Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VBX:B62:B43
Extra
PDB:
ATOM 1 O3' G A 61 34.387 72.643 66.909 1.00 59.18 O
ATOM 2 P G A 62 35.017 74.112 67.087 1.00 58.07 P
ATOM 3 OP1 G A 62 34.635 74.908 65.894 1.00 58.82 O
ATOM 4 OP2 G A 62 36.443 73.954 67.428 1.00 56.98 O
ATOM 5 O5' G A 62 34.255 74.714 68.350 1.00 57.89 O
ATOM 6 C5' G A 62 32.890 75.124 68.251 1.00 58.49 C
ATOM 7 C4' G A 62 32.323 75.370 69.628 1.00 58.67 C
ATOM 8 O4' G A 62 32.556 74.195 70.428 1.00 59.27 O
ATOM 9 C3' G A 62 32.961 76.512 70.402 1.00 59.10 C
ATOM 10 O3' G A 62 32.288 77.729 70.146 1.00 59.04 O
ATOM 11 C2' G A 62 32.883 76.088 71.855 1.00 60.88 C
ATOM 12 O2' G A 62 31.696 76.446 72.529 1.00 66.87 O
ATOM 13 C1' G A 62 32.926 74.572 71.732 1.00 58.76 C
ATOM 14 N9 G A 62 34.237 73.998 71.985 1.00 55.58 N
ATOM 15 C8 G A 62 35.307 73.961 71.142 1.00 53.47 C
ATOM 16 N7 G A 62 36.309 73.298 71.640 1.00 53.44 N
ATOM 17 C5 G A 62 35.866 72.897 72.880 1.00 54.36 C
ATOM 18 C6 G A 62 36.504 72.140 73.876 1.00 55.63 C
ATOM 19 O6 G A 62 37.641 71.655 73.847 1.00 54.16 O
ATOM 20 N1 G A 62 35.689 71.962 74.991 1.00 57.23 N
ATOM 21 C2 G A 62 34.411 72.466 75.121 1.00 55.27 C
ATOM 22 N2 G A 62 33.773 72.201 76.259 1.00 55.56 N
ATOM 23 N3 G A 62 33.810 73.173 74.196 1.00 53.78 N
ATOM 24 C4 G A 62 34.586 73.345 73.119 1.00 54.24 C
ATOM 25 P U A 63 30.682 77.854 70.331 1.00 58.45 P
ATOM 26 OP1 U A 63 30.143 77.559 71.678 1.00 58.23 O
ATOM 27 OP2 U A 63 30.044 77.228 69.151 1.00 61.33 O
ATOM 28 O5' U A 63 30.528 79.421 70.175 1.00 61.51 O
TER
ATOM 1 O3' A B 42 41.017 66.246 83.304 1.00 72.37 O
ATOM 2 P A B 43 39.670 65.519 82.843 1.00 71.64 P
ATOM 3 OP1 A B 43 39.308 64.427 83.778 1.00 72.61 O
ATOM 4 OP2 A B 43 39.882 65.219 81.405 1.00 71.64 O
ATOM 5 O5' A B 43 38.558 66.646 82.981 1.00 70.19 O
ATOM 6 C5' A B 43 38.212 67.184 84.249 1.00 68.43 C
ATOM 7 C4' A B 43 37.152 68.232 84.073 1.00 68.29 C
ATOM 8 O4' A B 43 37.722 69.372 83.380 1.00 68.69 O
ATOM 9 C3' A B 43 35.974 67.799 83.210 1.00 67.76 C
ATOM 10 O3' A B 43 34.993 67.099 83.969 1.00 67.61 O
ATOM 11 C2' A B 43 35.463 69.123 82.652 1.00 67.55 C
ATOM 12 O2' A B 43 34.602 69.796 83.546 1.00 67.74 O
ATOM 13 C1' A B 43 36.759 69.921 82.496 1.00 67.77 C
ATOM 14 N9 A B 43 37.301 69.827 81.138 1.00 67.76 N
ATOM 15 C8 A B 43 38.323 69.023 80.714 1.00 67.32 C
ATOM 16 N7 A B 43 38.582 69.134 79.435 1.00 67.09 N
ATOM 17 C5 A B 43 37.674 70.074 78.995 1.00 66.88 C
ATOM 18 C6 A B 43 37.433 70.627 77.736 1.00 65.67 C
ATOM 19 N6 A B 43 38.127 70.288 76.654 1.00 66.66 N
ATOM 20 N1 A B 43 36.455 71.541 77.621 1.00 65.03 N
ATOM 21 C2 A B 43 35.762 71.875 78.715 1.00 66.41 C
ATOM 22 N3 A B 43 35.892 71.427 79.960 1.00 66.94 N
ATOM 23 C4 A B 43 36.870 70.522 80.032 1.00 67.38 C
