Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A110:A313
Extra
PDB:
ATOM 1 O3' G A 109 -54.951 8.105 -78.286 1.00 23.76 O
ATOM 2 P G A 110 -55.254 8.838 -76.902 1.00 20.35 P
ATOM 3 OP1 G A 110 -55.748 10.210 -77.222 1.00 20.35 O
ATOM 4 OP2 G A 110 -54.038 8.692 -76.062 1.00 20.35 O
ATOM 5 O5' G A 110 -56.431 7.964 -76.305 1.00 20.35 O
ATOM 6 C5' G A 110 -57.517 7.569 -77.120 1.00 20.35 C
ATOM 7 C4' G A 110 -57.982 6.187 -76.765 1.00 20.35 C
ATOM 8 O4' G A 110 -56.929 5.224 -77.048 1.00 20.35 O
ATOM 9 C3' G A 110 -58.302 5.946 -75.299 1.00 20.35 C
ATOM 10 O3' G A 110 -59.564 6.466 -74.902 1.00 20.35 O
ATOM 11 C2' G A 110 -58.200 4.438 -75.211 1.00 20.35 C
ATOM 12 O2' G A 110 -59.337 3.830 -75.806 1.00 20.35 O
ATOM 13 C1' G A 110 -56.975 4.180 -76.099 1.00 20.35 C
ATOM 14 N9 G A 110 -55.733 4.220 -75.314 1.00 20.33 N
ATOM 15 C8 G A 110 -54.769 5.194 -75.333 1.00 20.33 C
ATOM 16 N7 G A 110 -53.804 4.988 -74.476 1.00 20.33 N
ATOM 17 C5 G A 110 -54.163 3.811 -73.837 1.00 20.33 C
ATOM 18 C6 G A 110 -53.508 3.092 -72.804 1.00 20.33 C
ATOM 19 O6 G A 110 -52.448 3.350 -72.218 1.00 20.33 O
ATOM 20 N1 G A 110 -54.221 1.947 -72.464 1.00 20.33 N
ATOM 21 C2 G A 110 -55.401 1.543 -73.030 1.00 20.33 C
ATOM 22 N2 G A 110 -55.904 0.406 -72.548 1.00 20.33 N
ATOM 23 N3 G A 110 -56.039 2.200 -73.979 1.00 20.33 N
ATOM 24 C4 G A 110 -55.360 3.322 -74.338 1.00 20.33 C
ATOM 25 P G A 111 -59.753 7.077 -73.419 1.00 24.27 P
ATOM 26 OP1 G A 111 -61.111 7.691 -73.355 1.00 24.27 O
ATOM 27 OP2 G A 111 -58.568 7.926 -73.129 1.00 24.27 O
ATOM 28 O5' G A 111 -59.702 5.770 -72.515 1.00 24.27 O
TER
ATOM 1 O3' C B 312 -50.079 -1.780 -61.804 1.00 15.53 O
ATOM 2 P A B 313 -49.917 -2.809 -63.020 1.00 24.80 P
ATOM 3 OP1 A B 313 -49.712 -4.141 -62.432 1.00 24.80 O
ATOM 4 OP2 A B 313 -48.878 -2.267 -63.920 1.00 24.80 O
ATOM 5 O5' A B 313 -51.332 -2.739 -63.723 1.00 24.80 O
ATOM 6 C5' A B 313 -52.425 -3.484 -63.220 1.00 24.80 C
ATOM 7 C4' A B 313 -53.272 -3.999 -64.338 1.00 24.80 C
ATOM 8 O4' A B 313 -53.629 -2.885 -65.199 1.00 24.80 O
ATOM 9 C3' A B 313 -52.571 -4.986 -65.249 1.00 24.80 C
ATOM 10 O3' A B 313 -53.551 -5.775 -65.928 1.00 24.80 O
ATOM 11 C2' A B 313 -51.924 -4.066 -66.249 1.00 24.80 C
ATOM 12 O2' A B 313 -51.530 -4.709 -67.428 1.00 24.80 O
ATOM 13 C1' A B 313 -53.078 -3.106 -66.484 1.00 24.80 C
ATOM 14 N9 A B 313 -52.714 -1.810 -67.069 1.00 24.99 N
ATOM 15 C8 A B 313 -51.671 -0.970 -66.761 1.00 24.99 C
ATOM 16 N7 A B 313 -51.659 0.130 -67.480 1.00 24.99 N
ATOM 17 C5 A B 313 -52.766 0.009 -68.300 1.00 24.99 C
ATOM 18 C6 A B 313 -53.294 0.855 -69.278 1.00 24.99 C
ATOM 19 N6 A B 313 -52.724 2.034 -69.573 1.00 24.99 N
ATOM 20 N1 A B 313 -54.411 0.435 -69.935 1.00 24.99 N
ATOM 21 C2 A B 313 -54.961 -0.743 -69.607 1.00 24.99 C
ATOM 22 N3 A B 313 -54.550 -1.614 -68.689 1.00 24.99 N
ATOM 23 C4 A B 313 -53.432 -1.177 -68.067 1.00 24.99 C
