)
C4: (64.370,120.486,-1.869)
P: (68.008,121.034,3.164)
C4': (67.344,123.375,0.115)
C2': (65.454,123.428,-1.303)
O2': (65.852,124.428,-2.220)
N1: (62.290,119.250,-2.774)
N2: (62.206,120.702,-4.561)
N3: (63.873,120.996,-3.013)
N7: (64.715,119.207,-0.018)
N9: (65.452,120.969,-1.183)
O5': (67.280,121.937,2.069)
O3': (65.617,125.089,0.484)
OP2: (67.066,119.950,3.563)
C3': (65.867,123.736,0.127)
C1': (66.241,122.141,-1.554)
C5': (67.964,123.050,1.455)
O6: (62.213,117.734,-1.081)
O4': (67.396,122.192,-0.729)
C8: (65.613,120.151,-0.088)
C2: (62.820,120.330,-3.431)
C6: (62.779,118.708,-1.593)
C5: (63.919,119.410,-1.136)
C4: (64.370,120.486,-1.869)
P: (68.008,121.034,3.164)
C4': (67.344,123.375,0.115)
C2': (65.454,123.428,-1.303)
O2': (65.852,124.428,-2.220)
N1: (62.290,119.250,-2.774)
N2: (62.206,120.702,-4.561)
N3: (63.873,120.996,-3.013)
N7: (64.715,119.207,-0.018)
N9: (65.452,120.969,-1.183)
O5': (67.280,121.937,2.069)
O3': (65.617,125.089,0.484)
OP1: (53.331,113.800,-8.805)
OP2: (54.608,113.603,-6.586)
C3': (56.867,117.479,-9.166)
C1': (56.653,118.744,-7.197)
C5': (54.467,116.601,-8.995)
O4': (55.351,118.348,-7.595)
C8: (56.519,116.672,-5.702)
O2': (57.583,119.827,-9.137)
C6: (59.230,116.953,-3.490)
C5: (58.195,116.981,-4.435)
C4: (58.158,118.068,-5.292)
P: (53.893,114.438,-7.588)
C4': (55.396,117.791,-8.936)
C2': (57.561,118.609,-8.420)
C2: (59.931,118.970,-4.380)
N1: (60.098,117.985,-3.485)
N3: (59.007,119.107,-5.318)
N6: (59.403,115.967,-2.606)
N7: (57.151,116.107,-4.703)
N9: (57.079,117.862,-6.112)
O5': (54.878,115.606,-8.036)
O3': (57.197,117.440,-10.550)
OP2: (54.608,113.603,-6.586)
C3': (56.867,117.479,-9.166)
C1': (56.653,118.744,-7.197)
C5': (54.467,116.601,-8.995)
O4': (55.351,118.348,-7.595)
C8: (56.519,116.672,-5.702)
O2': (57.583,119.827,-9.137)
C6: (59.230,116.953,-3.490)
C5: (58.195,116.981,-4.435)
C4: (58.158,118.068,-5.292)
P: (53.893,114.438,-7.588)
C4': (55.396,117.791,-8.936)
C2': (57.561,118.609,-8.420)
C2: (59.931,118.970,-4.380)
N1: (60.098,117.985,-3.485)
N3: (59.007,119.107,-5.318)
N6: (59.403,115.967,-2.606)
N7: (57.151,116.107,-4.703)
N9: (57.079,117.862,-6.112)
O5': (54.878,115.606,-8.036)
O3': (57.197,117.440,-10.550)
Image (generated by PyMOL):