Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0277:0351
Extra
PDB:
ATOM 1 O3' A A 276 69.448 120.349 2.415 1.00103.83 O
ATOM 2 P G A 277 68.171 120.955 3.192 1.00104.20 P
ATOM 3 OP1 G A 277 68.692 121.850 4.259 1.00104.38 O
ATOM 4 OP2 G A 277 67.248 119.842 3.551 1.00102.55 O
ATOM 5 O5' G A 277 67.443 121.857 2.096 1.00102.81 O
ATOM 6 C5' G A 277 68.133 122.959 1.469 1.00100.18 C
ATOM 7 C4' G A 277 67.521 123.265 0.121 1.00 98.05 C
ATOM 8 O4' G A 277 67.569 122.066 -0.701 1.00 96.90 O
ATOM 9 C3' G A 277 66.046 123.635 0.119 1.00 97.18 C
ATOM 10 O3' G A 277 65.801 124.994 0.458 1.00 96.86 O
ATOM 11 C2' G A 277 65.640 123.307 -1.308 1.00 95.93 C
ATOM 12 O2' G A 277 66.047 124.286 -2.244 1.00 95.21 O
ATOM 13 C1' G A 277 66.417 122.009 -1.531 1.00 95.53 C
ATOM 14 N9 G A 277 65.612 120.857 -1.133 1.00 94.11 N
ATOM 15 C8 G A 277 65.766 120.057 -0.024 1.00 93.69 C
ATOM 16 N7 G A 277 64.847 119.135 0.074 1.00 92.68 N
ATOM 17 C5 G A 277 64.045 119.333 -1.041 1.00 92.89 C
ATOM 18 C6 G A 277 62.883 118.648 -1.472 1.00 92.81 C
ATOM 19 O6 G A 277 62.297 117.700 -0.933 1.00 92.35 O
ATOM 20 N1 G A 277 62.396 119.176 -2.661 1.00 92.84 N
ATOM 21 C2 G A 277 62.943 120.229 -3.345 1.00 93.05 C
ATOM 22 N2 G A 277 62.325 120.592 -4.475 1.00 93.67 N
ATOM 23 N3 G A 277 64.017 120.880 -2.952 1.00 93.43 N
ATOM 24 C4 G A 277 64.513 120.383 -1.801 1.00 93.46 C
ATOM 25 P C A 278 64.349 125.420 1.003 1.00 97.26 P
ATOM 26 OP1 C A 278 64.438 126.840 1.439 1.00 97.52 O
ATOM 27 OP2 C A 278 63.885 124.382 1.967 1.00 96.75 O
ATOM 28 O5' C A 278 63.418 125.351 -0.288 1.00 95.40 O
TER
ATOM 1 O3' G B 350 52.778 115.098 -6.790 1.00100.26 O
ATOM 2 P A B 351 54.001 114.347 -7.518 1.00100.45 P
ATOM 3 OP1 A B 351 53.456 113.735 -8.756 1.00100.70 O
ATOM 4 OP2 A B 351 54.702 113.490 -6.522 1.00100.55 O
ATOM 5 O5' A B 351 54.994 115.523 -7.930 1.00 99.95 O
ATOM 6 C5' A B 351 54.614 116.515 -8.904 1.00100.36 C
ATOM 7 C4' A B 351 55.554 117.695 -8.834 1.00100.44 C
ATOM 8 O4' A B 351 55.504 118.244 -7.491 1.00 99.89 O
ATOM 9 C3' A B 351 57.025 117.373 -9.056 1.00100.32 C
ATOM 10 O3' A B 351 57.366 117.352 -10.438 1.00101.54 O
ATOM 11 C2' A B 351 57.722 118.493 -8.299 1.00100.10 C
ATOM 12 O2' A B 351 57.756 119.712 -9.013 1.00 99.94 O
ATOM 13 C1' A B 351 56.806 118.633 -7.083 1.00 99.87 C
ATOM 14 N9 A B 351 57.217 117.755 -5.987 1.00 99.62 N
ATOM 15 C8 A B 351 56.660 116.560 -5.590 1.00 99.66 C
ATOM 16 N7 A B 351 57.269 116.006 -4.572 1.00 99.42 N
ATOM 17 C5 A B 351 58.295 116.892 -4.276 1.00 99.41 C
ATOM 18 C6 A B 351 59.301 116.881 -3.297 1.00 99.28 C
ATOM 19 N6 A B 351 59.454 115.907 -2.398 1.00 98.96 N
ATOM 20 N1 A B 351 60.160 117.922 -3.273 1.00 99.41 N
ATOM 21 C2 A B 351 60.011 118.899 -4.178 1.00 99.16 C
ATOM 22 N3 A B 351 59.113 119.021 -5.145 1.00 99.01 N
ATOM 23 C4 A B 351 58.273 117.974 -5.139 1.00 99.42 C
