Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1109:A1032
Extra
PDB:
ATOM 1 O3' G A1108 -129.339 -73.938 -38.919 1.00 16.70 O
ATOM 2 P G A1109 -128.256 -73.267 -37.940 1.00 18.44 P
ATOM 3 OP1 G A1109 -127.820 -71.991 -38.600 1.00 18.44 O
ATOM 4 OP2 G A1109 -127.230 -74.310 -37.628 1.00 18.44 O
ATOM 5 O5' G A1109 -129.111 -72.947 -36.637 1.00 18.44 O
ATOM 6 C5' G A1109 -129.176 -73.874 -35.573 1.00 18.44 C
ATOM 7 C4' G A1109 -130.550 -73.922 -34.971 1.00 18.44 C
ATOM 8 O4' G A1109 -131.466 -74.594 -35.875 1.00 18.44 O
ATOM 9 C3' G A1109 -130.665 -74.717 -33.695 1.00 18.44 C
ATOM 10 O3' G A1109 -130.252 -74.008 -32.582 1.00 18.44 O
ATOM 11 C2' G A1109 -132.121 -75.079 -33.657 1.00 18.44 C
ATOM 12 O2' G A1109 -132.897 -73.951 -33.292 1.00 18.44 O
ATOM 13 C1' G A1109 -132.354 -75.407 -35.127 1.00 18.44 C
ATOM 14 N9 G A1109 -132.029 -76.818 -35.403 1.00 17.82 N
ATOM 15 C8 G A1109 -131.032 -77.281 -36.217 1.00 17.82 C
ATOM 16 N7 G A1109 -130.973 -78.579 -36.226 1.00 17.82 N
ATOM 17 C5 G A1109 -131.980 -78.990 -35.352 1.00 17.82 C
ATOM 18 C6 G A1109 -132.393 -80.289 -34.948 1.00 17.82 C
ATOM 19 O6 G A1109 -131.974 -81.402 -35.269 1.00 17.82 O
ATOM 20 N1 G A1109 -133.423 -80.250 -34.057 1.00 17.82 N
ATOM 21 C2 G A1109 -134.004 -79.120 -33.615 1.00 17.82 C
ATOM 22 N2 G A1109 -135.007 -79.339 -32.755 1.00 17.82 N
ATOM 23 N3 G A1109 -133.640 -77.901 -33.970 1.00 17.82 N
ATOM 24 C4 G A1109 -132.624 -77.912 -34.832 1.00 17.82 C
ATOM 25 P C A1110 -129.102 -74.616 -31.684 1.00 7.58 P
ATOM 26 OP1 C A1110 -128.448 -73.477 -30.985 1.00 7.58 O
ATOM 27 OP2 C A1110 -128.287 -75.483 -32.571 1.00 7.58 O
ATOM 28 O5' C A1110 -129.899 -75.498 -30.641 1.00 7.58 O
TER
ATOM 1 O3' G B1031 -133.701 -91.439 -30.157 1.00 5.82 O
ATOM 2 P A B1032 -134.778 -91.277 -31.345 1.00 2.78 P
ATOM 3 OP1 A B1032 -135.613 -92.508 -31.354 1.00 2.78 O
ATOM 4 OP2 A B1032 -134.034 -90.923 -32.574 1.00 2.78 O
ATOM 5 O5' A B1032 -135.632 -90.031 -30.868 1.00 2.78 O
ATOM 6 C5' A B1032 -135.991 -89.864 -29.520 1.00 2.78 C
ATOM 7 C4' A B1032 -136.693 -88.562 -29.347 1.00 2.78 C
ATOM 8 O4' A B1032 -135.732 -87.498 -29.137 1.00 2.78 O
ATOM 9 C3' A B1032 -137.482 -88.101 -30.555 1.00 2.78 C
ATOM 10 O3' A B1032 -138.740 -88.745 -30.651 1.00 2.78 O
ATOM 11 C2' A B1032 -137.568 -86.601 -30.331 1.00 2.78 C
