Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OGY:A917:A1212
Extra
PDB:
ATOM 1 O3' G A 916 125.365-105.402-222.007 1.00153.83 O
ATOM 2 P G A 917 123.889-105.720-221.427 1.00160.81 P
ATOM 3 OP1 G A 917 124.049-106.722-220.337 1.00158.78 O
ATOM 4 OP2 G A 917 123.018-106.061-222.581 1.00169.73 O
ATOM 5 O5' G A 917 123.448-104.321-220.815 1.00156.62 O
ATOM 6 C5' G A 917 124.341-103.572-220.011 1.00154.86 C
ATOM 7 C4' G A 917 123.843-102.169-219.786 1.00155.32 C
ATOM 8 O4' G A 917 124.173-101.333-220.923 1.00154.92 O
ATOM 9 C3' G A 917 122.340-102.002-219.635 1.00154.28 C
ATOM 10 O3' G A 917 121.871-102.358-218.344 1.00153.33 O
ATOM 11 C2' G A 917 122.142-100.527-219.972 1.00157.44 C
ATOM 12 O2' G A 917 122.457 -99.709-218.855 1.00153.78 O
ATOM 13 C1' G A 917 123.211-100.307-221.050 1.00159.59 C
ATOM 14 N9 G A 917 122.650-100.346-222.414 1.00187.46 N
ATOM 15 C8 G A 917 123.297-100.770-223.550 1.00187.18 C
ATOM 16 N7 G A 917 122.558-100.684-224.623 1.00188.05 N
ATOM 17 C5 G A 917 121.355-100.165-224.168 1.00187.96 C
ATOM 18 C6 G A 917 120.170 -99.851-224.876 1.00189.24 C
ATOM 19 O6 G A 917 119.947 -99.978-226.084 1.00191.05 O
ATOM 20 N1 G A 917 119.183 -99.345-224.037 1.00188.35 N
ATOM 21 C2 G A 917 119.320 -99.160-222.686 1.00187.56 C
ATOM 22 N2 G A 917 118.256 -98.661-222.045 1.00185.47 N
ATOM 23 N3 G A 917 120.418 -99.449-222.012 1.00187.64 N
ATOM 24 C4 G A 917 121.392 -99.944-222.808 1.00188.32 C
ATOM 25 P A A 918 120.707-103.457-218.173 1.00168.31 P
ATOM 26 OP1 A A 918 120.560-103.719-216.720 1.00170.59 O
ATOM 27 OP2 A A 918 121.041-104.589-219.070 1.00174.21 O
ATOM 28 O5' A A 918 119.421-102.695-218.716 1.00169.73 O
TER
ATOM 1 O3' U B1211 109.175-101.476-232.447 1.00160.74 O
ATOM 2 P A B1212 109.822-100.136-233.066 1.00180.45 P
ATOM 3 OP1 A B1212 108.996 -99.748-234.236 1.00162.77 O
ATOM 4 OP2 A B1212 111.268-100.402-233.272 1.00167.41 O
ATOM 5 O5' A B1212 109.627 -99.079-231.891 1.00185.36 O
ATOM 6 C5' A B1212 110.665 -98.176-231.535 1.00185.37 C
ATOM 7 C4' A B1212 110.733 -97.982-230.042 1.00183.96 C
ATOM 8 O4' A B1212 111.360 -99.139-229.429 1.00182.28 O
ATOM 9 C3' A B1212 111.568 -96.809-229.556 1.00185.53 C
ATOM 10 O3' A B1212 110.875 -95.571-229.618 1.00188.76 O
ATOM 11 C2' A B1212 111.938 -97.235-228.142 1.00186.80 C
ATOM 12 O2' A B1212 110.843 -97.048-227.257 1.00186.66 O
ATOM 13 C1' A B1212 112.150 -98.736-228.333 1.00182.42 C
ATOM 14 N9 A B1212 113.555 -99.062-228.632 1.00179.53 N
ATOM 15 C8 A B1212 114.106 -99.285-229.870 1.00177.70 C
ATOM 16 N7 A B1212 115.386 -99.559-229.832 1.00178.76 N
ATOM 17 C5 A B1212 115.697 -99.516-228.478 1.00180.72 C
ATOM 18 C6 A B1212 116.899 -99.719-227.776 1.00177.64 C
ATOM 19 N6 A B1212 118.050-100.019-228.374 1.00176.63 N
ATOM 20 N1 A B1212 116.877 -99.604-226.428 1.00176.68 N
ATOM 21 C2 A B1212 115.716 -99.302-225.834 1.00178.68 C
ATOM 22 N3 A B1212 114.520 -99.091-226.383 1.00182.15 N
ATOM 23 C4 A B1212 114.577 -99.214-227.724 1.00182.41 C
ATOM 24 P C B1213 111.610 -94.253-230.185 1.00196.06 P