ATOM 24 P C B 44 34.091 65.973 83.261 1.00 68.06 P
ATOM 25 OP1 C B 44 33.076 65.476 84.228 1.00 68.65 O
ATOM 26 OP2 C B 44 35.016 65.010 82.605 1.00 68.73 O
ATOM 27 O5' C B 44 33.279 66.764 82.144 1.00 67.40 O
TER
ATOM 2 P G A 62 35.017 74.112 67.087 1.00 58.07 P
ATOM 3 OP1 G A 62 34.635 74.908 65.894 1.00 58.82 O
ATOM 4 OP2 G A 62 36.443 73.954 67.428 1.00 56.98 O
ATOM 5 O5' G A 62 34.255 74.714 68.350 1.00 57.89 O
ATOM 6 C5' G A 62 32.890 75.124 68.251 1.00 58.49 C
ATOM 7 C4' G A 62 32.323 75.370 69.628 1.00 58.67 C
ATOM 8 O4' G A 62 32.556 74.195 70.428 1.00 59.27 O
ATOM 9 C3' G A 62 32.961 76.512 70.402 1.00 59.10 C
ATOM 10 O3' G A 62 32.288 77.729 70.146 1.00 59.04 O
ATOM 11 C2' G A 62 32.883 76.088 71.855 1.00 60.88 C
ATOM 12 O2' G A 62 31.696 76.446 72.529 1.00 66.87 O
ATOM 13 C1' G A 62 32.926 74.572 71.732 1.00 58.76 C
ATOM 14 N9 G A 62 34.237 73.998 71.985 1.00 55.58 N
ATOM 15 C8 G A 62 35.307 73.961 71.142 1.00 53.47 C
ATOM 16 N7 G A 62 36.309 73.298 71.640 1.00 53.44 N
ATOM 17 C5 G A 62 35.866 72.897 72.880 1.00 54.36 C
ATOM 18 C6 G A 62 36.504 72.140 73.876 1.00 55.63 C
ATOM 19 O6 G A 62 37.641 71.655 73.847 1.00 54.16 O
ATOM 20 N1 G A 62 35.689 71.962 74.991 1.00 57.23 N
ATOM 21 C2 G A 62 34.411 72.466 75.121 1.00 55.27 C
ATOM 22 N2 G A 62 33.773 72.201 76.259 1.00 55.56 N
ATOM 23 N3 G A 62 33.810 73.173 74.196 1.00 53.78 N
ATOM 24 C4 G A 62 34.586 73.345 73.119 1.00 54.24 C
ATOM 25 P U A 63 30.682 77.854 70.331 1.00 58.45 P
ATOM 26 OP1 U A 63 30.143 77.559 71.678 1.00 58.23 O
ATOM 27 OP2 U A 63 30.044 77.228 69.151 1.00 61.33 O
ATOM 28 O5' U A 63 30.528 79.421 70.175 1.00 61.51 O
TER
ATOM 1 O3' A B 42 41.017 66.246 83.304 1.00 72.37 O
ATOM 2 P A B 43 39.670 65.519 82.843 1.00 71.64 P
ATOM 3 OP1 A B 43 39.308 64.427 83.778 1.00 72.61 O
ATOM 4 OP2 A B 43 39.882 65.219 81.405 1.00 71.64 O
ATOM 5 O5' A B 43 38.558 66.646 82.981 1.00 70.19 O
ATOM 6 C5' A B 43 38.212 67.184 84.249 1.00 68.43 C
ATOM 7 C4' A B 43 37.152 68.232 84.073 1.00 68.29 C
ATOM 8 O4' A B 43 37.722 69.372 83.380 1.00 68.69 O
ATOM 9 C3' A B 43 35.974 67.799 83.210 1.00 67.76 C
ATOM 10 O3' A B 43 34.993 67.099 83.969 1.00 67.61 O
ATOM 11 C2' A B 43 35.463 69.123 82.652 1.00 67.55 C
ATOM 12 O2' A B 43 34.602 69.796 83.546 1.00 67.74 O
ATOM 13 C1' A B 43 36.759 69.921 82.496 1.00 67.77 C
ATOM 14 N9 A B 43 37.301 69.827 81.138 1.00 67.76 N
ATOM 15 C8 A B 43 38.323 69.023 80.714 1.00 67.32 C
ATOM 16 N7 A B 43 38.582 69.134 79.435 1.00 67.09 N
ATOM 17 C5 A B 43 37.674 70.074 78.995 1.00 66.88 C
ATOM 18 C6 A B 43 37.433 70.627 77.736 1.00 65.67 C
ATOM 19 N6 A B 43 38.127 70.288 76.654 1.00 66.66 N
ATOM 20 N1 A B 43 36.455 71.541 77.621 1.00 65.03 N
ATOM 21 C2 A B 43 35.762 71.875 78.715 1.00 66.41 C
