Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1125:A1143
Extra
PDB:
ATOM 1 O3' U A1124 -109.788 113.136 27.129 1.00 76.27 O
ATOM 2 P G A1125 -109.162 114.614 26.992 1.00 70.56 P
ATOM 3 OP1 G A1125 -109.102 115.192 28.362 1.00 70.56 O
ATOM 4 OP2 G A1125 -109.952 115.329 25.953 1.00 70.56 O
ATOM 5 O5' G A1125 -107.677 114.333 26.450 1.00 70.56 O
ATOM 6 C5' G A1125 -106.597 114.090 27.351 1.00 70.56 C
ATOM 7 C4' G A1125 -105.268 114.554 26.792 1.00 70.56 C
ATOM 8 O4' G A1125 -104.773 113.605 25.818 1.00 70.56 O
ATOM 9 C3' G A1125 -105.278 115.879 26.053 1.00 70.56 C
ATOM 10 O3' G A1125 -105.238 116.987 26.930 1.00 70.56 O
ATOM 11 C2' G A1125 -104.061 115.777 25.140 1.00 70.56 C
ATOM 12 O2' G A1125 -102.873 116.123 25.833 1.00 70.56 O
ATOM 13 C1' G A1125 -104.022 114.279 24.827 1.00 70.56 C
ATOM 14 N9 G A1125 -104.593 113.950 23.505 1.00 69.97 N
ATOM 15 C8 G A1125 -105.825 113.358 23.379 1.00 69.97 C
ATOM 16 N7 G A1125 -106.148 113.106 22.147 1.00 69.97 N
ATOM 17 C5 G A1125 -105.059 113.538 21.401 1.00 69.97 C
ATOM 18 C6 G A1125 -104.882 113.503 19.995 1.00 69.97 C
ATOM 19 O6 G A1125 -105.667 113.076 19.149 1.00 69.97 O
ATOM 20 N1 G A1125 -103.663 114.023 19.598 1.00 69.97 N
ATOM 21 C2 G A1125 -102.729 114.524 20.458 1.00 69.97 C
ATOM 22 N2 G A1125 -101.638 114.980 19.831 1.00 69.97 N
ATOM 23 N3 G A1125 -102.867 114.574 21.791 1.00 69.97 N
ATOM 24 C4 G A1125 -104.063 114.060 22.211 1.00 69.97 C
ATOM 25 P C A1126 -106.150 118.271 26.638 1.00 67.89 P
ATOM 26 OP1 C A1126 -106.229 119.060 27.898 1.00 67.89 O
ATOM 27 OP2 C A1126 -107.404 117.778 26.026 1.00 67.89 O
ATOM 28 O5' C A1126 -105.294 119.056 25.556 1.00 67.89 O
TER
ATOM 1 O3' G B1142 -104.284 118.978 9.181 1.00 65.38 O
ATOM 2 P A B1143 -103.864 118.060 7.925 1.00 94.45 P
ATOM 3 OP1 A B1143 -102.396 118.224 7.732 1.00 94.45 O
ATOM 4 OP2 A B1143 -104.768 118.412 6.807 1.00 94.45 O
ATOM 5 O5' A B1143 -104.177 116.586 8.437 1.00 94.45 O
ATOM 6 C5' A B1143 -103.293 115.936 9.330 1.00 94.45 C
ATOM 7 C4' A B1143 -102.680 116.919 10.298 1.00 94.45 C
ATOM 8 O4' A B1143 -103.653 117.281 11.311 1.00 94.45 O
ATOM 9 C3' A B1143 -101.461 116.427 11.062 1.00 94.45 C
ATOM 10 O3' A B1143 -100.260 116.661 10.332 1.00 94.45 O
ATOM 11 C2' A B1143 -101.548 117.189 12.385 1.00 94.45 C
ATOM 12 O2' A B1143 -101.013 118.494 12.249 1.00 94.45 O
ATOM 13 C1' A B1143 -103.056 117.322 12.577 1.00 94.45 C
ATOM 14 N9 A B1143 -103.643 116.237 13.370 1.00 93.35 N
ATOM 15 C8 A B1143 -104.123 115.079 12.824 1.00 93.35 C
ATOM 16 N7 A B1143 -104.670 114.271 13.686 1.00 93.35 N
ATOM 17 C5 A B1143 -104.565 114.967 14.874 1.00 93.35 C
ATOM 18 C6 A B1143 -104.970 114.616 16.158 1.00 93.35 C
ATOM 19 N6 A B1143 -105.571 113.444 16.384 1.00 93.35 N
ATOM 20 N1 A B1143 -104.736 115.503 17.153 1.00 93.35 N
ATOM 21 C2 A B1143 -104.134 116.659 16.839 1.00 93.35 C
ATOM 22 N3 A B1143 -103.709 117.100 15.658 1.00 93.35 N
ATOM 23 C4 A B1143 -103.958 116.194 14.702 1.00 93.35 C
ATOM 24 P A B1144 -98.825 116.523 11.034 1.00 71.02 P
