Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:784:794
Extra
PDB:
ATOM 1 O3' A A 83 116.830 -14.140 272.420 1.00 34.95 O
ATOM 2 P G A 84 117.686 -13.050 271.643 1.00 32.99 P
ATOM 3 OP1 G A 84 116.908 -12.720 270.499 1.00 32.40 O
ATOM 4 OP2 G A 84 119.049 -13.558 271.445 1.00 32.75 O
ATOM 5 O5' G A 84 117.670 -11.837 272.627 1.00 33.57 O
ATOM 6 C5' G A 84 116.504 -11.022 272.648 1.00 33.70 C
ATOM 7 C4' G A 84 116.552 -10.007 273.745 1.00 34.35 C
ATOM 8 O4' G A 84 116.834 -10.668 275.000 1.00 35.05 O
ATOM 9 C3' G A 84 117.616 -8.967 273.640 1.00 34.21 C
ATOM 10 O3' G A 84 117.246 -7.921 272.765 1.00 33.75 O
ATOM 11 C2' G A 84 117.703 -8.522 275.089 1.00 35.06 C
ATOM 12 O2' G A 84 116.554 -7.777 275.420 1.00 35.38 O
ATOM 13 C1' G A 84 117.578 -9.840 275.819 1.00 35.48 C
ATOM 14 N9 G A 84 118.864 -10.511 276.077 1.00 35.50 N
ATOM 15 C8 G A 84 119.588 -11.266 275.194 1.00 34.90 C
ATOM 16 N7 G A 84 120.660 -11.791 275.752 1.00 35.12 N
ATOM 17 C5 G A 84 120.627 -11.389 277.073 1.00 35.90 C
ATOM 18 C6 G A 84 121.475 -11.625 278.160 1.00 36.46 C
ATOM 19 O6 G A 84 122.496 -12.240 278.243 1.00 36.41 O
ATOM 20 N1 G A 84 121.050 -11.067 279.307 1.00 37.19 N
ATOM 21 C2 G A 84 119.960 -10.343 279.445 1.00 37.39 C
ATOM 22 N2 G A 84 119.755 -9.910 280.657 1.00 38.14 N
ATOM 23 N3 G A 84 119.155 -10.057 278.461 1.00 36.88 N
ATOM 24 C4 G A 84 119.518 -10.620 277.292 1.00 36.15 C
ATOM 25 P U A 85 117.857 -7.788 271.272 1.00 30.55 P
ATOM 26 OP1 U A 85 116.738 -7.949 270.352 1.00 30.11 O
ATOM 27 OP2 U A 85 119.008 -8.721 271.148 1.00 30.36 O
ATOM 28 O5' U A 85 118.371 -6.288 271.246 1.00 30.51 O
TER
ATOM 1 O3' C B 93 130.471 -12.757 286.328 1.00 42.43 O
ATOM 2 P A B 94 129.366 -13.890 286.461 1.00 36.44 P
ATOM 3 OP1 A B 94 129.639 -14.668 287.710 1.00 37.16 O
ATOM 4 OP2 A B 94 129.319 -14.612 285.157 1.00 35.66 O
ATOM 5 O5' A B 94 128.062 -13.013 286.618 1.00 36.67 O
ATOM 6 C5' A B 94 127.734 -12.409 287.833 1.00 37.45 C
ATOM 7 C4' A B 94 126.494 -11.598 287.670 1.00 37.48 C
ATOM 8 O4' A B 94 126.594 -10.783 286.483 1.00 36.77 O
ATOM 9 C3' A B 94 125.230 -12.387 287.452 1.00 37.45 C
ATOM 10 O3' A B 94 124.732 -12.915 288.661 1.00 38.22 O
ATOM 11 C2' A B 94 124.331 -11.351 286.821 1.00 37.18 C
ATOM 12 O2' A B 94 123.871 -10.450 287.808 1.00 37.85 O
ATOM 13 C1' A B 94 125.323 -10.607 285.929 1.00 36.56 C
ATOM 14 N9 A B 94 125.335 -11.141 284.572 1.00 35.73 N
ATOM 15 C8 A B 94 126.272 -11.951 284.045 1.00 35.32 C
ATOM 16 N7 A B 94 126.034 -12.278 282.807 1.00 34.60 N
ATOM 17 C5 A B 94 124.857 -11.656 282.524 1.00 34.55 C
ATOM 18 C6 A B 94 124.090 -11.641 281.384 1.00 33.94 C
ATOM 19 N6 A B 94 124.381 -12.296 280.272 1.00 33.24 N
ATOM 20 N1 A B 94 123.004 -10.886 281.432 1.00 34.08 N
ATOM 21 C2 A B 94 122.674 -10.236 282.536 1.00 34.79 C
ATOM 22 N3 A B 94 123.322 -10.195 283.666 1.00 35.40 N
ATOM 23 C4 A B 94 124.425 -10.931 283.587 1.00 35.23 C
ATOM 24 P U B 95 123.838 -14.224 288.668 1.00 36.80 P
