ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:61639:61750

Extra

PDB:
ATOM 1 O3' C A1638 210.141 -1.048 245.862 1.00 51.04 O
ATOM 2 P G A1639 209.905 0.364 246.546 1.00 58.61 P
ATOM 3 OP1 G A1639 208.460 0.646 246.424 1.00 58.38 O
ATOM 4 OP2 G A1639 210.886 1.322 245.956 1.00 58.46 O
ATOM 5 O5' G A1639 210.285 0.079 248.059 1.00 58.85 O
ATOM 6 C5' G A1639 209.614 -0.922 248.808 1.00 59.08 C
ATOM 7 C4' G A1639 210.298 -1.185 250.130 1.00 59.36 C
ATOM 8 O4' G A1639 211.553 -1.855 249.897 1.00 59.66 O
ATOM 9 C3' G A1639 210.694 0.031 250.966 1.00 59.20 C
ATOM 10 O3' G A1639 209.610 0.619 251.674 1.00 59.02 O
ATOM 11 C2' G A1639 211.740 -0.570 251.874 1.00 59.59 C
ATOM 12 O2' G A1639 211.123 -1.382 252.862 1.00 59.84 O
ATOM 13 C1' G A1639 212.470 -1.491 250.901 1.00 59.81 C
ATOM 14 N9 G A1639 213.638 -0.828 250.281 1.00 59.73 N
ATOM 15 C8 G A1639 213.756 -0.215 249.071 1.00 59.47 C
ATOM 16 N7 G A1639 214.923 0.308 248.837 1.00 59.49 N
ATOM 17 C5 G A1639 215.623 -0.004 249.974 1.00 59.79 C
ATOM 18 C6 G A1639 216.960 0.273 250.325 1.00 59.98 C
ATOM 19 O6 G A1639 217.834 0.873 249.686 1.00 59.91 O
ATOM 20 N1 G A1639 217.277 -0.238 251.564 1.00 60.31 N
ATOM 21 C2 G A1639 216.417 -0.907 252.365 1.00 60.44 C
ATOM 22 N2 G A1639 216.907 -1.316 253.545 1.00 60.79 N
ATOM 23 N3 G A1639 215.169 -1.153 252.045 1.00 60.26 N
ATOM 24 C4 G A1639 214.849 -0.685 250.852 1.00 59.94 C
ATOM 25 P C A1640 209.396 2.226 251.695 1.00 59.68 P
ATOM 26 OP1 C A1640 207.944 2.452 251.741 1.00 59.49 O
ATOM 27 OP2 C A1640 210.176 2.804 250.569 1.00 59.52 O
ATOM 28 O5' C A1640 210.043 2.662 253.082 1.00 59.82 O
TER

ATOM 1 O3' A B1749 228.143 -0.595 251.238 1.00 61.85 O
ATOM 2 P A B1750 227.144 -1.842 251.179 0.51 69.04 P
ATOM 3 OP1 A B1750 227.932 -2.993 250.670 0.51 69.54 O
ATOM 4 OP2 A B1750 225.925 -1.403 250.421 0.51 68.52 O
ATOM 5 O5' A B1750 226.785 -2.061 252.712 0.51 69.23 O
ATOM 6 C5' A B1750 226.621 -3.352 253.266 0.51 69.67 C
ATOM 7 C4' A B1750 225.664 -3.299 254.417 0.51 69.59 C
ATOM 8 O4' A B1750 225.273 -1.918 254.636 0.51 69.10 O
ATOM 9 C3' A B1750 224.356 -4.045 254.210 0.51 69.48 C
ATOM 10 O3' A B1750 224.442 -5.392 254.605 0.51 70.00 O
ATOM 11 C2' A B1750 223.364 -3.241 255.034 0.51 69.12 C
ATOM 12 O2' A B1750 223.489 -3.555 256.412 0.51 69.47 O
ATOM 13 C1' A B1750 223.882 -1.830 254.820 0.51 68.77 C
ATOM 14 N9 A B1750 223.287 -1.200 253.621 0.51 68.27 N
ATOM 15 C8 A B1750 223.865 -0.902 252.403 0.51 68.15 C
ATOM 16 N7 A B1750 223.052 -0.335 251.550 0.51 67.69 N
ATOM 17 C5 A B1750 221.858 -0.256 252.257 0.51 67.51 C
ATOM 18 C6 A B1750 220.601 0.252 251.929 0.51 67.08 C
ATOM 19 N6 A B1750 220.302 0.794 250.759 0.51 66.73 N
ATOM 20 N1 A B1750 219.641 0.186 252.865 0.51 67.03 N
ATOM 21 C2 A B1750 219.921 -0.361 254.057 0.51 67.40 C
ATOM 22 N3 A B1750 221.060 -0.874 254.500 0.51 67.83 N
ATOM 23 C4 A B1750 221.989 -0.782 253.531 0.51 67.86 C
ATOM 24 P G B1751 223.988 -6.560 253.615 1.00 68.98 P
ATOM 25 OP1 G B1751 224.522 -7.819 254.164 1.00 69.64 O
ATOM 26 OP2 G B1751 224.371 -6.161 252.236 1.00 68.74 O
ATOM 27 O5' G B1751 222.412 -6.555 253.761 1.00 68.63 O
TER

Atoms:
OP1: (208.460,0.646,246.424)
OP2: (210.886,1.322,245.956)
C3': (210.694,0.031,250.966)
C1': (212.470,-1.491,250.901)
C5': (209.614,-0.922,248.808)
O6: (217.834,0.873,249.686)
O4': (211.553,-1.855,249.897)
C8: (213.756,-0.215,249.071)
C2: (216.417,-0.907,252.365)
C6: (216.960,0.273,250.325)
C5: (215.623,-0.004,249.974)
C4: (214.849,-0.685,250.852)
P: (209.905,0.364,246.546)
C4': (210.298,-1.185,250.130)
C2': (211.740,-0.570,251.874)
O2': (211.123,-1.382,252.862)
N1: (217.277,-0.238,251.564)
N2: (216.907,-1.316,253.545)
N3: (215.169,-1.153,252.045)
N7: (214.923,0.308,248.837)
N9: (213.638,-0.828,250.281)
O5': (210.285,0.079,248.059)
O3': (209.610,0.619,251.674)
OP1: (227.932,-2.993,250.670)
OP2: (225.925,-1.403,250.421)
C3': (224.356,-4.045,254.210)
C1': (223.882,-1.830,254.820)
C5': (226.621,-3.352,253.266)
O4': (225.273,-1.918,254.636)
C8: (223.865,-0.902,252.403)
O2': (223.489,-3.555,256.412)
C6: (220.601,0.252,251.929)
C5: (221.858,-0.256,252.257)
C4: (221.989,-0.782,253.531)
P: (227.144,-1.842,251.179)
C4': (225.664,-3.299,254.417)
C2': (223.364,-3.241,255.034)
C2: (219.921,-0.361,254.057)
N1: (219.641,0.186,252.865)
N3: (221.060,-0.874,254.500)
N6: (220.302,0.794,250.759)
N7: (223.052,-0.335,251.550)
N9: (223.287,-1.200,253.621)
O5': (226.785,-2.061,252.712)
O3': (224.442,-5.392,254.605)
Image (generated by PyMOL):
PyMOL image
show in jmol