Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2PXD:B20:B31
Extra
PDB:
ATOM 1 O3' G A 19 82.614 -19.768 41.399 1.00 40.58 O
ATOM 2 P G A 20 81.875 -20.958 40.613 1.00 48.42 P
ATOM 3 OP1 G A 20 80.744 -20.297 39.931 1.00 35.69 O
ATOM 4 OP2 G A 20 81.621 -22.089 41.548 1.00 31.91 O
ATOM 5 O5' G A 20 82.909 -21.402 39.484 1.00 48.36 O
ATOM 6 C5' G A 20 83.062 -20.605 38.305 1.00 47.61 C
ATOM 7 C4' G A 20 84.243 -21.074 37.477 1.00 45.82 C
ATOM 8 O4' G A 20 85.458 -21.035 38.280 1.00 45.14 O
ATOM 9 C3' G A 20 84.206 -22.496 36.946 1.00 44.90 C
ATOM 10 O3' G A 20 83.428 -22.543 35.757 1.00 45.54 O
ATOM 11 C2' G A 20 85.681 -22.734 36.652 1.00 43.72 C
ATOM 12 O2' G A 20 86.094 -22.084 35.470 1.00 45.94 O
ATOM 13 C1' G A 20 86.341 -22.061 37.859 1.00 41.59 C
ATOM 14 N9 G A 20 86.497 -23.001 38.962 1.00 23.10 N
ATOM 15 C8 G A 20 85.708 -23.090 40.081 1.00 21.36 C
ATOM 16 N7 G A 20 86.029 -24.095 40.854 1.00 20.58 N
ATOM 17 C5 G A 20 87.111 -24.686 40.219 1.00 18.81 C
ATOM 18 C6 G A 20 87.872 -25.823 40.586 1.00 18.71 C
ATOM 19 O6 G A 20 87.734 -26.552 41.584 1.00 19.97 O
ATOM 20 N1 G A 20 88.875 -26.092 39.661 1.00 15.21 N
ATOM 21 C2 G A 20 89.115 -25.355 38.523 1.00 18.22 C
ATOM 22 N2 G A 20 90.117 -25.795 37.731 1.00 15.23 N
ATOM 23 N3 G A 20 88.416 -24.273 38.179 1.00 18.22 N
ATOM 24 C4 G A 20 87.430 -24.009 39.063 1.00 19.78 C
ATOM 25 P U A 21 82.905 -23.958 35.177 1.00 35.98 P
ATOM 26 OP1 U A 21 82.391 -23.634 33.825 1.00 34.91 O
ATOM 27 OP2 U A 21 82.025 -24.643 36.151 1.00 31.61 O
ATOM 28 O5' U A 21 84.210 -24.845 34.979 1.00 36.06 O
TER
ATOM 1 O3' A B 30 92.950 -37.280 41.462 1.00 55.32 O
ATOM 2 P A B 31 93.843 -36.472 42.518 1.00 44.33 P
ATOM 3 OP1 A B 31 95.072 -37.272 42.777 1.00 41.75 O
ATOM 4 OP2 A B 31 92.965 -36.072 43.644 1.00 38.73 O
ATOM 5 O5' A B 31 94.272 -35.164 41.726 1.00 40.61 O
ATOM 6 C5' A B 31 94.973 -35.292 40.506 1.00 35.94 C
ATOM 7 C4' A B 31 94.798 -34.061 39.662 1.00 32.19 C
ATOM 8 O4' A B 31 93.392 -33.749 39.513 1.00 29.51 O
ATOM 9 C3' A B 31 95.294 -32.756 40.242 1.00 32.78 C
ATOM 10 O3' A B 31 96.704 -32.668 40.192 1.00 35.36 O
ATOM 11 C2' A B 31 94.653 -31.765 39.288 1.00 28.83 C
ATOM 12 O2' A B 31 95.321 -31.770 38.051 1.00 30.77 O
ATOM 13 C1' A B 31 93.283 -32.404 39.079 1.00 26.69 C
ATOM 14 N9 A B 31 92.243 -31.711 39.831 1.00 17.59 N
ATOM 15 C8 A B 31 91.590 -32.057 40.987 1.00 14.72 C
ATOM 16 N7 A B 31 90.729 -31.148 41.391 1.00 13.08 N
ATOM 17 C5 A B 31 90.819 -30.151 40.426 1.00 10.87 C
ATOM 18 C6 A B 31 90.165 -28.917 40.279 1.00 11.36 C
ATOM 19 N6 A B 31 89.265 -28.463 41.150 1.00 12.54 N
ATOM 20 N1 A B 31 90.474 -28.157 39.200 1.00 9.16 N
ATOM 21 C2 A B 31 91.394 -28.616 38.343 1.00 10.27 C
ATOM 22 N3 A B 31 92.085 -29.762 38.383 1.00 12.10 N
ATOM 23 C4 A B 31 91.738 -30.487 39.461 1.00 11.89 C