ATOM 25 OP1 U B 95 123.504 -14.499 290.071 1.00 37.68 O
ATOM 26 OP2 U B 95 124.550 -15.276 287.848 1.00 36.22 O
ATOM 27 O5' U B 95 122.555 -13.743 287.888 1.00 36.46 O
TER
ATOM 2 P G A 84 117.686 -13.050 271.643 1.00 32.99 P
ATOM 3 OP1 G A 84 116.908 -12.720 270.499 1.00 32.40 O
ATOM 4 OP2 G A 84 119.049 -13.558 271.445 1.00 32.75 O
ATOM 5 O5' G A 84 117.670 -11.837 272.627 1.00 33.57 O
ATOM 6 C5' G A 84 116.504 -11.022 272.648 1.00 33.70 C
ATOM 7 C4' G A 84 116.552 -10.007 273.745 1.00 34.35 C
ATOM 8 O4' G A 84 116.834 -10.668 275.000 1.00 35.05 O
ATOM 9 C3' G A 84 117.616 -8.967 273.640 1.00 34.21 C
ATOM 10 O3' G A 84 117.246 -7.921 272.765 1.00 33.75 O
ATOM 11 C2' G A 84 117.703 -8.522 275.089 1.00 35.06 C
ATOM 12 O2' G A 84 116.554 -7.777 275.420 1.00 35.38 O
ATOM 13 C1' G A 84 117.578 -9.840 275.819 1.00 35.48 C
ATOM 14 N9 G A 84 118.864 -10.511 276.077 1.00 35.50 N
ATOM 15 C8 G A 84 119.588 -11.266 275.194 1.00 34.90 C
ATOM 16 N7 G A 84 120.660 -11.791 275.752 1.00 35.12 N
ATOM 17 C5 G A 84 120.627 -11.389 277.073 1.00 35.90 C
ATOM 18 C6 G A 84 121.475 -11.625 278.160 1.00 36.46 C
ATOM 19 O6 G A 84 122.496 -12.240 278.243 1.00 36.41 O
ATOM 20 N1 G A 84 121.050 -11.067 279.307 1.00 37.19 N
ATOM 21 C2 G A 84 119.960 -10.343 279.445 1.00 37.39 C
ATOM 22 N2 G A 84 119.755 -9.910 280.657 1.00 38.14 N
ATOM 23 N3 G A 84 119.155 -10.057 278.461 1.00 36.88 N
ATOM 24 C4 G A 84 119.518 -10.620 277.292 1.00 36.15 C
ATOM 25 P U A 85 117.857 -7.788 271.272 1.00 30.55 P
ATOM 26 OP1 U A 85 116.738 -7.949 270.352 1.00 30.11 O
ATOM 27 OP2 U A 85 119.008 -8.721 271.148 1.00 30.36 O
ATOM 28 O5' U A 85 118.371 -6.288 271.246 1.00 30.51 O
TER
ATOM 1 O3' C B 93 130.471 -12.757 286.328 1.00 42.43 O
ATOM 2 P A B 94 129.366 -13.890 286.461 1.00 36.44 P
ATOM 3 OP1 A B 94 129.639 -14.668 287.710 1.00 37.16 O
ATOM 4 OP2 A B 94 129.319 -14.612 285.157 1.00 35.66 O
ATOM 5 O5' A B 94 128.062 -13.013 286.618 1.00 36.67 O
ATOM 6 C5' A B 94 127.734 -12.409 287.833 1.00 37.45 C
ATOM 7 C4' A B 94 126.494 -11.598 287.670 1.00 37.48 C
ATOM 8 O4' A B 94 126.594 -10.783 286.483 1.00 36.77 O
ATOM 9 C3' A B 94 125.230 -12.387 287.452 1.00 37.45 C
ATOM 10 O3' A B 94 124.732 -12.915 288.661 1.00 38.22 O
ATOM 11 C2' A B 94 124.331 -11.351 286.821 1.00 37.18 C
ATOM 12 O2' A B 94 123.871 -10.450 287.808 1.00 37.85 O
ATOM 13 C1' A B 94 125.323 -10.607 285.929 1.00 36.56 C
ATOM 14 N9 A B 94 125.335 -11.141 284.572 1.00 35.73 N
ATOM 15 C8 A B 94 126.272 -11.951 284.045 1.00 35.32 C
ATOM 16 N7 A B 94 126.034 -12.278 282.807 1.00 34.60 N
ATOM 17 C5 A B 94 124.857 -11.656 282.524 1.00 34.55 C
ATOM 18 C6 A B 94 124.090 -11.641 281.384 1.00 33.94 C
ATOM 19 N6 A B 94 124.381 -12.296 280.272 1.00 33.24 N
ATOM 20 N1 A B 94 123.004 -10.886 281.432 1.00 34.08 N
ATOM 21 C2 A B 94 122.674 -10.236 282.536 1.00 34.79 C
ATOM 22 N3 A B 94 123.322 -10.195 283.666 1.00 35.40 N
ATOM 23 C4 A B 94 124.425 -10.931 283.587 1.00 35.23 C
