Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:Y9:Y37
Extra
PDB:
ATOM 1 O3' G A 8 16.300 2.247 58.567 1.00 34.45 O
ATOM 2 P G A 9 15.244 1.899 57.413 1.00 34.30 P
ATOM 3 OP1 G A 9 13.894 1.918 58.019 1.00 34.13 O
ATOM 4 OP2 G A 9 15.722 0.705 56.680 1.00 34.26 O
ATOM 5 O5' G A 9 15.363 3.157 56.439 1.00 33.40 O
ATOM 6 C5' G A 9 14.916 4.426 56.882 1.00 32.99 C
ATOM 7 C4' G A 9 15.282 5.486 55.862 1.00 32.49 C
ATOM 8 O4' G A 9 16.725 5.590 55.766 1.00 32.74 O
ATOM 9 C3' G A 9 14.826 5.179 54.446 1.00 32.85 C
ATOM 10 O3' G A 9 13.483 5.625 54.263 1.00 33.31 O
ATOM 11 C2' G A 9 15.812 6.006 53.630 1.00 32.62 C
ATOM 12 O2' G A 9 15.449 7.374 53.621 1.00 32.54 O
ATOM 13 C1' G A 9 17.103 5.813 54.421 1.00 32.13 C
ATOM 14 N9 G A 9 17.944 4.691 54.000 1.00 31.64 N
ATOM 15 C8 G A 9 17.759 3.357 54.282 1.00 31.52 C
ATOM 16 N7 G A 9 18.691 2.586 53.789 1.00 31.69 N
ATOM 17 C5 G A 9 19.552 3.465 53.145 1.00 31.07 C
ATOM 18 C6 G A 9 20.743 3.212 52.423 1.00 31.20 C
ATOM 19 O6 G A 9 21.291 2.123 52.202 1.00 31.45 O
ATOM 20 N1 G A 9 21.307 4.385 51.927 1.00 30.57 N
ATOM 21 C2 G A 9 20.787 5.644 52.107 1.00 30.77 C
ATOM 22 N2 G A 9 21.473 6.658 51.558 1.00 30.93 N
ATOM 23 N3 G A 9 19.673 5.895 52.780 1.00 30.59 N
ATOM 24 C4 G A 9 19.108 4.762 53.267 1.00 31.05 C
ATOM 25 P U A 10 12.475 4.790 53.343 1.00 33.81 P
ATOM 26 OP1 U A 10 11.123 5.367 53.515 1.00 34.80 O
ATOM 27 OP2 U A 10 12.702 3.354 53.608 1.00 34.10 O
ATOM 28 O5' U A 10 12.988 5.099 51.860 1.00 34.28 O
TER
ATOM 1 O3' U B 36 30.925 -0.595 47.145 1.00 45.18 O
ATOM 2 P A B 37 30.658 0.563 48.225 1.00 44.49 P
ATOM 3 OP1 A B 37 31.950 0.862 48.882 1.00 44.69 O
ATOM 4 OP2 A B 37 29.495 0.170 49.050 1.00 44.32 O
ATOM 5 O5' A B 37 30.240 1.823 47.332 1.00 43.32 O
ATOM 6 C5' A B 37 30.995 3.030 47.380 1.00 40.94 C
ATOM 7 C4' A B 37 30.108 4.219 47.055 1.00 39.16 C
ATOM 8 O4' A B 37 28.813 3.745 46.605 1.00 38.42 O
ATOM 9 C3' A B 37 29.804 5.135 48.232 1.00 37.91 C
ATOM 10 O3' A B 37 30.804 6.137 48.328 1.00 37.64 O
ATOM 11 C2' A B 37 28.466 5.733 47.819 1.00 37.52 C
ATOM 12 O2' A B 37 28.615 6.769 46.866 1.00 37.30 O
ATOM 13 C1' A B 37 27.783 4.534 47.174 1.00 36.93 C
ATOM 14 N9 A B 37 27.011 3.712 48.104 1.00 36.16 N
ATOM 15 C8 A B 37 27.316 2.452 48.538 1.00 35.88 C
ATOM 16 N7 A B 37 26.436 1.949 49.369 1.00 35.33 N
ATOM 17 C5 A B 37 25.485 2.948 49.491 1.00 35.17 C
ATOM 18 C6 A B 37 24.290 3.035 50.234 1.00 35.05 C
ATOM 19 N6 A B 37 23.846 2.053 51.025 1.00 35.45 N
ATOM 20 N1 A B 37 23.571 4.172 50.134 1.00 34.77 N
ATOM 21 C2 A B 37 24.023 5.151 49.341 1.00 35.20 C
ATOM 22 N3 A B 37 25.129 5.186 48.597 1.00 34.57 N
ATOM 23 C4 A B 37 25.822 4.042 48.717 1.00 35.29 C