ATOM 25 OP1 A B1144 -97.907 115.909 10.035 1.00 71.02 O
ATOM 26 OP2 A B1144 -99.052 115.815 12.324 1.00 71.02 O
ATOM 27 O5' A B1144 -98.397 118.057 11.293 1.00 71.02 O
TER
ATOM 2 P G A1125 -109.162 114.614 26.992 1.00 70.56 P
ATOM 3 OP1 G A1125 -109.102 115.192 28.362 1.00 70.56 O
ATOM 4 OP2 G A1125 -109.952 115.329 25.953 1.00 70.56 O
ATOM 5 O5' G A1125 -107.677 114.333 26.450 1.00 70.56 O
ATOM 6 C5' G A1125 -106.597 114.090 27.351 1.00 70.56 C
ATOM 7 C4' G A1125 -105.268 114.554 26.792 1.00 70.56 C
ATOM 8 O4' G A1125 -104.773 113.605 25.818 1.00 70.56 O
ATOM 9 C3' G A1125 -105.278 115.879 26.053 1.00 70.56 C
ATOM 10 O3' G A1125 -105.238 116.987 26.930 1.00 70.56 O
ATOM 11 C2' G A1125 -104.061 115.777 25.140 1.00 70.56 C
ATOM 12 O2' G A1125 -102.873 116.123 25.833 1.00 70.56 O
ATOM 13 C1' G A1125 -104.022 114.279 24.827 1.00 70.56 C
ATOM 14 N9 G A1125 -104.593 113.950 23.505 1.00 69.97 N
ATOM 15 C8 G A1125 -105.825 113.358 23.379 1.00 69.97 C
ATOM 16 N7 G A1125 -106.148 113.106 22.147 1.00 69.97 N
ATOM 17 C5 G A1125 -105.059 113.538 21.401 1.00 69.97 C
ATOM 18 C6 G A1125 -104.882 113.503 19.995 1.00 69.97 C
ATOM 19 O6 G A1125 -105.667 113.076 19.149 1.00 69.97 O
ATOM 20 N1 G A1125 -103.663 114.023 19.598 1.00 69.97 N
ATOM 21 C2 G A1125 -102.729 114.524 20.458 1.00 69.97 C
ATOM 22 N2 G A1125 -101.638 114.980 19.831 1.00 69.97 N
ATOM 23 N3 G A1125 -102.867 114.574 21.791 1.00 69.97 N
ATOM 24 C4 G A1125 -104.063 114.060 22.211 1.00 69.97 C
ATOM 25 P C A1126 -106.150 118.271 26.638 1.00 67.89 P
ATOM 26 OP1 C A1126 -106.229 119.060 27.898 1.00 67.89 O
ATOM 27 OP2 C A1126 -107.404 117.778 26.026 1.00 67.89 O
ATOM 28 O5' C A1126 -105.294 119.056 25.556 1.00 67.89 O
TER
ATOM 1 O3' G B1142 -104.284 118.978 9.181 1.00 65.38 O
ATOM 2 P A B1143 -103.864 118.060 7.925 1.00 94.45 P
ATOM 3 OP1 A B1143 -102.396 118.224 7.732 1.00 94.45 O
ATOM 4 OP2 A B1143 -104.768 118.412 6.807 1.00 94.45 O
ATOM 5 O5' A B1143 -104.177 116.586 8.437 1.00 94.45 O
ATOM 6 C5' A B1143 -103.293 115.936 9.330 1.00 94.45 C
ATOM 7 C4' A B1143 -102.680 116.919 10.298 1.00 94.45 C
ATOM 8 O4' A B1143 -103.653 117.281 11.311 1.00 94.45 O
ATOM 9 C3' A B1143 -101.461 116.427 11.062 1.00 94.45 C
ATOM 10 O3' A B1143 -100.260 116.661 10.332 1.00 94.45 O
ATOM 11 C2' A B1143 -101.548 117.189 12.385 1.00 94.45 C
ATOM 12 O2' A B1143 -101.013 118.494 12.249 1.00 94.45 O
ATOM 13 C1' A B1143 -103.056 117.322 12.577 1.00 94.45 C
ATOM 14 N9 A B1143 -103.643 116.237 13.370 1.00 93.35 N
ATOM 15 C8 A B1143 -104.123 115.079 12.824 1.00 93.35 C
ATOM 16 N7 A B1143 -104.670 114.271 13.686 1.00 93.35 N
ATOM 17 C5 A B1143 -104.565 114.967 14.874 1.00 93.35 C
ATOM 18 C6 A B1143 -104.970 114.616 16.158 1.00 93.35 C
ATOM 19 N6 A B1143 -105.571 113.444 16.384 1.00 93.35 N
ATOM 20 N1 A B1143 -104.736 115.503 17.153 1.00 93.35 N
ATOM 21 C2 A B1143 -104.134 116.659 16.839 1.00 93.35 C
ATOM 22 N3 A B1143 -103.709 117.100 15.658 1.00 93.35 N