ATOM 12 O2' A B1032 -138.558 -86.287 -29.361 1.00 2.78 O
ATOM 13 C1' A B1032 -136.182 -86.317 -29.756 1.00 2.78 C
ATOM 14 N9 A B1032 -135.242 -85.989 -30.817 1.00 2.28 N
ATOM 15 C8 A B1032 -134.439 -86.843 -31.505 1.00 2.28 C
ATOM 16 N7 A B1032 -133.743 -86.240 -32.439 1.00 2.28 N
ATOM 17 C5 A B1032 -134.141 -84.917 -32.352 1.00 2.28 C
ATOM 18 C6 A B1032 -133.791 -83.767 -33.059 1.00 2.28 C
ATOM 19 N6 A B1032 -132.901 -83.742 -34.046 1.00 2.28 N
ATOM 20 N1 A B1032 -134.402 -82.623 -32.723 1.00 2.28 N
ATOM 21 C2 A B1032 -135.293 -82.638 -31.736 1.00 2.28 C
ATOM 22 N3 A B1032 -135.701 -83.651 -30.997 1.00 2.28 N
ATOM 23 C4 A B1032 -135.077 -84.766 -31.364 1.00 2.28 C
ATOM 24 P A B1033 -139.747 -88.427 -31.865 1.00 15.21 P
ATOM 25 OP1 A B1033 -141.134 -88.632 -31.340 1.00 15.21 O
ATOM 26 OP2 A B1033 -139.291 -89.234 -33.026 1.00 15.21 O
ATOM 27 O5' A B1033 -139.497 -86.875 -32.141 1.00 15.21 O
TER
ATOM 2 P G A1109 -128.256 -73.267 -37.940 1.00 18.44 P
ATOM 3 OP1 G A1109 -127.820 -71.991 -38.600 1.00 18.44 O
ATOM 4 OP2 G A1109 -127.230 -74.310 -37.628 1.00 18.44 O
ATOM 5 O5' G A1109 -129.111 -72.947 -36.637 1.00 18.44 O
ATOM 6 C5' G A1109 -129.176 -73.874 -35.573 1.00 18.44 C
ATOM 7 C4' G A1109 -130.550 -73.922 -34.971 1.00 18.44 C
ATOM 8 O4' G A1109 -131.466 -74.594 -35.875 1.00 18.44 O
ATOM 9 C3' G A1109 -130.665 -74.717 -33.695 1.00 18.44 C
ATOM 10 O3' G A1109 -130.252 -74.008 -32.582 1.00 18.44 O
ATOM 11 C2' G A1109 -132.121 -75.079 -33.657 1.00 18.44 C
ATOM 12 O2' G A1109 -132.897 -73.951 -33.292 1.00 18.44 O
ATOM 13 C1' G A1109 -132.354 -75.407 -35.127 1.00 18.44 C
ATOM 14 N9 G A1109 -132.029 -76.818 -35.403 1.00 17.82 N
ATOM 15 C8 G A1109 -131.032 -77.281 -36.217 1.00 17.82 C
ATOM 16 N7 G A1109 -130.973 -78.579 -36.226 1.00 17.82 N
ATOM 17 C5 G A1109 -131.980 -78.990 -35.352 1.00 17.82 C
ATOM 18 C6 G A1109 -132.393 -80.289 -34.948 1.00 17.82 C
ATOM 19 O6 G A1109 -131.974 -81.402 -35.269 1.00 17.82 O
ATOM 20 N1 G A1109 -133.423 -80.250 -34.057 1.00 17.82 N
ATOM 21 C2 G A1109 -134.004 -79.120 -33.615 1.00 17.82 C
ATOM 22 N2 G A1109 -135.007 -79.339 -32.755 1.00 17.82 N
ATOM 23 N3 G A1109 -133.640 -77.901 -33.970 1.00 17.82 N
ATOM 24 C4 G A1109 -132.624 -77.912 -34.832 1.00 17.82 C
