Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A126:A29
Extra
PDB:
ATOM 1 O3' U A 125 38.332 62.088 27.287 1.00 30.85 O
ATOM 2 P G A 126 37.706 60.698 26.801 1.00 35.64 P
ATOM 3 OP1 G A 126 36.827 60.225 27.906 1.00 40.15 O
ATOM 4 OP2 G A 126 38.819 59.860 26.307 1.00 31.58 O
ATOM 5 O5' G A 126 36.819 61.110 25.554 1.00 35.16 O
ATOM 6 C5' G A 126 35.531 61.664 25.714 1.00 31.66 C
ATOM 7 C4' G A 126 35.073 62.317 24.437 1.00 32.07 C
ATOM 8 O4' G A 126 36.147 63.116 23.881 1.00 29.40 O
ATOM 9 C3' G A 126 34.699 61.385 23.293 1.00 32.81 C
ATOM 10 O3' G A 126 33.420 60.790 23.443 1.00 32.84 O
ATOM 11 C2' G A 126 34.805 62.322 22.098 1.00 29.22 C
ATOM 12 O2' G A 126 33.717 63.234 22.074 1.00 30.44 O
ATOM 13 C1' G A 126 36.066 63.097 22.471 1.00 28.66 C
ATOM 14 N9 G A 126 37.256 62.410 21.945 1.00 24.15 N
ATOM 15 C8 G A 126 38.156 61.669 22.665 1.00 28.76 C
ATOM 16 N7 G A 126 39.108 61.166 21.919 1.00 28.10 N
ATOM 17 C5 G A 126 38.804 61.593 20.634 1.00 27.41 C
ATOM 18 C6 G A 126 39.480 61.355 19.408 1.00 25.31 C
ATOM 19 O6 G A 126 40.511 60.703 19.216 1.00 24.29 O
ATOM 20 N1 G A 126 38.830 61.962 18.343 1.00 25.89 N
ATOM 21 C2 G A 126 37.688 62.706 18.438 1.00 25.11 C
ATOM 22 N2 G A 126 37.222 63.213 17.284 1.00 28.95 N
ATOM 23 N3 G A 126 37.055 62.945 19.573 1.00 27.41 N
ATOM 24 C4 G A 126 37.663 62.357 20.629 1.00 27.23 C
ATOM 25 P C A 127 33.080 59.363 22.790 1.00 35.18 P
ATOM 26 OP1 C A 127 31.658 59.141 23.160 1.00 39.06 O
ATOM 27 OP2 C A 127 34.085 58.342 23.159 1.00 29.15 O
ATOM 28 O5' C A 127 33.220 59.655 21.238 1.00 30.93 O
TER
ATOM 1 O3' G B 28 43.818 56.240 9.407 1.00 38.39 O
ATOM 2 P A B 29 44.377 57.738 9.350 1.00 38.09 P
ATOM 3 OP1 A B 29 45.149 57.793 8.076 1.00 45.07 O
ATOM 4 OP2 A B 29 45.097 58.034 10.622 1.00 36.55 O
ATOM 5 O5' A B 29 43.052 58.598 9.270 1.00 32.97 O
ATOM 6 C5' A B 29 42.033 58.449 8.293 1.00 36.52 C
ATOM 7 C4' A B 29 40.777 59.174 8.727 1.00 34.22 C
ATOM 8 O4' A B 29 40.317 58.612 9.983 1.00 33.97 O
ATOM 9 C3' A B 29 40.900 60.665 9.034 1.00 37.16 C
ATOM 10 O3' A B 29 40.805 61.495 7.893 1.00 38.73 O
ATOM 11 C2' A B 29 39.764 60.924 10.015 1.00 35.12 C
ATOM 12 O2' A B 29 38.532 61.069 9.325 1.00 37.00 O
ATOM 13 C1' A B 29 39.727 59.614 10.791 1.00 33.97 C
ATOM 14 N9 A B 29 40.449 59.665 12.080 1.00 33.42 N
ATOM 15 C8 A B 29 41.677 59.115 12.396 1.00 30.82 C
ATOM 16 N7 A B 29 42.041 59.298 13.647 1.00 28.64 N
ATOM 17 C5 A B 29 40.969 60.001 14.195 1.00 28.56 C
ATOM 18 C6 A B 29 40.725 60.497 15.485 1.00 25.88 C
ATOM 19 N6 A B 29 41.581 60.357 16.497 1.00 27.94 N
ATOM 20 N1 A B 29 39.567 61.157 15.695 1.00 27.68 N
ATOM 21 C2 A B 29 38.707 61.300 14.676 1.00 27.84 C
ATOM 22 N3 A B 29 38.829 60.872 13.420 1.00 26.95 N
ATOM 23 C4 A B 29 39.984 60.227 13.245 1.00 27.49 C