ATOM 24 P C B 38 31.371 6.594 49.751 1.00 37.04 P
ATOM 25 OP1 C B 38 32.501 7.516 49.503 1.00 37.51 O
ATOM 26 OP2 C B 38 31.567 5.381 50.576 1.00 37.38 O
ATOM 27 O5' C B 38 30.156 7.421 50.384 1.00 36.98 O
TER
ATOM 2 P G A 9 15.244 1.899 57.413 1.00 34.30 P
ATOM 3 OP1 G A 9 13.894 1.918 58.019 1.00 34.13 O
ATOM 4 OP2 G A 9 15.722 0.705 56.680 1.00 34.26 O
ATOM 5 O5' G A 9 15.363 3.157 56.439 1.00 33.40 O
ATOM 6 C5' G A 9 14.916 4.426 56.882 1.00 32.99 C
ATOM 7 C4' G A 9 15.282 5.486 55.862 1.00 32.49 C
ATOM 8 O4' G A 9 16.725 5.590 55.766 1.00 32.74 O
ATOM 9 C3' G A 9 14.826 5.179 54.446 1.00 32.85 C
ATOM 10 O3' G A 9 13.483 5.625 54.263 1.00 33.31 O
ATOM 11 C2' G A 9 15.812 6.006 53.630 1.00 32.62 C
ATOM 12 O2' G A 9 15.449 7.374 53.621 1.00 32.54 O
ATOM 13 C1' G A 9 17.103 5.813 54.421 1.00 32.13 C
ATOM 14 N9 G A 9 17.944 4.691 54.000 1.00 31.64 N
ATOM 15 C8 G A 9 17.759 3.357 54.282 1.00 31.52 C
ATOM 16 N7 G A 9 18.691 2.586 53.789 1.00 31.69 N
ATOM 17 C5 G A 9 19.552 3.465 53.145 1.00 31.07 C
ATOM 18 C6 G A 9 20.743 3.212 52.423 1.00 31.20 C
ATOM 19 O6 G A 9 21.291 2.123 52.202 1.00 31.45 O
ATOM 20 N1 G A 9 21.307 4.385 51.927 1.00 30.57 N
ATOM 21 C2 G A 9 20.787 5.644 52.107 1.00 30.77 C
ATOM 22 N2 G A 9 21.473 6.658 51.558 1.00 30.93 N
ATOM 23 N3 G A 9 19.673 5.895 52.780 1.00 30.59 N
ATOM 24 C4 G A 9 19.108 4.762 53.267 1.00 31.05 C
ATOM 25 P U A 10 12.475 4.790 53.343 1.00 33.81 P
ATOM 26 OP1 U A 10 11.123 5.367 53.515 1.00 34.80 O
ATOM 27 OP2 U A 10 12.702 3.354 53.608 1.00 34.10 O
ATOM 28 O5' U A 10 12.988 5.099 51.860 1.00 34.28 O
TER
ATOM 1 O3' U B 36 30.925 -0.595 47.145 1.00 45.18 O
ATOM 2 P A B 37 30.658 0.563 48.225 1.00 44.49 P
ATOM 3 OP1 A B 37 31.950 0.862 48.882 1.00 44.69 O
ATOM 4 OP2 A B 37 29.495 0.170 49.050 1.00 44.32 O
ATOM 5 O5' A B 37 30.240 1.823 47.332 1.00 43.32 O
ATOM 6 C5' A B 37 30.995 3.030 47.380 1.00 40.94 C
ATOM 7 C4' A B 37 30.108 4.219 47.055 1.00 39.16 C
ATOM 8 O4' A B 37 28.813 3.745 46.605 1.00 38.42 O
ATOM 9 C3' A B 37 29.804 5.135 48.232 1.00 37.91 C
ATOM 10 O3' A B 37 30.804 6.137 48.328 1.00 37.64 O
ATOM 11 C2' A B 37 28.466 5.733 47.819 1.00 37.52 C
ATOM 12 O2' A B 37 28.615 6.769 46.866 1.00 37.30 O
ATOM 13 C1' A B 37 27.783 4.534 47.174 1.00 36.93 C
ATOM 14 N9 A B 37 27.011 3.712 48.104 1.00 36.16 N
ATOM 15 C8 A B 37 27.316 2.452 48.538 1.00 35.88 C
ATOM 16 N7 A B 37 26.436 1.949 49.369 1.00 35.33 N
ATOM 17 C5 A B 37 25.485 2.948 49.491 1.00 35.17 C
ATOM 18 C6 A B 37 24.290 3.035 50.234 1.00 35.05 C
ATOM 19 N6 A B 37 23.846 2.053 51.025 1.00 35.45 N
ATOM 20 N1 A B 37 23.571 4.172 50.134 1.00 34.77 N
ATOM 21 C2 A B 37 24.023 5.151 49.341 1.00 35.20 C