ATOM 24 P C B 314 -53.459 -7.373 -65.906 1.00 16.91 P
ATOM 25 OP1 C B 314 -52.028 -7.722 -65.613 1.00 16.91 O
ATOM 26 OP2 C B 314 -54.068 -7.861 -67.157 1.00 16.91 O
ATOM 27 O5' C B 314 -54.394 -7.747 -64.667 1.00 16.91 O
TER
ATOM 2 P G A 110 -55.254 8.838 -76.902 1.00 20.35 P
ATOM 3 OP1 G A 110 -55.748 10.210 -77.222 1.00 20.35 O
ATOM 4 OP2 G A 110 -54.038 8.692 -76.062 1.00 20.35 O
ATOM 5 O5' G A 110 -56.431 7.964 -76.305 1.00 20.35 O
ATOM 6 C5' G A 110 -57.517 7.569 -77.120 1.00 20.35 C
ATOM 7 C4' G A 110 -57.982 6.187 -76.765 1.00 20.35 C
ATOM 8 O4' G A 110 -56.929 5.224 -77.048 1.00 20.35 O
ATOM 9 C3' G A 110 -58.302 5.946 -75.299 1.00 20.35 C
ATOM 10 O3' G A 110 -59.564 6.466 -74.902 1.00 20.35 O
ATOM 11 C2' G A 110 -58.200 4.438 -75.211 1.00 20.35 C
ATOM 12 O2' G A 110 -59.337 3.830 -75.806 1.00 20.35 O
ATOM 13 C1' G A 110 -56.975 4.180 -76.099 1.00 20.35 C
ATOM 14 N9 G A 110 -55.733 4.220 -75.314 1.00 20.33 N
ATOM 15 C8 G A 110 -54.769 5.194 -75.333 1.00 20.33 C
ATOM 16 N7 G A 110 -53.804 4.988 -74.476 1.00 20.33 N
ATOM 17 C5 G A 110 -54.163 3.811 -73.837 1.00 20.33 C
ATOM 18 C6 G A 110 -53.508 3.092 -72.804 1.00 20.33 C
ATOM 19 O6 G A 110 -52.448 3.350 -72.218 1.00 20.33 O
ATOM 20 N1 G A 110 -54.221 1.947 -72.464 1.00 20.33 N
ATOM 21 C2 G A 110 -55.401 1.543 -73.030 1.00 20.33 C
ATOM 22 N2 G A 110 -55.904 0.406 -72.548 1.00 20.33 N
ATOM 23 N3 G A 110 -56.039 2.200 -73.979 1.00 20.33 N
ATOM 24 C4 G A 110 -55.360 3.322 -74.338 1.00 20.33 C
ATOM 25 P G A 111 -59.753 7.077 -73.419 1.00 24.27 P
ATOM 26 OP1 G A 111 -61.111 7.691 -73.355 1.00 24.27 O
ATOM 27 OP2 G A 111 -58.568 7.926 -73.129 1.00 24.27 O
ATOM 28 O5' G A 111 -59.702 5.770 -72.515 1.00 24.27 O
TER
ATOM 1 O3' C B 312 -50.079 -1.780 -61.804 1.00 15.53 O
ATOM 2 P A B 313 -49.917 -2.809 -63.020 1.00 24.80 P
ATOM 3 OP1 A B 313 -49.712 -4.141 -62.432 1.00 24.80 O
ATOM 4 OP2 A B 313 -48.878 -2.267 -63.920 1.00 24.80 O
ATOM 5 O5' A B 313 -51.332 -2.739 -63.723 1.00 24.80 O
ATOM 6 C5' A B 313 -52.425 -3.484 -63.220 1.00 24.80 C
ATOM 7 C4' A B 313 -53.272 -3.999 -64.338 1.00 24.80 C
ATOM 8 O4' A B 313 -53.629 -2.885 -65.199 1.00 24.80 O
ATOM 9 C3' A B 313 -52.571 -4.986 -65.249 1.00 24.80 C
ATOM 10 O3' A B 313 -53.551 -5.775 -65.928 1.00 24.80 O
ATOM 11 C2' A B 313 -51.924 -4.066 -66.249 1.00 24.80 C
ATOM 12 O2' A B 313 -51.530 -4.709 -67.428 1.00 24.80 O
ATOM 13 C1' A B 313 -53.078 -3.106 -66.484 1.00 24.80 C
ATOM 14 N9 A B 313 -52.714 -1.810 -67.069 1.00 24.99 N
ATOM 15 C8 A B 313 -51.671 -0.970 -66.761 1.00 24.99 C
ATOM 16 N7 A B 313 -51.659 0.130 -67.480 1.00 24.99 N
ATOM 17 C5 A B 313 -52.766 0.009 -68.300 1.00 24.99 C
ATOM 18 C6 A B 313 -53.294 0.855 -69.278 1.00 24.99 C
ATOM 19 N6 A B 313 -52.724 2.034 -69.573 1.00 24.99 N
ATOM 20 N1 A B 313 -54.411 0.435 -69.935 1.00 24.99 N
ATOM 21 C2 A B 313 -54.961 -0.743 -69.607 1.00 24.99 C
ATOM 22 N3 A B 313 -54.550 -1.614 -68.689 1.00 24.99 N