ATOM 24 P G B 30 41.557 62.919 7.883 1.00 37.63 P
ATOM 25 OP1 G B 30 41.290 63.496 6.542 1.00 38.43 O
ATOM 26 OP2 G B 30 42.945 62.662 8.318 1.00 33.36 O
ATOM 27 O5' G B 30 40.808 63.772 8.986 1.00 33.75 O
TER
ATOM 2 P G A 126 37.706 60.698 26.801 1.00 35.64 P
ATOM 3 OP1 G A 126 36.827 60.225 27.906 1.00 40.15 O
ATOM 4 OP2 G A 126 38.819 59.860 26.307 1.00 31.58 O
ATOM 5 O5' G A 126 36.819 61.110 25.554 1.00 35.16 O
ATOM 6 C5' G A 126 35.531 61.664 25.714 1.00 31.66 C
ATOM 7 C4' G A 126 35.073 62.317 24.437 1.00 32.07 C
ATOM 8 O4' G A 126 36.147 63.116 23.881 1.00 29.40 O
ATOM 9 C3' G A 126 34.699 61.385 23.293 1.00 32.81 C
ATOM 10 O3' G A 126 33.420 60.790 23.443 1.00 32.84 O
ATOM 11 C2' G A 126 34.805 62.322 22.098 1.00 29.22 C
ATOM 12 O2' G A 126 33.717 63.234 22.074 1.00 30.44 O
ATOM 13 C1' G A 126 36.066 63.097 22.471 1.00 28.66 C
ATOM 14 N9 G A 126 37.256 62.410 21.945 1.00 24.15 N
ATOM 15 C8 G A 126 38.156 61.669 22.665 1.00 28.76 C
ATOM 16 N7 G A 126 39.108 61.166 21.919 1.00 28.10 N
ATOM 17 C5 G A 126 38.804 61.593 20.634 1.00 27.41 C
ATOM 18 C6 G A 126 39.480 61.355 19.408 1.00 25.31 C
ATOM 19 O6 G A 126 40.511 60.703 19.216 1.00 24.29 O
ATOM 20 N1 G A 126 38.830 61.962 18.343 1.00 25.89 N
ATOM 21 C2 G A 126 37.688 62.706 18.438 1.00 25.11 C
ATOM 22 N2 G A 126 37.222 63.213 17.284 1.00 28.95 N
ATOM 23 N3 G A 126 37.055 62.945 19.573 1.00 27.41 N
ATOM 24 C4 G A 126 37.663 62.357 20.629 1.00 27.23 C
ATOM 25 P C A 127 33.080 59.363 22.790 1.00 35.18 P
ATOM 26 OP1 C A 127 31.658 59.141 23.160 1.00 39.06 O
ATOM 27 OP2 C A 127 34.085 58.342 23.159 1.00 29.15 O
ATOM 28 O5' C A 127 33.220 59.655 21.238 1.00 30.93 O
TER
ATOM 1 O3' G B 28 43.818 56.240 9.407 1.00 38.39 O
ATOM 2 P A B 29 44.377 57.738 9.350 1.00 38.09 P
ATOM 3 OP1 A B 29 45.149 57.793 8.076 1.00 45.07 O
ATOM 4 OP2 A B 29 45.097 58.034 10.622 1.00 36.55 O
ATOM 5 O5' A B 29 43.052 58.598 9.270 1.00 32.97 O
ATOM 6 C5' A B 29 42.033 58.449 8.293 1.00 36.52 C
ATOM 7 C4' A B 29 40.777 59.174 8.727 1.00 34.22 C
ATOM 8 O4' A B 29 40.317 58.612 9.983 1.00 33.97 O
ATOM 9 C3' A B 29 40.900 60.665 9.034 1.00 37.16 C
ATOM 10 O3' A B 29 40.805 61.495 7.893 1.00 38.73 O
ATOM 11 C2' A B 29 39.764 60.924 10.015 1.00 35.12 C
ATOM 12 O2' A B 29 38.532 61.069 9.325 1.00 37.00 O
ATOM 13 C1' A B 29 39.727 59.614 10.791 1.00 33.97 C
ATOM 14 N9 A B 29 40.449 59.665 12.080 1.00 33.42 N
ATOM 15 C8 A B 29 41.677 59.115 12.396 1.00 30.82 C
ATOM 16 N7 A B 29 42.041 59.298 13.647 1.00 28.64 N
ATOM 17 C5 A B 29 40.969 60.001 14.195 1.00 28.56 C
ATOM 18 C6 A B 29 40.725 60.497 15.485 1.00 25.88 C
ATOM 19 N6 A B 29 41.581 60.357 16.497 1.00 27.94 N
ATOM 20 N1 A B 29 39.567 61.157 15.695 1.00 27.68 N
ATOM 21 C2 A B 29 38.707 61.300 14.676 1.00 27.84 C