ATOM 25 OP1 C B1213 110.578 -93.437-230.866 1.00194.60 O
ATOM 26 OP2 C B1213 112.786 -94.710-230.968 1.00194.31 O
ATOM 27 O5' C B1213 112.097 -93.515-228.856 1.00199.07 O
TER
ATOM 2 P G A 917 123.889-105.720-221.427 1.00160.81 P
ATOM 3 OP1 G A 917 124.049-106.722-220.337 1.00158.78 O
ATOM 4 OP2 G A 917 123.018-106.061-222.581 1.00169.73 O
ATOM 5 O5' G A 917 123.448-104.321-220.815 1.00156.62 O
ATOM 6 C5' G A 917 124.341-103.572-220.011 1.00154.86 C
ATOM 7 C4' G A 917 123.843-102.169-219.786 1.00155.32 C
ATOM 8 O4' G A 917 124.173-101.333-220.923 1.00154.92 O
ATOM 9 C3' G A 917 122.340-102.002-219.635 1.00154.28 C
ATOM 10 O3' G A 917 121.871-102.358-218.344 1.00153.33 O
ATOM 11 C2' G A 917 122.142-100.527-219.972 1.00157.44 C
ATOM 12 O2' G A 917 122.457 -99.709-218.855 1.00153.78 O
ATOM 13 C1' G A 917 123.211-100.307-221.050 1.00159.59 C
ATOM 14 N9 G A 917 122.650-100.346-222.414 1.00187.46 N
ATOM 15 C8 G A 917 123.297-100.770-223.550 1.00187.18 C
ATOM 16 N7 G A 917 122.558-100.684-224.623 1.00188.05 N
ATOM 17 C5 G A 917 121.355-100.165-224.168 1.00187.96 C
ATOM 18 C6 G A 917 120.170 -99.851-224.876 1.00189.24 C
ATOM 19 O6 G A 917 119.947 -99.978-226.084 1.00191.05 O
ATOM 20 N1 G A 917 119.183 -99.345-224.037 1.00188.35 N
ATOM 21 C2 G A 917 119.320 -99.160-222.686 1.00187.56 C
ATOM 22 N2 G A 917 118.256 -98.661-222.045 1.00185.47 N
ATOM 23 N3 G A 917 120.418 -99.449-222.012 1.00187.64 N
ATOM 24 C4 G A 917 121.392 -99.944-222.808 1.00188.32 C
ATOM 25 P A A 918 120.707-103.457-218.173 1.00168.31 P
ATOM 26 OP1 A A 918 120.560-103.719-216.720 1.00170.59 O
ATOM 27 OP2 A A 918 121.041-104.589-219.070 1.00174.21 O
ATOM 28 O5' A A 918 119.421-102.695-218.716 1.00169.73 O
TER
ATOM 1 O3' U B1211 109.175-101.476-232.447 1.00160.74 O
ATOM 2 P A B1212 109.822-100.136-233.066 1.00180.45 P
ATOM 3 OP1 A B1212 108.996 -99.748-234.236 1.00162.77 O
ATOM 4 OP2 A B1212 111.268-100.402-233.272 1.00167.41 O
ATOM 5 O5' A B1212 109.627 -99.079-231.891 1.00185.36 O
ATOM 6 C5' A B1212 110.665 -98.176-231.535 1.00185.37 C
ATOM 7 C4' A B1212 110.733 -97.982-230.042 1.00183.96 C
ATOM 8 O4' A B1212 111.360 -99.139-229.429 1.00182.28 O
ATOM 9 C3' A B1212 111.568 -96.809-229.556 1.00185.53 C
ATOM 10 O3' A B1212 110.875 -95.571-229.618 1.00188.76 O
ATOM 11 C2' A B1212 111.938 -97.235-228.142 1.00186.80 C
ATOM 12 O2' A B1212 110.843 -97.048-227.257 1.00186.66 O
ATOM 13 C1' A B1212 112.150 -98.736-228.333 1.00182.42 C
ATOM 14 N9 A B1212 113.555 -99.062-228.632 1.00179.53 N
ATOM 15 C8 A B1212 114.106 -99.285-229.870 1.00177.70 C
ATOM 16 N7 A B1212 115.386 -99.559-229.832 1.00178.76 N
ATOM 17 C5 A B1212 115.697 -99.516-228.478 1.00180.72 C
ATOM 18 C6 A B1212 116.899 -99.719-227.776 1.00177.64 C
ATOM 19 N6 A B1212 118.050-100.019-228.374 1.00176.63 N
ATOM 20 N1 A B1212 116.877 -99.604-226.428 1.00176.68 N
ATOM 21 C2 A B1212 115.716 -99.302-225.834 1.00178.68 C
ATOM 22 N3 A B1212 114.520 -99.091-226.383 1.00182.15 N
ATOM 23 C4 A B1212 114.577 -99.214-227.724 1.00182.41 C
ATOM 24 P C B1213 111.610 -94.253-230.185 1.00196.06 P