ATOM 22 N3 A B 43 35.892 71.427 79.960 1.00 66.94 N
ATOM 23 C4 A B 43 36.870 70.522 80.032 1.00 67.38 C
ATOM 24 P C B 44 34.091 65.973 83.261 1.00 68.06 P
ATOM 25 OP1 C B 44 33.076 65.476 84.228 1.00 68.65 O
ATOM 26 OP2 C B 44 35.016 65.010 82.605 1.00 68.73 O
ATOM 27 O5' C B 44 33.279 66.764 82.144 1.00 67.40 O
TER
Atoms:
OP1: (34.635,74.908,65.894)
OP2: (36.443,73.954,67.428)
C3': (32.961,76.512,70.402)
C1': (32.926,74.572,71.732)
C5': (32.890,75.124,68.251)
O6: (37.641,71.655,73.847)
O4': (32.556,74.195,70.428)
C8: (35.307,73.961,71.142)
C2: (34.411,72.466,75.121)
C6: (36.504,72.140,73.876)
C5: (35.866,72.897,72.880)
C4: (34.586,73.345,73.119)
P: (35.017,74.112,67.087)
C4': (32.323,75.370,69.628)
C2': (32.883,76.088,71.855)
O2': (31.696,76.446,72.529)
N1: (35.689,71.962,74.991)
N2: (33.773,72.201,76.259)
N3: (33.810,73.173,74.196)
N7: (36.309,73.298,71.640)
N9: (34.237,73.998,71.985)
O5': (34.255,74.714,68.350)
O3': (32.288,77.729,70.146)
OP2: (36.443,73.954,67.428)
C3': (32.961,76.512,70.402)
C1': (32.926,74.572,71.732)
C5': (32.890,75.124,68.251)
O6: (37.641,71.655,73.847)
O4': (32.556,74.195,70.428)
C8: (35.307,73.961,71.142)
C2: (34.411,72.466,75.121)
C6: (36.504,72.140,73.876)
C5: (35.866,72.897,72.880)
C4: (34.586,73.345,73.119)
P: (35.017,74.112,67.087)
C4': (32.323,75.370,69.628)
C2': (32.883,76.088,71.855)
O2': (31.696,76.446,72.529)
N1: (35.689,71.962,74.991)
N2: (33.773,72.201,76.259)
N3: (33.810,73.173,74.196)
N7: (36.309,73.298,71.640)
N9: (34.237,73.998,71.985)
O5': (34.255,74.714,68.350)
O3': (32.288,77.729,70.146)
OP1: (39.308,64.427,83.778)
OP2: (39.882,65.219,81.405)
C3': (35.974,67.799,83.210)
C1': (36.759,69.921,82.496)
C5': (38.212,67.184,84.249)
O4': (37.722,69.372,83.380)
C8: (38.323,69.023,80.714)
O2': (34.602,69.796,83.546)
C6: (37.433,70.627,77.736)
C5: (37.674,70.074,78.995)
C4: (36.870,70.522,80.032)
P: (39.670,65.519,82.843)
C4': (37.152,68.232,84.073)
C2': (35.463,69.123,82.652)
C2: (35.762,71.875,78.715)
N1: (36.455,71.541,77.621)
N3: (35.892,71.427,79.960)
N6: (38.127,70.288,76.654)
N7: (38.582,69.134,79.435)
N9: (37.301,69.827,81.138)
O5': (38.558,66.646,82.981)
O3': (34.993,67.099,83.969)
OP2: (39.882,65.219,81.405)
C3': (35.974,67.799,83.210)
C1': (36.759,69.921,82.496)
C5': (38.212,67.184,84.249)
O4': (37.722,69.372,83.380)
C8: (38.323,69.023,80.714)
O2': (34.602,69.796,83.546)
C6: (37.433,70.627,77.736)
C5: (37.674,70.074,78.995)
C4: (36.870,70.522,80.032)
P: (39.670,65.519,82.843)
C4': (37.152,68.232,84.073)
C2': (35.463,69.123,82.652)
C2: (35.762,71.875,78.715)
N1: (36.455,71.541,77.621)
N3: (35.892,71.427,79.960)
N6: (38.127,70.288,76.654)
N7: (38.582,69.134,79.435)
N9: (37.301,69.827,81.138)
O5': (38.558,66.646,82.981)
O3': (34.993,67.099,83.969)
Image (generated by PyMOL):