ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIL:A140:A161

Extra

PDB:
ATOM 1 O3' U A 139 43.063 18.603 22.158 1.00 18.56 O
ATOM 2 P G A 140 43.876 17.260 21.819 1.00 17.36 P
ATOM 3 OP1 G A 140 44.662 16.917 23.025 1.00 16.42 O
ATOM 4 OP2 G A 140 44.549 17.389 20.507 1.00 18.29 O
ATOM 5 O5' G A 140 42.709 16.185 21.625 1.00 17.33 O
ATOM 6 C5' G A 140 41.871 15.849 22.719 1.00 17.08 C
ATOM 7 C4' G A 140 40.549 15.286 22.237 1.00 16.89 C
ATOM 8 O4' G A 140 39.884 16.238 21.366 1.00 16.37 O
ATOM 9 C3' G A 140 40.667 14.048 21.368 1.00 16.90 C
ATOM 10 O3' G A 140 40.924 12.891 22.155 1.00 16.85 O
ATOM 11 C2' G A 140 39.297 14.038 20.696 1.00 16.56 C
ATOM 12 O2' G A 140 38.261 13.568 21.536 1.00 17.02 O
ATOM 13 C1' G A 140 39.124 15.529 20.403 1.00 16.87 C
ATOM 14 N9 G A 140 39.579 15.880 19.056 1.00 17.19 N
ATOM 15 C8 G A 140 40.746 16.514 18.694 1.00 16.92 C
ATOM 16 N7 G A 140 40.870 16.682 17.406 1.00 17.02 N
ATOM 17 C5 G A 140 39.715 16.116 16.875 1.00 17.24 C
ATOM 18 C6 G A 140 39.283 15.988 15.528 1.00 17.53 C
ATOM 19 O6 G A 140 39.857 16.370 14.501 1.00 17.19 O
ATOM 20 N1 G A 140 38.047 15.344 15.429 1.00 16.87 N
ATOM 21 C2 G A 140 37.319 14.879 16.501 1.00 17.31 C
ATOM 22 N2 G A 140 36.150 14.285 16.225 1.00 17.00 N
ATOM 23 N3 G A 140 37.712 14.990 17.766 1.00 17.14 N
ATOM 24 C4 G A 140 38.913 15.614 17.879 1.00 17.28 C
ATOM 25 P U A 141 41.956 11.787 21.625 1.00 17.23 P
ATOM 26 OP1 U A 141 42.180 10.822 22.723 1.00 16.52 O
ATOM 27 OP2 U A 141 43.106 12.470 20.990 1.00 16.91 O
ATOM 28 O5' U A 141 41.138 11.089 20.444 1.00 16.79 O
TER

ATOM 1 O3' G B 160 35.550 13.667 4.694 1.00 20.85 O
ATOM 2 P A B 161 34.388 14.702 5.065 1.00 21.47 P
ATOM 3 OP1 A B 161 33.508 14.794 3.883 1.00 21.60 O
ATOM 4 OP2 A B 161 34.987 15.930 5.635 1.00 21.46 O
ATOM 5 O5' A B 161 33.601 13.971 6.250 1.00 21.69 O
ATOM 6 C5' A B 161 33.025 12.672 6.079 1.00 21.85 C
ATOM 7 C4' A B 161 32.783 12.018 7.434 1.00 21.57 C
ATOM 8 O4' A B 161 33.919 12.218 8.321 1.00 21.19 O
ATOM 9 C3' A B 161 31.583 12.543 8.213 1.00 21.79 C
ATOM 10 O3' A B 161 31.070 11.491 9.016 1.00 22.27 O
ATOM 11 C2' A B 161 32.213 13.634 9.077 1.00 21.46 C
ATOM 12 O2' A B 161 31.449 13.969 10.218 1.00 21.82 O
ATOM 13 C1' A B 161 33.516 12.941 9.469 1.00 20.55 C
ATOM 14 N9 A B 161 34.580 13.868 9.842 1.00 20.36 N
ATOM 15 C8 A B 161 35.059 14.903 9.090 1.00 20.36 C
ATOM 16 N7 A B 161 36.017 15.582 9.673 1.00 19.77 N
ATOM 17 C5 A B 161 36.178 14.951 10.893 1.00 19.77 C
ATOM 18 C6 A B 161 37.045 15.195 11.979 1.00 19.44 C
ATOM 19 N6 A B 161 37.942 16.188 11.989 1.00 18.49 N
ATOM 20 N1 A B 161 36.951 14.373 13.054 1.00 19.81 N
ATOM 21 C2 A B 161 36.049 13.377 13.039 1.00 19.61 C
ATOM 22 N3 A B 161 35.184 13.056 12.072 1.00 19.73 N
ATOM 23 C4 A B 161 35.297 13.888 11.018 1.00 19.72 C
ATOM 24 P G B 162 29.515 11.111 9.003 1.00 22.82 P
ATOM 25 OP1 G B 162 29.391 9.842 8.259 1.00 22.93 O
ATOM 26 OP2 G B 162 28.729 12.297 8.586 1.00 22.87 O
ATOM 27 O5' G B 162 29.168 10.784 10.524 1.00 21.45 O
TER

Atoms:
OP1: (44.662,16.917,23.025)
OP2: (44.549,17.389,20.507)
C3': (40.667,14.048,21.368)
C1': (39.124,15.529,20.403)
C5': (41.871,15.849,22.719)
O6: (39.857,16.370,14.501)
O4': (39.884,16.238,21.366)
C8: (40.746,16.514,18.694)
C2: (37.319,14.879,16.501)
C6: (39.283,15.988,15.528)
C5: (39.715,16.116,16.875)
C4: (38.913,15.614,17.879)
P: (43.876,17.260,21.819)
C4': (40.549,15.286,22.237)
C2': (39.297,14.038,20.696)
O2': (38.261,13.568,21.536)
N1: (38.047,15.344,15.429)
N2: (36.150,14.285,16.225)
N3: (37.712,14.990,17.766)
N7: (40.870,16.682,17.406)
N9: (39.579,15.880,19.056)
O5': (42.709,16.185,21.625)
O3': (40.924,12.891,22.155)
OP1: (33.508,14.794,3.883)
OP2: (34.987,15.930,5.635)
C3': (31.583,12.543,8.213)
C1': (33.516,12.941,9.469)
C5': (33.025,12.672,6.079)
O4': (33.919,12.218,8.321)
C8: (35.059,14.903,9.090)
O2': (31.449,13.969,10.218)
C6: (37.045,15.195,11.979)
C5: (36.178,14.951,10.893)
C4: (35.297,13.888,11.018)
P: (34.388,14.702,5.065)
C4': (32.783,12.018,7.434)
C2': (32.213,13.634,9.077)
C2: (36.049,13.377,13.039)
N1: (36.951,14.373,13.054)
N3: (35.184,13.056,12.072)
N6: (37.942,16.188,11.989)
N7: (36.017,15.582,9.673)
N9: (34.580,13.868,9.842)
O5': (33.601,13.971,6.250)
O3': (31.070,11.491,9.016)
Image (generated by PyMOL):
PyMOL image
show in jmol