ATOM 22 N3 A B 29 38.829 60.872 13.420 1.00 26.95 N
ATOM 23 C4 A B 29 39.984 60.227 13.245 1.00 27.49 C
ATOM 24 P G B 30 41.557 62.919 7.883 1.00 37.63 P
ATOM 25 OP1 G B 30 41.290 63.496 6.542 1.00 38.43 O
ATOM 26 OP2 G B 30 42.945 62.662 8.318 1.00 33.36 O
ATOM 27 O5' G B 30 40.808 63.772 8.986 1.00 33.75 O
TER
Atoms:
OP1: (36.827,60.225,27.906)
OP2: (38.819,59.860,26.307)
C3': (34.699,61.385,23.293)
C1': (36.066,63.097,22.471)
C5': (35.531,61.664,25.714)
O6: (40.511,60.703,19.216)
O4': (36.147,63.116,23.881)
C8: (38.156,61.669,22.665)
C2: (37.688,62.706,18.438)
C6: (39.480,61.355,19.408)
C5: (38.804,61.593,20.634)
C4: (37.663,62.357,20.629)
P: (37.706,60.698,26.801)
C4': (35.073,62.317,24.437)
C2': (34.805,62.322,22.098)
O2': (33.717,63.234,22.074)
N1: (38.830,61.962,18.343)
N2: (37.222,63.213,17.284)
N3: (37.055,62.945,19.573)
N7: (39.108,61.166,21.919)
N9: (37.256,62.410,21.945)
O5': (36.819,61.110,25.554)
O3': (33.420,60.790,23.443)
OP2: (38.819,59.860,26.307)
C3': (34.699,61.385,23.293)
C1': (36.066,63.097,22.471)
C5': (35.531,61.664,25.714)
O6: (40.511,60.703,19.216)
O4': (36.147,63.116,23.881)
C8: (38.156,61.669,22.665)
C2: (37.688,62.706,18.438)
C6: (39.480,61.355,19.408)
C5: (38.804,61.593,20.634)
C4: (37.663,62.357,20.629)
P: (37.706,60.698,26.801)
C4': (35.073,62.317,24.437)
C2': (34.805,62.322,22.098)
O2': (33.717,63.234,22.074)
N1: (38.830,61.962,18.343)
N2: (37.222,63.213,17.284)
N3: (37.055,62.945,19.573)
N7: (39.108,61.166,21.919)
N9: (37.256,62.410,21.945)
O5': (36.819,61.110,25.554)
O3': (33.420,60.790,23.443)
OP1: (45.149,57.793,8.076)
OP2: (45.097,58.034,10.622)
C3': (40.900,60.665,9.034)
C1': (39.727,59.614,10.791)
C5': (42.033,58.449,8.293)
O4': (40.317,58.612,9.983)
C8: (41.677,59.115,12.396)
O2': (38.532,61.069,9.325)
C6: (40.725,60.497,15.485)
C5: (40.969,60.001,14.195)
C4: (39.984,60.227,13.245)
P: (44.377,57.738,9.350)
C4': (40.777,59.174,8.727)
C2': (39.764,60.924,10.015)
C2: (38.707,61.300,14.676)
N1: (39.567,61.157,15.695)
N3: (38.829,60.872,13.420)
N6: (41.581,60.357,16.497)
N7: (42.041,59.298,13.647)
N9: (40.449,59.665,12.080)
O5': (43.052,58.598,9.270)
O3': (40.805,61.495,7.893)
OP2: (45.097,58.034,10.622)
C3': (40.900,60.665,9.034)
C1': (39.727,59.614,10.791)
C5': (42.033,58.449,8.293)
O4': (40.317,58.612,9.983)
C8: (41.677,59.115,12.396)
O2': (38.532,61.069,9.325)
C6: (40.725,60.497,15.485)
C5: (40.969,60.001,14.195)
C4: (39.984,60.227,13.245)
P: (44.377,57.738,9.350)
C4': (40.777,59.174,8.727)
C2': (39.764,60.924,10.015)
C2: (38.707,61.300,14.676)
N1: (39.567,61.157,15.695)
N3: (38.829,60.872,13.420)
N6: (41.581,60.357,16.497)
N7: (42.041,59.298,13.647)
N9: (40.449,59.665,12.080)
O5': (43.052,58.598,9.270)
O3': (40.805,61.495,7.893)
Image (generated by PyMOL):