ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VC0:B62:B43

Extra

PDB:
ATOM 1 O3' G A 61 35.214 72.631 67.372 1.00 65.68 O
ATOM 2 P G A 62 35.678 74.130 67.683 1.00 64.82 P
ATOM 3 OP1 G A 62 35.237 74.970 66.552 1.00 67.63 O
ATOM 4 OP2 G A 62 37.118 74.058 68.021 1.00 66.87 O
ATOM 5 O5' G A 62 34.835 74.546 68.970 1.00 65.24 O
ATOM 6 C5' G A 62 33.484 74.990 68.842 1.00 67.94 C
ATOM 7 C4' G A 62 32.887 75.241 70.204 1.00 69.81 C
ATOM 8 O4' G A 62 33.104 74.056 70.996 1.00 70.95 O
ATOM 9 C3' G A 62 33.495 76.379 71.010 1.00 71.86 C
ATOM 10 O3' G A 62 32.865 77.622 70.701 1.00 72.00 O
ATOM 11 C2' G A 62 33.348 75.926 72.460 1.00 74.11 C
ATOM 12 O2' G A 62 32.108 76.206 73.084 1.00 79.28 O
ATOM 13 C1' G A 62 33.437 74.412 72.318 1.00 71.28 C
ATOM 14 N9 G A 62 34.750 73.858 72.604 1.00 68.76 N
ATOM 15 C8 G A 62 35.828 73.778 71.763 1.00 66.12 C
ATOM 16 N7 G A 62 36.842 73.157 72.298 1.00 65.76 N
ATOM 17 C5 G A 62 36.404 72.823 73.571 1.00 65.16 C
ATOM 18 C6 G A 62 37.059 72.137 74.616 1.00 64.21 C
ATOM 19 O6 G A 62 38.198 71.667 74.631 1.00 63.11 O
ATOM 20 N1 G A 62 36.247 72.022 75.735 1.00 64.64 N
ATOM 21 C2 G A 62 34.967 72.511 75.835 1.00 63.96 C
ATOM 22 N2 G A 62 34.344 72.310 76.990 1.00 64.33 N
ATOM 23 N3 G A 62 34.349 73.151 74.872 1.00 64.41 N
ATOM 24 C4 G A 62 35.121 73.269 73.778 1.00 66.45 C
ATOM 25 P U A 63 31.262 77.803 70.874 1.00 72.99 P
ATOM 26 OP1 U A 63 30.763 77.680 72.259 1.00 73.09 O
ATOM 27 OP2 U A 63 30.613 77.012 69.802 1.00 76.27 O
ATOM 28 O5' U A 63 31.063 79.335 70.518 1.00 75.63 O
TER

ATOM 1 O3' A B 42 41.604 66.474 84.181 1.00 80.15 O
ATOM 2 P A B 43 40.302 65.685 83.681 1.00 79.75 P
ATOM 3 OP1 A B 43 39.988 64.594 84.640 1.00 80.85 O
ATOM 4 OP2 A B 43 40.534 65.366 82.252 1.00 79.21 O
ATOM 5 O5' A B 43 39.142 66.766 83.787 1.00 78.26 O
ATOM 6 C5' A B 43 38.837 67.395 85.025 1.00 75.33 C
ATOM 7 C4' A B 43 37.780 68.447 84.814 1.00 74.60 C
ATOM 8 O4' A B 43 38.337 69.560 84.077 1.00 74.40 O
ATOM 9 C3' A B 43 36.600 67.989 83.976 1.00 73.82 C
ATOM 10 O3' A B 43 35.631 67.297 84.745 1.00 74.32 O
ATOM 11 C2' A B 43 36.077 69.291 83.392 1.00 73.22 C
ATOM 12 O2' A B 43 35.263 70.003 84.294 1.00 70.32 O
ATOM 13 C1' A B 43 37.373 70.068 83.174 1.00 73.50 C
ATOM 14 N9 A B 43 37.898 69.896 81.824 1.00 74.10 N
ATOM 15 C8 A B 43 38.941 69.094 81.430 1.00 72.98 C
ATOM 16 N7 A B 43 39.184 69.138 80.148 1.00 73.64 N
ATOM 17 C5 A B 43 38.239 70.029 79.660 1.00 74.12 C
ATOM 18 C6 A B 43 37.972 70.502 78.371 1.00 74.13 C
ATOM 19 N6 A B 43 38.663 70.131 77.294 1.00 73.51 N
ATOM 20 N1 A B 43 36.959 71.382 78.224 1.00 75.39 N
ATOM 21 C2 A B 43 36.270 71.756 79.308 1.00 75.64 C
ATOM 22 N3 A B 43 36.429 71.381 80.573 1.00 76.29 N
ATOM 23 C4 A B 43 37.442 70.504 80.681 1.00 74.28 C
ATOM 24 P C B 44 34.756 66.145 84.052 1.00 74.40 P
ATOM 25 OP1 C B 44 33.734 65.713 85.036 1.00 74.80 O
ATOM 26 OP2 C B 44 35.662 65.147 83.434 1.00 75.83 O
ATOM 27 O5' C B 44 33.999 66.901 82.878 1.00 73.08 O
TER

Atoms:
OP1: (35.237,74.970,66.552)
OP2: (37.118,74.058,68.021)
C3': (33.495,76.379,71.010)
C1': (33.437,74.412,72.318)
C5': (33.484,74.990,68.842)
O6: (38.198,71.667,74.631)
O4': (33.104,74.056,70.996)
C8: (35.828,73.778,71.763)
C2: (34.967,72.511,75.835)
C6: (37.059,72.137,74.616)
C5: (36.404,72.823,73.571)
C4: (35.121,73.269,73.778)
P: (35.678,74.130,67.683)
C4': (32.887,75.241,70.204)
C2': (33.348,75.926,72.460)
O2': (32.108,76.206,73.084)
N1: (36.247,72.022,75.735)
N2: (34.344,72.310,76.990)
N3: (34.349,73.151,74.872)
N7: (36.842,73.157,72.298)
N9: (34.750,73.858,72.604)
O5': (34.835,74.546,68.970)
O3': (32.865,77.622,70.701)
OP1: (39.988,64.594,84.640)
OP2: (40.534,65.366,82.252)
C3': (36.600,67.989,83.976)
C1': (37.373,70.068,83.174)
C5': (38.837,67.395,85.025)
O4': (38.337,69.560,84.077)
C8: (38.941,69.094,81.430)
O2': (35.263,70.003,84.294)
C6: (37.972,70.502,78.371)
C5: (38.239,70.029,79.660)
C4: (37.442,70.504,80.681)
P: (40.302,65.685,83.681)
C4': (37.780,68.447,84.814)
C2': (36.077,69.291,83.392)
C2: (36.270,71.756,79.308)
N1: (36.959,71.382,78.224)
N3: (36.429,71.381,80.573)
N6: (38.663,70.131,77.294)
N7: (39.184,69.138,80.148)
N9: (37.898,69.896,81.824)
O5': (39.142,66.766,83.787)
O3': (35.631,67.297,84.745)
Image (generated by PyMOL):
PyMOL image
show in jmol