ATOM 24 P U B 95 123.838 -14.224 288.668 1.00 36.80 P
ATOM 25 OP1 U B 95 123.504 -14.499 290.071 1.00 37.68 O
ATOM 26 OP2 U B 95 124.550 -15.276 287.848 1.00 36.22 O
ATOM 27 O5' U B 95 122.555 -13.743 287.888 1.00 36.46 O
TER
Atoms:
OP1: (116.908,-12.720,270.499)
OP2: (119.049,-13.558,271.445)
C3': (117.616,-8.967,273.640)
C1': (117.578,-9.840,275.819)
C5': (116.504,-11.022,272.648)
O6: (122.496,-12.240,278.243)
O4': (116.834,-10.668,275.000)
C8: (119.588,-11.266,275.194)
C2: (119.960,-10.343,279.445)
C6: (121.475,-11.625,278.160)
C5: (120.627,-11.389,277.073)
C4: (119.518,-10.620,277.292)
P: (117.686,-13.050,271.643)
C4': (116.552,-10.007,273.745)
C2': (117.703,-8.522,275.089)
O2': (116.554,-7.777,275.420)
N1: (121.050,-11.067,279.307)
N2: (119.755,-9.910,280.657)
N3: (119.155,-10.057,278.461)
N7: (120.660,-11.791,275.752)
N9: (118.864,-10.511,276.077)
O5': (117.670,-11.837,272.627)
O3': (117.246,-7.921,272.765)
OP2: (119.049,-13.558,271.445)
C3': (117.616,-8.967,273.640)
C1': (117.578,-9.840,275.819)
C5': (116.504,-11.022,272.648)
O6: (122.496,-12.240,278.243)
O4': (116.834,-10.668,275.000)
C8: (119.588,-11.266,275.194)
C2: (119.960,-10.343,279.445)
C6: (121.475,-11.625,278.160)
C5: (120.627,-11.389,277.073)
C4: (119.518,-10.620,277.292)
P: (117.686,-13.050,271.643)
C4': (116.552,-10.007,273.745)
C2': (117.703,-8.522,275.089)
O2': (116.554,-7.777,275.420)
N1: (121.050,-11.067,279.307)
N2: (119.755,-9.910,280.657)
N3: (119.155,-10.057,278.461)
N7: (120.660,-11.791,275.752)
N9: (118.864,-10.511,276.077)
O5': (117.670,-11.837,272.627)
O3': (117.246,-7.921,272.765)
OP1: (129.639,-14.668,287.710)
OP2: (129.319,-14.612,285.157)
C3': (125.230,-12.387,287.452)
C1': (125.323,-10.607,285.929)
C5': (127.734,-12.409,287.833)
O4': (126.594,-10.783,286.483)
C8: (126.272,-11.951,284.045)
O2': (123.871,-10.450,287.808)
C6: (124.090,-11.641,281.384)
C5: (124.857,-11.656,282.524)
C4: (124.425,-10.931,283.587)
P: (129.366,-13.890,286.461)
C4': (126.494,-11.598,287.670)
C2': (124.331,-11.351,286.821)
C2: (122.674,-10.236,282.536)
N1: (123.004,-10.886,281.432)
N3: (123.322,-10.195,283.666)
N6: (124.381,-12.296,280.272)
N7: (126.034,-12.278,282.807)
N9: (125.335,-11.141,284.572)
O5': (128.062,-13.013,286.618)
O3': (124.732,-12.915,288.661)
OP2: (129.319,-14.612,285.157)
C3': (125.230,-12.387,287.452)
C1': (125.323,-10.607,285.929)
C5': (127.734,-12.409,287.833)
O4': (126.594,-10.783,286.483)
C8: (126.272,-11.951,284.045)
O2': (123.871,-10.450,287.808)
C6: (124.090,-11.641,281.384)
C5: (124.857,-11.656,282.524)
C4: (124.425,-10.931,283.587)
P: (129.366,-13.890,286.461)
C4': (126.494,-11.598,287.670)
C2': (124.331,-11.351,286.821)
C2: (122.674,-10.236,282.536)
N1: (123.004,-10.886,281.432)
N3: (123.322,-10.195,283.666)
N6: (124.381,-12.296,280.272)
N7: (126.034,-12.278,282.807)
N9: (125.335,-11.141,284.572)
O5': (128.062,-13.013,286.618)
O3': (124.732,-12.915,288.661)
Image (generated by PyMOL):