ATOM 25 P C A1110 -129.102 -74.616 -31.684 1.00 7.58 P
ATOM 26 OP1 C A1110 -128.448 -73.477 -30.985 1.00 7.58 O
ATOM 27 OP2 C A1110 -128.287 -75.483 -32.571 1.00 7.58 O
ATOM 28 O5' C A1110 -129.899 -75.498 -30.641 1.00 7.58 O
TER
ATOM 1 O3' G B1031 -133.701 -91.439 -30.157 1.00 5.82 O
ATOM 2 P A B1032 -134.778 -91.277 -31.345 1.00 2.78 P
ATOM 3 OP1 A B1032 -135.613 -92.508 -31.354 1.00 2.78 O
ATOM 4 OP2 A B1032 -134.034 -90.923 -32.574 1.00 2.78 O
ATOM 5 O5' A B1032 -135.632 -90.031 -30.868 1.00 2.78 O
ATOM 6 C5' A B1032 -135.991 -89.864 -29.520 1.00 2.78 C
ATOM 7 C4' A B1032 -136.693 -88.562 -29.347 1.00 2.78 C
ATOM 8 O4' A B1032 -135.732 -87.498 -29.137 1.00 2.78 O
ATOM 9 C3' A B1032 -137.482 -88.101 -30.555 1.00 2.78 C
ATOM 10 O3' A B1032 -138.740 -88.745 -30.651 1.00 2.78 O
ATOM 11 C2' A B1032 -137.568 -86.601 -30.331 1.00 2.78 C
ATOM 12 O2' A B1032 -138.558 -86.287 -29.361 1.00 2.78 O
ATOM 13 C1' A B1032 -136.182 -86.317 -29.756 1.00 2.78 C
ATOM 14 N9 A B1032 -135.242 -85.989 -30.817 1.00 2.28 N
ATOM 15 C8 A B1032 -134.439 -86.843 -31.505 1.00 2.28 C
ATOM 16 N7 A B1032 -133.743 -86.240 -32.439 1.00 2.28 N
ATOM 17 C5 A B1032 -134.141 -84.917 -32.352 1.00 2.28 C
ATOM 18 C6 A B1032 -133.791 -83.767 -33.059 1.00 2.28 C
ATOM 19 N6 A B1032 -132.901 -83.742 -34.046 1.00 2.28 N
ATOM 20 N1 A B1032 -134.402 -82.623 -32.723 1.00 2.28 N
ATOM 21 C2 A B1032 -135.293 -82.638 -31.736 1.00 2.28 C
ATOM 22 N3 A B1032 -135.701 -83.651 -30.997 1.00 2.28 N
ATOM 23 C4 A B1032 -135.077 -84.766 -31.364 1.00 2.28 C
ATOM 24 P A B1033 -139.747 -88.427 -31.865 1.00 15.21 P
ATOM 25 OP1 A B1033 -141.134 -88.632 -31.340 1.00 15.21 O
ATOM 26 OP2 A B1033 -139.291 -89.234 -33.026 1.00 15.21 O
ATOM 27 O5' A B1033 -139.497 -86.875 -32.141 1.00 15.21 O
TER
Atoms:
OP1: (-127.820,-71.991,-38.600)
OP2: (-127.230,-74.310,-37.628)
C3': (-130.665,-74.717,-33.695)
C1': (-132.354,-75.407,-35.127)
C5': (-129.176,-73.874,-35.573)
O6: (-131.974,-81.402,-35.269)
O4': (-131.466,-74.594,-35.875)
C8: (-131.032,-77.281,-36.217)
C2: (-134.004,-79.120,-33.615)
C6: (-132.393,-80.289,-34.948)
C5: (-131.980,-78.990,-35.352)
C4: (-132.624,-77.912,-34.832)
P: (-128.256,-73.267,-37.940)
C4': (-130.550,-73.922,-34.971)
C2': (-132.121,-75.079,-33.657)
O2': (-132.897,-73.951,-33.292)
N1: (-133.423,-80.250,-34.057)