ATOM 25 OP1 C B1213 110.578 -93.437-230.866 1.00194.60 O
ATOM 26 OP2 C B1213 112.786 -94.710-230.968 1.00194.31 O
ATOM 27 O5' C B1213 112.097 -93.515-228.856 1.00199.07 O
TER
Atoms:
OP1: (124.049,-106.722,-220.337)
OP2: (123.018,-106.061,-222.581)
C3': (122.340,-102.002,-219.635)
C1': (123.211,-100.307,-221.050)
C5': (124.341,-103.572,-220.011)
O6: (119.947,-99.978,-226.084)
O4': (124.173,-101.333,-220.923)
C8: (123.297,-100.770,-223.550)
C2: (119.320,-99.160,-222.686)
C6: (120.170,-99.851,-224.876)
C5: (121.355,-100.165,-224.168)
C4: (121.392,-99.944,-222.808)
P: (123.889,-105.720,-221.427)
C4': (123.843,-102.169,-219.786)
C2': (122.142,-100.527,-219.972)
O2': (122.457,-99.709,-218.855)
N1: (119.183,-99.345,-224.037)
N2: (118.256,-98.661,-222.045)
N3: (120.418,-99.449,-222.012)
N7: (122.558,-100.684,-224.623)
N9: (122.650,-100.346,-222.414)
O5': (123.448,-104.321,-220.815)
O3': (121.871,-102.358,-218.344)
OP2: (123.018,-106.061,-222.581)
C3': (122.340,-102.002,-219.635)
C1': (123.211,-100.307,-221.050)
C5': (124.341,-103.572,-220.011)
O6: (119.947,-99.978,-226.084)
O4': (124.173,-101.333,-220.923)
C8: (123.297,-100.770,-223.550)
C2: (119.320,-99.160,-222.686)
C6: (120.170,-99.851,-224.876)
C5: (121.355,-100.165,-224.168)
C4: (121.392,-99.944,-222.808)
P: (123.889,-105.720,-221.427)
C4': (123.843,-102.169,-219.786)
C2': (122.142,-100.527,-219.972)
O2': (122.457,-99.709,-218.855)
N1: (119.183,-99.345,-224.037)
N2: (118.256,-98.661,-222.045)
N3: (120.418,-99.449,-222.012)
N7: (122.558,-100.684,-224.623)
N9: (122.650,-100.346,-222.414)
O5': (123.448,-104.321,-220.815)
O3': (121.871,-102.358,-218.344)
OP1: (108.996,-99.748,-234.236)
OP2: (111.268,-100.402,-233.272)
C3': (111.568,-96.809,-229.556)
C1': (112.150,-98.736,-228.333)
C5': (110.665,-98.176,-231.535)
O4': (111.360,-99.139,-229.429)
C8: (114.106,-99.285,-229.870)
O2': (110.843,-97.048,-227.257)
C6: (116.899,-99.719,-227.776)
C5: (115.697,-99.516,-228.478)
C4: (114.577,-99.214,-227.724)
P: (109.822,-100.136,-233.066)
C4': (110.733,-97.982,-230.042)
C2': (111.938,-97.235,-228.142)
C2: (115.716,-99.302,-225.834)
N1: (116.877,-99.604,-226.428)
N3: (114.520,-99.091,-226.383)
N6: (118.050,-100.019,-228.374)
N7: (115.386,-99.559,-229.832)
N9: (113.555,-99.062,-228.632)
O5': (109.627,-99.079,-231.891)
O3': (110.875,-95.571,-229.618)
OP2: (111.268,-100.402,-233.272)
C3': (111.568,-96.809,-229.556)
C1': (112.150,-98.736,-228.333)
C5': (110.665,-98.176,-231.535)
O4': (111.360,-99.139,-229.429)
C8: (114.106,-99.285,-229.870)
O2': (110.843,-97.048,-227.257)
C6: (116.899,-99.719,-227.776)
C5: (115.697,-99.516,-228.478)
C4: (114.577,-99.214,-227.724)
P: (109.822,-100.136,-233.066)
C4': (110.733,-97.982,-230.042)
C2': (111.938,-97.235,-228.142)
C2: (115.716,-99.302,-225.834)
N1: (116.877,-99.604,-226.428)
N3: (114.520,-99.091,-226.383)
N6: (118.050,-100.019,-228.374)
N7: (115.386,-99.559,-229.832)
N9: (113.555,-99.062,-228.632)
O5': (109.627,-99.079,-231.891)
O3': (110.875,-95.571,-229.618)
Image (generated by PyMOL):