ATOM 24 P C B 352 58.793 116.772 -10.901 1.00102.38 P
ATOM 25 OP1 C B 352 58.868 116.949 -12.378 1.00102.31 O
ATOM 26 OP2 C B 352 58.981 115.418 -10.315 1.00101.61 O
ATOM 27 O5' C B 352 59.846 117.760 -10.228 1.00100.80 O
TER
ATOM 2 P G A 277 68.171 120.955 3.192 1.00104.20 P
ATOM 3 OP1 G A 277 68.692 121.850 4.259 1.00104.38 O
ATOM 4 OP2 G A 277 67.248 119.842 3.551 1.00102.55 O
ATOM 5 O5' G A 277 67.443 121.857 2.096 1.00102.81 O
ATOM 6 C5' G A 277 68.133 122.959 1.469 1.00100.18 C
ATOM 7 C4' G A 277 67.521 123.265 0.121 1.00 98.05 C
ATOM 8 O4' G A 277 67.569 122.066 -0.701 1.00 96.90 O
ATOM 9 C3' G A 277 66.046 123.635 0.119 1.00 97.18 C
ATOM 10 O3' G A 277 65.801 124.994 0.458 1.00 96.86 O
ATOM 11 C2' G A 277 65.640 123.307 -1.308 1.00 95.93 C
ATOM 12 O2' G A 277 66.047 124.286 -2.244 1.00 95.21 O
ATOM 13 C1' G A 277 66.417 122.009 -1.531 1.00 95.53 C
ATOM 14 N9 G A 277 65.612 120.857 -1.133 1.00 94.11 N
ATOM 15 C8 G A 277 65.766 120.057 -0.024 1.00 93.69 C
ATOM 16 N7 G A 277 64.847 119.135 0.074 1.00 92.68 N
ATOM 17 C5 G A 277 64.045 119.333 -1.041 1.00 92.89 C
ATOM 18 C6 G A 277 62.883 118.648 -1.472 1.00 92.81 C
ATOM 19 O6 G A 277 62.297 117.700 -0.933 1.00 92.35 O
ATOM 20 N1 G A 277 62.396 119.176 -2.661 1.00 92.84 N
ATOM 21 C2 G A 277 62.943 120.229 -3.345 1.00 93.05 C
ATOM 22 N2 G A 277 62.325 120.592 -4.475 1.00 93.67 N
ATOM 23 N3 G A 277 64.017 120.880 -2.952 1.00 93.43 N
ATOM 24 C4 G A 277 64.513 120.383 -1.801 1.00 93.46 C
ATOM 25 P C A 278 64.349 125.420 1.003 1.00 97.26 P
ATOM 26 OP1 C A 278 64.438 126.840 1.439 1.00 97.52 O
ATOM 27 OP2 C A 278 63.885 124.382 1.967 1.00 96.75 O
ATOM 28 O5' C A 278 63.418 125.351 -0.288 1.00 95.40 O
TER
ATOM 1 O3' G B 350 52.778 115.098 -6.790 1.00100.26 O
ATOM 2 P A B 351 54.001 114.347 -7.518 1.00100.45 P
ATOM 3 OP1 A B 351 53.456 113.735 -8.756 1.00100.70 O
ATOM 4 OP2 A B 351 54.702 113.490 -6.522 1.00100.55 O
ATOM 5 O5' A B 351 54.994 115.523 -7.930 1.00 99.95 O
ATOM 6 C5' A B 351 54.614 116.515 -8.904 1.00100.36 C
ATOM 7 C4' A B 351 55.554 117.695 -8.834 1.00100.44 C
ATOM 8 O4' A B 351 55.504 118.244 -7.491 1.00 99.89 O
ATOM 9 C3' A B 351 57.025 117.373 -9.056 1.00100.32 C
ATOM 10 O3' A B 351 57.366 117.352 -10.438 1.00101.54 O
ATOM 11 C2' A B 351 57.722 118.493 -8.299 1.00100.10 C
ATOM 12 O2' A B 351 57.756 119.712 -9.013 1.00 99.94 O
ATOM 13 C1' A B 351 56.806 118.633 -7.083 1.00 99.87 C
ATOM 14 N9 A B 351 57.217 117.755 -5.987 1.00 99.62 N
ATOM 15 C8 A B 351 56.660 116.560 -5.590 1.00 99.66 C
ATOM 16 N7 A B 351 57.269 116.006 -4.572 1.00 99.42 N
ATOM 17 C5 A B 351 58.295 116.892 -4.276 1.00 99.41 C
ATOM 18 C6 A B 351 59.301 116.881 -3.297 1.00 99.28 C
ATOM 19 N6 A B 351 59.454 115.907 -2.398 1.00 98.96 N
ATOM 20 N1 A B 351 60.160 117.922 -3.273 1.00 99.41 N
ATOM 21 C2 A B 351 60.011 118.899 -4.178 1.00 99.16 C