ATOM 23 C4 A B 313 -53.432 -1.177 -68.067 1.00 24.99 C
ATOM 24 P C B 314 -53.459 -7.373 -65.906 1.00 16.91 P
ATOM 25 OP1 C B 314 -52.028 -7.722 -65.613 1.00 16.91 O
ATOM 26 OP2 C B 314 -54.068 -7.861 -67.157 1.00 16.91 O
ATOM 27 O5' C B 314 -54.394 -7.747 -64.667 1.00 16.91 O
TER
Atoms:
OP1: (-55.748,10.210,-77.222)
OP2: (-54.038,8.692,-76.062)
C3': (-58.302,5.946,-75.299)
C1': (-56.975,4.180,-76.099)
C5': (-57.517,7.569,-77.120)
O6: (-52.448,3.350,-72.218)
O4': (-56.929,5.224,-77.048)
C8: (-54.769,5.194,-75.333)
C2: (-55.401,1.543,-73.030)
C6: (-53.508,3.092,-72.804)
C5: (-54.163,3.811,-73.837)
C4: (-55.360,3.322,-74.338)
P: (-55.254,8.838,-76.902)
C4': (-57.982,6.187,-76.765)
C2': (-58.200,4.438,-75.211)
O2': (-59.337,3.830,-75.806)
N1: (-54.221,1.947,-72.464)
N2: (-55.904,0.406,-72.548)
N3: (-56.039,2.200,-73.979)
N7: (-53.804,4.988,-74.476)
N9: (-55.733,4.220,-75.314)
O5': (-56.431,7.964,-76.305)
O3': (-59.564,6.466,-74.902)
OP2: (-54.038,8.692,-76.062)
C3': (-58.302,5.946,-75.299)
C1': (-56.975,4.180,-76.099)
C5': (-57.517,7.569,-77.120)
O6: (-52.448,3.350,-72.218)
O4': (-56.929,5.224,-77.048)
C8: (-54.769,5.194,-75.333)
C2: (-55.401,1.543,-73.030)
C6: (-53.508,3.092,-72.804)
C5: (-54.163,3.811,-73.837)
C4: (-55.360,3.322,-74.338)
P: (-55.254,8.838,-76.902)
C4': (-57.982,6.187,-76.765)
C2': (-58.200,4.438,-75.211)
O2': (-59.337,3.830,-75.806)
N1: (-54.221,1.947,-72.464)
N2: (-55.904,0.406,-72.548)
N3: (-56.039,2.200,-73.979)
N7: (-53.804,4.988,-74.476)
N9: (-55.733,4.220,-75.314)
O5': (-56.431,7.964,-76.305)
O3': (-59.564,6.466,-74.902)
OP1: (-49.712,-4.141,-62.432)
OP2: (-48.878,-2.267,-63.920)
C3': (-52.571,-4.986,-65.249)
C1': (-53.078,-3.106,-66.484)
C5': (-52.425,-3.484,-63.220)
O4': (-53.629,-2.885,-65.199)
C8: (-51.671,-0.970,-66.761)
O2': (-51.530,-4.709,-67.428)
C6: (-53.294,0.855,-69.278)
C5: (-52.766,0.009,-68.300)
C4: (-53.432,-1.177,-68.067)
P: (-49.917,-2.809,-63.020)
C4': (-53.272,-3.999,-64.338)
C2': (-51.924,-4.066,-66.249)
C2: (-54.961,-0.743,-69.607)
N1: (-54.411,0.435,-69.935)
N3: (-54.550,-1.614,-68.689)
N6: (-52.724,2.034,-69.573)
N7: (-51.659,0.130,-67.480)
N9: (-52.714,-1.810,-67.069)
O5': (-51.332,-2.739,-63.723)
O3': (-53.551,-5.775,-65.928)
OP2: (-48.878,-2.267,-63.920)
C3': (-52.571,-4.986,-65.249)
C1': (-53.078,-3.106,-66.484)
C5': (-52.425,-3.484,-63.220)
O4': (-53.629,-2.885,-65.199)
C8: (-51.671,-0.970,-66.761)
O2': (-51.530,-4.709,-67.428)
C6: (-53.294,0.855,-69.278)
C5: (-52.766,0.009,-68.300)
C4: (-53.432,-1.177,-68.067)
P: (-49.917,-2.809,-63.020)
C4': (-53.272,-3.999,-64.338)
C2': (-51.924,-4.066,-66.249)
C2: (-54.961,-0.743,-69.607)
N1: (-54.411,0.435,-69.935)
N3: (-54.550,-1.614,-68.689)
N6: (-52.724,2.034,-69.573)
N7: (-51.659,0.130,-67.480)
N9: (-52.714,-1.810,-67.069)
O5': (-51.332,-2.739,-63.723)
O3': (-53.551,-5.775,-65.928)
Image (generated by PyMOL):