ATOM 22 N3 A B 37 25.129 5.186 48.597 1.00 34.57 N
ATOM 23 C4 A B 37 25.822 4.042 48.717 1.00 35.29 C
ATOM 24 P C B 38 31.371 6.594 49.751 1.00 37.04 P
ATOM 25 OP1 C B 38 32.501 7.516 49.503 1.00 37.51 O
ATOM 26 OP2 C B 38 31.567 5.381 50.576 1.00 37.38 O
ATOM 27 O5' C B 38 30.156 7.421 50.384 1.00 36.98 O
TER
Atoms:
OP1: (13.894,1.918,58.019)
OP2: (15.722,0.705,56.680)
C3': (14.826,5.179,54.446)
C1': (17.103,5.813,54.421)
C5': (14.916,4.426,56.882)
O6: (21.291,2.123,52.202)
O4': (16.725,5.590,55.766)
C8: (17.759,3.357,54.282)
C2: (20.787,5.644,52.107)
C6: (20.743,3.212,52.423)
C5: (19.552,3.465,53.145)
C4: (19.108,4.762,53.267)
P: (15.244,1.899,57.413)
C4': (15.282,5.486,55.862)
C2': (15.812,6.006,53.630)
O2': (15.449,7.374,53.621)
N1: (21.307,4.385,51.927)
N2: (21.473,6.658,51.558)
N3: (19.673,5.895,52.780)
N7: (18.691,2.586,53.789)
N9: (17.944,4.691,54.000)
O5': (15.363,3.157,56.439)
O3': (13.483,5.625,54.263)
OP2: (15.722,0.705,56.680)
C3': (14.826,5.179,54.446)
C1': (17.103,5.813,54.421)
C5': (14.916,4.426,56.882)
O6: (21.291,2.123,52.202)
O4': (16.725,5.590,55.766)
C8: (17.759,3.357,54.282)
C2: (20.787,5.644,52.107)
C6: (20.743,3.212,52.423)
C5: (19.552,3.465,53.145)
C4: (19.108,4.762,53.267)
P: (15.244,1.899,57.413)
C4': (15.282,5.486,55.862)
C2': (15.812,6.006,53.630)
O2': (15.449,7.374,53.621)
N1: (21.307,4.385,51.927)
N2: (21.473,6.658,51.558)
N3: (19.673,5.895,52.780)
N7: (18.691,2.586,53.789)
N9: (17.944,4.691,54.000)
O5': (15.363,3.157,56.439)
O3': (13.483,5.625,54.263)
OP1: (31.950,0.862,48.882)
OP2: (29.495,0.170,49.050)
C3': (29.804,5.135,48.232)
C1': (27.783,4.534,47.174)
C5': (30.995,3.030,47.380)
O4': (28.813,3.745,46.605)
C8: (27.316,2.452,48.538)
O2': (28.615,6.769,46.866)
C6: (24.290,3.035,50.234)
C5: (25.485,2.948,49.491)
C4: (25.822,4.042,48.717)
P: (30.658,0.563,48.225)
C4': (30.108,4.219,47.055)
C2': (28.466,5.733,47.819)
C2: (24.023,5.151,49.341)
N1: (23.571,4.172,50.134)
N3: (25.129,5.186,48.597)
N6: (23.846,2.053,51.025)
N7: (26.436,1.949,49.369)
N9: (27.011,3.712,48.104)
O5': (30.240,1.823,47.332)
O3': (30.804,6.137,48.328)
OP2: (29.495,0.170,49.050)
C3': (29.804,5.135,48.232)
C1': (27.783,4.534,47.174)
C5': (30.995,3.030,47.380)
O4': (28.813,3.745,46.605)
C8: (27.316,2.452,48.538)
O2': (28.615,6.769,46.866)
C6: (24.290,3.035,50.234)
C5: (25.485,2.948,49.491)
C4: (25.822,4.042,48.717)
P: (30.658,0.563,48.225)
C4': (30.108,4.219,47.055)
C2': (28.466,5.733,47.819)
C2: (24.023,5.151,49.341)
N1: (23.571,4.172,50.134)
N3: (25.129,5.186,48.597)
N6: (23.846,2.053,51.025)
N7: (26.436,1.949,49.369)
N9: (27.011,3.712,48.104)
O5': (30.240,1.823,47.332)
O3': (30.804,6.137,48.328)
Image (generated by PyMOL):