ATOM 22 N3 A B 351 59.113 119.021 -5.145 1.00 99.01 N
ATOM 23 C4 A B 351 58.273 117.974 -5.139 1.00 99.42 C
ATOM 24 P C B 352 58.793 116.772 -10.901 1.00102.38 P
ATOM 25 OP1 C B 352 58.868 116.949 -12.378 1.00102.31 O
ATOM 26 OP2 C B 352 58.981 115.418 -10.315 1.00101.61 O
ATOM 27 O5' C B 352 59.846 117.760 -10.228 1.00100.80 O
TER
Atoms:
OP1: (68.692,121.850,4.259)
OP2: (67.248,119.842,3.551)
C3': (66.046,123.635,0.119)
C1': (66.417,122.009,-1.531)
C5': (68.133,122.959,1.469)
O6: (62.297,117.700,-0.933)
O4': (67.569,122.066,-0.701)
C8: (65.766,120.057,-0.024)
C2: (62.943,120.229,-3.345)
C6: (62.883,118.648,-1.472)
C5: (64.045,119.333,-1.041)
C4: (64.513,120.383,-1.801)
P: (68.171,120.955,3.192)
C4': (67.521,123.265,0.121)
C2': (65.640,123.307,-1.308)
O2': (66.047,124.286,-2.244)
N1: (62.396,119.176,-2.661)
N2: (62.325,120.592,-4.475)
N3: (64.017,120.880,-2.952)
N7: (64.847,119.135,0.074)
N9: (65.612,120.857,-1.133)
O5': (67.443,121.857,2.096)
O3': (65.801,124.994,0.458)
OP2: (67.248,119.842,3.551)
C3': (66.046,123.635,0.119)
C1': (66.417,122.009,-1.531)
C5': (68.133,122.959,1.469)
O6: (62.297,117.700,-0.933)
O4': (67.569,122.066,-0.701)
C8: (65.766,120.057,-0.024)
C2: (62.943,120.229,-3.345)
C6: (62.883,118.648,-1.472)
C5: (64.045,119.333,-1.041)
C4: (64.513,120.383,-1.801)
P: (68.171,120.955,3.192)
C4': (67.521,123.265,0.121)
C2': (65.640,123.307,-1.308)
O2': (66.047,124.286,-2.244)
N1: (62.396,119.176,-2.661)
N2: (62.325,120.592,-4.475)
N3: (64.017,120.880,-2.952)
N7: (64.847,119.135,0.074)
N9: (65.612,120.857,-1.133)
O5': (67.443,121.857,2.096)
O3': (65.801,124.994,0.458)
OP1: (53.456,113.735,-8.756)
OP2: (54.702,113.490,-6.522)
C3': (57.025,117.373,-9.056)
C1': (56.806,118.633,-7.083)
C5': (54.614,116.515,-8.904)
O4': (55.504,118.244,-7.491)
C8: (56.660,116.560,-5.590)
O2': (57.756,119.712,-9.013)
C6: (59.301,116.881,-3.297)
C5: (58.295,116.892,-4.276)
C4: (58.273,117.974,-5.139)
P: (54.001,114.347,-7.518)
C4': (55.554,117.695,-8.834)
C2': (57.722,118.493,-8.299)
C2: (60.011,118.899,-4.178)
N1: (60.160,117.922,-3.273)
N3: (59.113,119.021,-5.145)
N6: (59.454,115.907,-2.398)
N7: (57.269,116.006,-4.572)
N9: (57.217,117.755,-5.987)
O5': (54.994,115.523,-7.930)
O3': (57.366,117.352,-10.438)
OP2: (54.702,113.490,-6.522)
C3': (57.025,117.373,-9.056)
C1': (56.806,118.633,-7.083)
C5': (54.614,116.515,-8.904)
O4': (55.504,118.244,-7.491)
C8: (56.660,116.560,-5.590)
O2': (57.756,119.712,-9.013)
C6: (59.301,116.881,-3.297)
C5: (58.295,116.892,-4.276)
C4: (58.273,117.974,-5.139)
P: (54.001,114.347,-7.518)
C4': (55.554,117.695,-8.834)
C2': (57.722,118.493,-8.299)
C2: (60.011,118.899,-4.178)
N1: (60.160,117.922,-3.273)
N3: (59.113,119.021,-5.145)
N6: (59.454,115.907,-2.398)
N7: (57.269,116.006,-4.572)
N9: (57.217,117.755,-5.987)
O5': (54.994,115.523,-7.930)
O3': (57.366,117.352,-10.438)
Image (generated by PyMOL):