N2: (-135.007,-79.339,-32.755)
N3: (-133.640,-77.901,-33.970)
N7: (-130.973,-78.579,-36.226)
N9: (-132.029,-76.818,-35.403)
O5': (-129.111,-72.947,-36.637)
O3': (-130.252,-74.008,-32.582)
OP2: (-127.230,-74.310,-37.628)
C3': (-130.665,-74.717,-33.695)
C1': (-132.354,-75.407,-35.127)
C5': (-129.176,-73.874,-35.573)
O6: (-131.974,-81.402,-35.269)
O4': (-131.466,-74.594,-35.875)
C8: (-131.032,-77.281,-36.217)
C2: (-134.004,-79.120,-33.615)
C6: (-132.393,-80.289,-34.948)
C5: (-131.980,-78.990,-35.352)
C4: (-132.624,-77.912,-34.832)
P: (-128.256,-73.267,-37.940)
C4': (-130.550,-73.922,-34.971)
C2': (-132.121,-75.079,-33.657)
O2': (-132.897,-73.951,-33.292)
N1: (-133.423,-80.250,-34.057)
N2: (-135.007,-79.339,-32.755)
N3: (-133.640,-77.901,-33.970)
N7: (-130.973,-78.579,-36.226)
N9: (-132.029,-76.818,-35.403)
O5': (-129.111,-72.947,-36.637)
O3': (-130.252,-74.008,-32.582)
OP1: (-135.613,-92.508,-31.354)
OP2: (-134.034,-90.923,-32.574)
C3': (-137.482,-88.101,-30.555)
C1': (-136.182,-86.317,-29.756)
C5': (-135.991,-89.864,-29.520)
O4': (-135.732,-87.498,-29.137)
C8: (-134.439,-86.843,-31.505)
O2': (-138.558,-86.287,-29.361)
C6: (-133.791,-83.767,-33.059)
C5: (-134.141,-84.917,-32.352)
C4: (-135.077,-84.766,-31.364)
P: (-134.778,-91.277,-31.345)
C4': (-136.693,-88.562,-29.347)
C2': (-137.568,-86.601,-30.331)
C2: (-135.293,-82.638,-31.736)
N1: (-134.402,-82.623,-32.723)
N3: (-135.701,-83.651,-30.997)
N6: (-132.901,-83.742,-34.046)
N7: (-133.743,-86.240,-32.439)
N9: (-135.242,-85.989,-30.817)
O5': (-135.632,-90.031,-30.868)
O3': (-138.740,-88.745,-30.651)
OP2: (-134.034,-90.923,-32.574)
C3': (-137.482,-88.101,-30.555)
C1': (-136.182,-86.317,-29.756)
C5': (-135.991,-89.864,-29.520)
O4': (-135.732,-87.498,-29.137)
C8: (-134.439,-86.843,-31.505)
O2': (-138.558,-86.287,-29.361)
C6: (-133.791,-83.767,-33.059)
C5: (-134.141,-84.917,-32.352)
C4: (-135.077,-84.766,-31.364)
P: (-134.778,-91.277,-31.345)
C4': (-136.693,-88.562,-29.347)
C2': (-137.568,-86.601,-30.331)
C2: (-135.293,-82.638,-31.736)
N1: (-134.402,-82.623,-32.723)
N3: (-135.701,-83.651,-30.997)
N6: (-132.901,-83.742,-34.046)
N7: (-133.743,-86.240,-32.439)
N9: (-135.242,-85.989,-30.817)
O5': (-135.632,-90.031,-30.868)
O3': (-138.740,-88.745,-30.651)
Image (generated by PyMOL):