ATOM 23 C4 A B1143 -103.958 116.194 14.702 1.00 93.35 C
ATOM 24 P A B1144 -98.825 116.523 11.034 1.00 71.02 P
ATOM 25 OP1 A B1144 -97.907 115.909 10.035 1.00 71.02 O
ATOM 26 OP2 A B1144 -99.052 115.815 12.324 1.00 71.02 O
ATOM 27 O5' A B1144 -98.397 118.057 11.293 1.00 71.02 O
TER
Atoms:
OP1: (-109.102,115.192,28.362)
OP2: (-109.952,115.329,25.953)
C3': (-105.278,115.879,26.053)
C1': (-104.022,114.279,24.827)
C5': (-106.597,114.090,27.351)
O6: (-105.667,113.076,19.149)
O4': (-104.773,113.605,25.818)
C8: (-105.825,113.358,23.379)
C2: (-102.729,114.524,20.458)
C6: (-104.882,113.503,19.995)
C5: (-105.059,113.538,21.401)
C4: (-104.063,114.060,22.211)
P: (-109.162,114.614,26.992)
C4': (-105.268,114.554,26.792)
C2': (-104.061,115.777,25.140)
O2': (-102.873,116.123,25.833)
N1: (-103.663,114.023,19.598)
N2: (-101.638,114.980,19.831)
N3: (-102.867,114.574,21.791)
N7: (-106.148,113.106,22.147)
N9: (-104.593,113.950,23.505)
O5': (-107.677,114.333,26.450)
O3': (-105.238,116.987,26.930)
OP2: (-109.952,115.329,25.953)
C3': (-105.278,115.879,26.053)
C1': (-104.022,114.279,24.827)
C5': (-106.597,114.090,27.351)
O6: (-105.667,113.076,19.149)
O4': (-104.773,113.605,25.818)
C8: (-105.825,113.358,23.379)
C2: (-102.729,114.524,20.458)
C6: (-104.882,113.503,19.995)
C5: (-105.059,113.538,21.401)
C4: (-104.063,114.060,22.211)
P: (-109.162,114.614,26.992)
C4': (-105.268,114.554,26.792)
C2': (-104.061,115.777,25.140)
O2': (-102.873,116.123,25.833)
N1: (-103.663,114.023,19.598)
N2: (-101.638,114.980,19.831)
N3: (-102.867,114.574,21.791)
N7: (-106.148,113.106,22.147)
N9: (-104.593,113.950,23.505)
O5': (-107.677,114.333,26.450)
O3': (-105.238,116.987,26.930)
OP1: (-102.396,118.224,7.732)
OP2: (-104.768,118.412,6.807)
C3': (-101.461,116.427,11.062)
C1': (-103.056,117.322,12.577)
C5': (-103.293,115.936,9.330)
O4': (-103.653,117.281,11.311)
C8: (-104.123,115.079,12.824)
O2': (-101.013,118.494,12.249)
C6: (-104.970,114.616,16.158)
C5: (-104.565,114.967,14.874)
C4: (-103.958,116.194,14.702)
P: (-103.864,118.060,7.925)
C4': (-102.680,116.919,10.298)
C2': (-101.548,117.189,12.385)
C2: (-104.134,116.659,16.839)
N1: (-104.736,115.503,17.153)
N3: (-103.709,117.100,15.658)
N6: (-105.571,113.444,16.384)
N7: (-104.670,114.271,13.686)
N9: (-103.643,116.237,13.370)
O5': (-104.177,116.586,8.437)
O3': (-100.260,116.661,10.332)
OP2: (-104.768,118.412,6.807)
C3': (-101.461,116.427,11.062)
C1': (-103.056,117.322,12.577)
C5': (-103.293,115.936,9.330)
O4': (-103.653,117.281,11.311)
C8: (-104.123,115.079,12.824)
O2': (-101.013,118.494,12.249)
C6: (-104.970,114.616,16.158)
C5: (-104.565,114.967,14.874)
C4: (-103.958,116.194,14.702)
P: (-103.864,118.060,7.925)
C4': (-102.680,116.919,10.298)
C2': (-101.548,117.189,12.385)
C2: (-104.134,116.659,16.839)
N1: (-104.736,115.503,17.153)
N3: (-103.709,117.100,15.658)
N6: (-105.571,113.444,16.384)
N7: (-104.670,114.271,13.686)
N9: (-103.643,116.237,13.370)
O5': (-104.177,116.586,8.437)
O3': (-100.260,116.661,10.332)
Image (generated by PyMOL):