ATOM 24 P G B 32 97.488 -31.959 41.396 1.00 35.59 P
ATOM 25 OP1 G B 32 98.908 -31.869 40.967 1.00 37.20 O
ATOM 26 OP2 G B 32 97.137 -32.666 42.656 1.00 34.76 O
ATOM 27 O5' G B 32 96.880 -30.488 41.457 1.00 32.02 O
TER
ATOM 2 P G A 20 81.875 -20.958 40.613 1.00 48.42 P
ATOM 3 OP1 G A 20 80.744 -20.297 39.931 1.00 35.69 O
ATOM 4 OP2 G A 20 81.621 -22.089 41.548 1.00 31.91 O
ATOM 5 O5' G A 20 82.909 -21.402 39.484 1.00 48.36 O
ATOM 6 C5' G A 20 83.062 -20.605 38.305 1.00 47.61 C
ATOM 7 C4' G A 20 84.243 -21.074 37.477 1.00 45.82 C
ATOM 8 O4' G A 20 85.458 -21.035 38.280 1.00 45.14 O
ATOM 9 C3' G A 20 84.206 -22.496 36.946 1.00 44.90 C
ATOM 10 O3' G A 20 83.428 -22.543 35.757 1.00 45.54 O
ATOM 11 C2' G A 20 85.681 -22.734 36.652 1.00 43.72 C
ATOM 12 O2' G A 20 86.094 -22.084 35.470 1.00 45.94 O
ATOM 13 C1' G A 20 86.341 -22.061 37.859 1.00 41.59 C
ATOM 14 N9 G A 20 86.497 -23.001 38.962 1.00 23.10 N
ATOM 15 C8 G A 20 85.708 -23.090 40.081 1.00 21.36 C
ATOM 16 N7 G A 20 86.029 -24.095 40.854 1.00 20.58 N
ATOM 17 C5 G A 20 87.111 -24.686 40.219 1.00 18.81 C
ATOM 18 C6 G A 20 87.872 -25.823 40.586 1.00 18.71 C
ATOM 19 O6 G A 20 87.734 -26.552 41.584 1.00 19.97 O
ATOM 20 N1 G A 20 88.875 -26.092 39.661 1.00 15.21 N
ATOM 21 C2 G A 20 89.115 -25.355 38.523 1.00 18.22 C
ATOM 22 N2 G A 20 90.117 -25.795 37.731 1.00 15.23 N
ATOM 23 N3 G A 20 88.416 -24.273 38.179 1.00 18.22 N
ATOM 24 C4 G A 20 87.430 -24.009 39.063 1.00 19.78 C
ATOM 25 P U A 21 82.905 -23.958 35.177 1.00 35.98 P
ATOM 26 OP1 U A 21 82.391 -23.634 33.825 1.00 34.91 O
ATOM 27 OP2 U A 21 82.025 -24.643 36.151 1.00 31.61 O
ATOM 28 O5' U A 21 84.210 -24.845 34.979 1.00 36.06 O
TER
ATOM 1 O3' A B 30 92.950 -37.280 41.462 1.00 55.32 O
ATOM 2 P A B 31 93.843 -36.472 42.518 1.00 44.33 P
ATOM 3 OP1 A B 31 95.072 -37.272 42.777 1.00 41.75 O
ATOM 4 OP2 A B 31 92.965 -36.072 43.644 1.00 38.73 O
ATOM 5 O5' A B 31 94.272 -35.164 41.726 1.00 40.61 O
ATOM 6 C5' A B 31 94.973 -35.292 40.506 1.00 35.94 C
ATOM 7 C4' A B 31 94.798 -34.061 39.662 1.00 32.19 C
ATOM 8 O4' A B 31 93.392 -33.749 39.513 1.00 29.51 O
ATOM 9 C3' A B 31 95.294 -32.756 40.242 1.00 32.78 C
ATOM 10 O3' A B 31 96.704 -32.668 40.192 1.00 35.36 O
ATOM 11 C2' A B 31 94.653 -31.765 39.288 1.00 28.83 C
ATOM 12 O2' A B 31 95.321 -31.770 38.051 1.00 30.77 O
ATOM 13 C1' A B 31 93.283 -32.404 39.079 1.00 26.69 C
ATOM 14 N9 A B 31 92.243 -31.711 39.831 1.00 17.59 N
ATOM 15 C8 A B 31 91.590 -32.057 40.987 1.00 14.72 C
ATOM 16 N7 A B 31 90.729 -31.148 41.391 1.00 13.08 N
ATOM 17 C5 A B 31 90.819 -30.151 40.426 1.00 10.87 C
ATOM 18 C6 A B 31 90.165 -28.917 40.279 1.00 11.36 C
ATOM 19 N6 A B 31 89.265 -28.463 41.150 1.00 12.54 N
ATOM 20 N1 A B 31 90.474 -28.157 39.200 1.00 9.16 N
ATOM 21 C2 A B 31 91.394 -28.616 38.343 1.00 10.27 C
ATOM 22 N3 A B 31 92.085 -29.762 38.383 1.00 12.10 N
ATOM 23 C4 A B 31 91.738 -30.487 39.461 1.00 11.89 C
ATOM 24 P G B 32 97.488 -31.959 41.396 1.00 35.59 P
ATOM 25 OP1 G B 32 98.908 -31.869 40.967 1.00 37.20 O
ATOM 26 OP2 G B 32 97.137 -32.666 42.656 1.00 34.76 O
ATOM 27 O5' G B 32 96.880 -30.488 41.457 1.00 32.02 O
TER
Atoms:
OP1: (80.744,-20.297,39.931)
OP2: (81.621,-22.089,41.548)
C3': (84.206,-22.496,36.946)
C1': (86.341,-22.061,37.859)
C5': (83.062,-20.605,38.305)
O6: (87.734,-26.552,41.584)
O4': (85.458,-21.035,38.280)
C8: (85.708,-23.090,40.081)
C2: (89.115,-25.355,38.523)
C6: (87.872,-25.823,40.586)
C5: (87.111,-24.686,40.219)
C4: (87.430,-24.009,39.063)
P: (81.875,-20.958,40.613)
C4': (84.243,-21.074,37.477)
C2': (85.681,-22.734,36.652)
O2': (86.094,-22.084,35.470)
N1: (88.875,-26.092,39.661)
N2: (90.117,-25.795,37.731)
N3: (88.416,-24.273,38.179)
N7: (86.029,-24.095,40.854)
N9: (86.497,-23.001,38.962)
O5': (82.909,-21.402,39.484)
O3': (83.428,-22.543,35.757)
OP2: (81.621,-22.089,41.548)
C3': (84.206,-22.496,36.946)
C1': (86.341,-22.061,37.859)
C5': (83.062,-20.605,38.305)
O6: (87.734,-26.552,41.584)
O4': (85.458,-21.035,38.280)
C8: (85.708,-23.090,40.081)
C2: (89.115,-25.355,38.523)
C6: (87.872,-25.823,40.586)
C5: (87.111,-24.686,40.219)
C4: (87.430,-24.009,39.063)
P: (81.875,-20.958,40.613)
C4': (84.243,-21.074,37.477)
C2': (85.681,-22.734,36.652)
O2': (86.094,-22.084,35.470)
N1: (88.875,-26.092,39.661)
N2: (90.117,-25.795,37.731)
N3: (88.416,-24.273,38.179)
N7: (86.029,-24.095,40.854)
N9: (86.497,-23.001,38.962)
O5': (82.909,-21.402,39.484)
O3': (83.428,-22.543,35.757)
OP1: (95.072,-37.272,42.777)
OP2: (92.965,-36.072,43.644)
C3': (95.294,-32.756,40.242)
C1': (93.283,-32.404,39.079)
C5': (94.973,-35.292,40.506)
O4': (93.392,-33.749,39.513)
C8: (91.590,-32.057,40.987)
O2': (95.321,-31.770,38.051)
C6: (90.165,-28.917,40.279)
C5: (90.819,-30.151,40.426)
C4: (91.738,-30.487,39.461)
P: (93.843,-36.472,42.518)
C4': (94.798,-34.061,39.662)
C2': (94.653,-31.765,39.288)
C2: (91.394,-28.616,38.343)
N1: (90.474,-28.157,39.200)
N3: (92.085,-29.762,38.383)
N6: (89.265,-28.463,41.150)
N7: (90.729,-31.148,41.391)
N9: (92.243,-31.711,39.831)
O5': (94.272,-35.164,41.726)
O3': (96.704,-32.668,40.192)
OP2: (92.965,-36.072,43.644)
C3': (95.294,-32.756,40.242)
C1': (93.283,-32.404,39.079)
C5': (94.973,-35.292,40.506)
O4': (93.392,-33.749,39.513)
C8: (91.590,-32.057,40.987)
O2': (95.321,-31.770,38.051)
C6: (90.165,-28.917,40.279)
C5: (90.819,-30.151,40.426)
C4: (91.738,-30.487,39.461)
P: (93.843,-36.472,42.518)
C4': (94.798,-34.061,39.662)
C2': (94.653,-31.765,39.288)
C2: (91.394,-28.616,38.343)
N1: (90.474,-28.157,39.200)
N3: (92.085,-29.762,38.383)
N6: (89.265,-28.463,41.150)
N7: (90.729,-31.148,41.391)
N9: (92.243,-31.711,39.831)
O5': (94.272,-35.164,41.726)
O3': (96.704,-32.668,40.192)
Image (generated by PyMOL):